RNA–Protein interactions for RNA: ENST00000487576.1

LPIN1-218, Transcript of lipin 1, humanhuman

TSL 2

Gene LPIN1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-218ENST00000487576 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
LPIN1-218ENST00000487576 ABCC9O60706 1549 aa19.41■□□□□ 0.7
LPIN1-218ENST00000487576 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
LPIN1-218ENST00000487576 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
LPIN1-218ENST00000487576 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
LPIN1-218ENST00000487576 NACADO15069 1562 aa18.08■□□□□ 0.49
LPIN1-218ENST00000487576 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
LPIN1-218ENST00000487576 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LPIN1-218ENST00000487576 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
LPIN1-218ENST00000487576 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
LPIN1-218ENST00000487576 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
LPIN1-218ENST00000487576 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
LPIN1-218ENST00000487576 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
LPIN1-218ENST00000487576 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
LPIN1-218ENST00000487576 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
LPIN1-218ENST00000487576 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
LPIN1-218ENST00000487576 DCAF1Q9Y4B6 1507 aa17.41■□□□□ 0.38
LPIN1-218ENST00000487576 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
LPIN1-218ENST00000487576 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
LPIN1-218ENST00000487576 CUX2O14529 1486 aa16.79■□□□□ 0.28
LPIN1-218ENST00000487576 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
LPIN1-218ENST00000487576 NCAPD3P42695 1498 aa16.72■□□□□ 0.27
LPIN1-218ENST00000487576 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
LPIN1-218ENST00000487576 NESP48681 1621 aa16.6■□□□□ 0.25
LPIN1-218ENST00000487576 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
LPIN1-218ENST00000487576 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
LPIN1-218ENST00000487576 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
LPIN1-218ENST00000487576 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
LPIN1-218ENST00000487576 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
LPIN1-218ENST00000487576 BAZ1AQ9NRL2 1556 aaPredicted RBP16.42■□□□□ 0.22
LPIN1-218ENST00000487576 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
LPIN1-218ENST00000487576 LAMC3Q9Y6N6 1575 aa16.36■□□□□ 0.21
LPIN1-218ENST00000487576 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
LPIN1-218ENST00000487576 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
LPIN1-218ENST00000487576 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
LPIN1-218ENST00000487576 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
LPIN1-218ENST00000487576 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
LPIN1-218ENST00000487576 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
LPIN1-218ENST00000487576 WDR62O43379 1518 aa16.16■□□□□ 0.18
LPIN1-218ENST00000487576 WIZO95785 1651 aa16.08■□□□□ 0.17
LPIN1-218ENST00000487576 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
LPIN1-218ENST00000487576 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
LPIN1-218ENST00000487576 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
LPIN1-218ENST00000487576 CFTRP13569 1480 aa15.97■□□□□ 0.15
LPIN1-218ENST00000487576 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
LPIN1-218ENST00000487576 RSF1Q96T23 1441 aaPredicted RBP15.87■□□□□ 0.13
LPIN1-218ENST00000487576 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
LPIN1-218ENST00000487576 RIMBP3CA6NJZ7 1639 aa15.81■□□□□ 0.12
LPIN1-218ENST00000487576 RIMBP3BA6NNM3 1639 aa15.81■□□□□ 0.12
LPIN1-218ENST00000487576 RIMBP3Q9UFD9 1639 aa15.81■□□□□ 0.12
LPIN1-218ENST00000487576 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
LPIN1-218ENST00000487576 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
LPIN1-218ENST00000487576 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
LPIN1-218ENST00000487576 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
LPIN1-218ENST00000487576 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
LPIN1-218ENST00000487576 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
LPIN1-218ENST00000487576 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
LPIN1-218ENST00000487576 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
LPIN1-218ENST00000487576 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.09
LPIN1-218ENST00000487576 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
LPIN1-218ENST00000487576 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
LPIN1-218ENST00000487576 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
LPIN1-218ENST00000487576 CHD1O14646 1710 aa15.58■□□□□ 0.08
LPIN1-218ENST00000487576 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
LPIN1-218ENST00000487576 FBLN2P98095 1184 aa15.57■□□□□ 0.08
LPIN1-218ENST00000487576 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
LPIN1-218ENST00000487576 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
LPIN1-218ENST00000487576 RAD54L2Q9Y4B4 1467 aa15.51■□□□□ 0.07
LPIN1-218ENST00000487576 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
LPIN1-218ENST00000487576 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
LPIN1-218ENST00000487576 SOGA1O94964 1423 aa15.44■□□□□ 0.06
LPIN1-218ENST00000487576 CLASP1Q7Z460 1538 aa15.42■□□□□ 0.06
LPIN1-218ENST00000487576 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
LPIN1-218ENST00000487576 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
LPIN1-218ENST00000487576 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
LPIN1-218ENST00000487576 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
LPIN1-218ENST00000487576 CUX1P39880 1505 aa15.35■□□□□ 0.05
LPIN1-218ENST00000487576 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
LPIN1-218ENST00000487576 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
LPIN1-218ENST00000487576 SYNJ2O15056 1496 aa15.33■□□□□ 0.04
LPIN1-218ENST00000487576 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
LPIN1-218ENST00000487576 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
LPIN1-218ENST00000487576 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
LPIN1-218ENST00000487576 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
LPIN1-218ENST00000487576 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
LPIN1-218ENST00000487576 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
LPIN1-218ENST00000487576 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
LPIN1-218ENST00000487576 CEP170Q5SW79 1584 aa15.12■□□□□ 0.01
LPIN1-218ENST00000487576 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
LPIN1-218ENST00000487576 NUP160Q12769 1436 aa15.11■□□□□ 0.01
LPIN1-218ENST00000487576 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
LPIN1-218ENST00000487576 SHROOM2Q13796 1616 aa15.05■□□□□ -0
LPIN1-218ENST00000487576 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
LPIN1-218ENST00000487576 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
LPIN1-218ENST00000487576 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
LPIN1-218ENST00000487576 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
LPIN1-218ENST00000487576 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
LPIN1-218ENST00000487576 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
LPIN1-218ENST00000487576 KIF13AQ9H1H9 1805 aa14.97□□□□□ -0.01
LPIN1-218ENST00000487576 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms