RNA–Protein interactions for RNA: ENST00000487574.1

PSD4-211, Transcript of pleckstrin and Sec7 domain containing 4, humanhuman

TSL 4

Gene PSD4, Length 670 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4-211ENST00000487574 NISCHQ9Y2I1 1504 aa44■■■■■ 4.63
PSD4-211ENST00000487574 ABCC9O60706 1549 aa39.46■■■■□ 3.91
PSD4-211ENST00000487574 CCDC180Q9P1Z9 1646 aa39.46■■■■□ 3.91
PSD4-211ENST00000487574 RB1CC1Q8TDY2 1594 aa37.55■■■■□ 3.6
PSD4-211ENST00000487574 NACADO15069 1562 aa37.31■■■■□ 3.56
PSD4-211ENST00000487574 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
PSD4-211ENST00000487574 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
PSD4-211ENST00000487574 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
PSD4-211ENST00000487574 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
PSD4-211ENST00000487574 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
PSD4-211ENST00000487574 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
PSD4-211ENST00000487574 BICRAQ9NZM4 1560 aa36.48■■■■□ 3.43
PSD4-211ENST00000487574 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
PSD4-211ENST00000487574 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
PSD4-211ENST00000487574 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
PSD4-211ENST00000487574 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
PSD4-211ENST00000487574 EIF4G1Q04637 1599 aaKnown RBP35.57■■■■□ 3.28
PSD4-211ENST00000487574 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
PSD4-211ENST00000487574 NCAPD3P42695 1498 aa34.46■■■■□ 3.11
PSD4-211ENST00000487574 ATAD2BQ9ULI0 1458 aa34.35■■■■□ 3.09
PSD4-211ENST00000487574 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
PSD4-211ENST00000487574 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
PSD4-211ENST00000487574 HMGXB3Q12766 1538 aa34.2■■■■□ 3.06
PSD4-211ENST00000487574 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
PSD4-211ENST00000487574 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
PSD4-211ENST00000487574 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.04
PSD4-211ENST00000487574 CUX2O14529 1486 aa34■■■■□ 3.03
PSD4-211ENST00000487574 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
PSD4-211ENST00000487574 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
PSD4-211ENST00000487574 NESP48681 1621 aa33.91■■■■□ 3.02
PSD4-211ENST00000487574 MROH2BQ7Z745 1585 aa33.91■■■■□ 3.02
PSD4-211ENST00000487574 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
PSD4-211ENST00000487574 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
PSD4-211ENST00000487574 WIZO95785 1651 aa33.48■■■□□ 2.95
PSD4-211ENST00000487574 PDS5BQ9NTI5 1447 aa33.46■■■□□ 2.95
PSD4-211ENST00000487574 KIF21AQ7Z4S6 1674 aa33.45■■■□□ 2.94
PSD4-211ENST00000487574 CADPSQ9ULU8 1353 aa33.4■■■□□ 2.94
PSD4-211ENST00000487574 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
PSD4-211ENST00000487574 MRC2Q9UBG0 1479 aa33.19■■■□□ 2.9
PSD4-211ENST00000487574 WDR62O43379 1518 aa33.11■■■□□ 2.89
PSD4-211ENST00000487574 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
PSD4-211ENST00000487574 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
PSD4-211ENST00000487574 CFTRP13569 1480 aa33.03■■■□□ 2.88
PSD4-211ENST00000487574 FANCD2Q9BXW9 1451 aa33.03■■■□□ 2.88
PSD4-211ENST00000487574 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
PSD4-211ENST00000487574 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
PSD4-211ENST00000487574 PRDM2Q13029 1718 aa32.65■■■□□ 2.82
PSD4-211ENST00000487574 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
PSD4-211ENST00000487574 OSCARQ8IYS5 282 aa32.44■■■□□ 2.78
PSD4-211ENST00000487574 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
PSD4-211ENST00000487574 IFT140Q96RY7 1462 aa32.4■■■□□ 2.78
PSD4-211ENST00000487574 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
PSD4-211ENST00000487574 ABCC8Q09428 1581 aa32.32■■■□□ 2.76
PSD4-211ENST00000487574 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
PSD4-211ENST00000487574 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
PSD4-211ENST00000487574 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
PSD4-211ENST00000487574 POLA1P09884 1462 aaPredicted RBP32.08■■■□□ 2.73
PSD4-211ENST00000487574 AQRO60306 1485 aaKnown RBP eCLIP32.05■■■□□ 2.725e-8■■■□□ 18.6
PSD4-211ENST00000487574 RIMBP3CA6NJZ7 1639 aa32.03■■■□□ 2.72
PSD4-211ENST00000487574 RIMBP3BA6NNM3 1639 aa32.03■■■□□ 2.72
PSD4-211ENST00000487574 RIMBP3Q9UFD9 1639 aa32.03■■■□□ 2.72
PSD4-211ENST00000487574 RAD54L2Q9Y4B4 1467 aa31.97■■■□□ 2.71
PSD4-211ENST00000487574 ARHGEF11O15085 1522 aa31.94■■■□□ 2.7
PSD4-211ENST00000487574 SOGA1O94964 1423 aa31.92■■■□□ 2.7
PSD4-211ENST00000487574 CHD1O14646 1710 aa31.91■■■□□ 2.7
PSD4-211ENST00000487574 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
PSD4-211ENST00000487574 TDRD9Q8NDG6 1382 aaKnown RBP31.87■■■□□ 2.69
PSD4-211ENST00000487574 CUX1P39880 1505 aa31.86■■■□□ 2.69
PSD4-211ENST00000487574 FBLN2P98095 1184 aa31.83■■■□□ 2.69
PSD4-211ENST00000487574 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
PSD4-211ENST00000487574 SUPT5HO00267 1087 aaKnown RBP31.75■■■□□ 2.67
PSD4-211ENST00000487574 SNAPC4Q5SXM2 1469 aa31.74■■■□□ 2.67
PSD4-211ENST00000487574 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
PSD4-211ENST00000487574 GRIN2BQ13224 1484 aa31.65■■■□□ 2.66
PSD4-211ENST00000487574 MAGI1Q96QZ7 1491 aaPredicted RBP31.65■■■□□ 2.66
PSD4-211ENST00000487574 ARAP1Q96P48 1450 aa31.63■■■□□ 2.65
PSD4-211ENST00000487574 CHMP7Q8WUX9 453 aaPredicted RBP31.6■■■□□ 2.65
PSD4-211ENST00000487574 CLASP1Q7Z460 1538 aa31.57■■■□□ 2.64
PSD4-211ENST00000487574 SYNJ2O15056 1496 aa31.54■■■□□ 2.64
PSD4-211ENST00000487574 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
PSD4-211ENST00000487574 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
PSD4-211ENST00000487574 ABCA10Q8WWZ4 1543 aa31.52■■■□□ 2.64
PSD4-211ENST00000487574 PBRM1Q86U86 1689 aa31.51■■■□□ 2.63
PSD4-211ENST00000487574 ABCA5Q8WWZ7 1642 aa31.47■■■□□ 2.63
PSD4-211ENST00000487574 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.62
PSD4-211ENST00000487574 TOP2BQ02880 1626 aa31.34■■■□□ 2.61
PSD4-211ENST00000487574 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
PSD4-211ENST00000487574 TRHP20396 242 aaPredicted RBP31.33■■■□□ 2.61
PSD4-211ENST00000487574 GRIN2AQ12879 1464 aa31.24■■■□□ 2.59
PSD4-211ENST00000487574 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
PSD4-211ENST00000487574 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
PSD4-211ENST00000487574 NUP160Q12769 1436 aa31.15■■■□□ 2.58
PSD4-211ENST00000487574 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
PSD4-211ENST00000487574 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
PSD4-211ENST00000487574 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
PSD4-211ENST00000487574 SHROOM2Q13796 1616 aa31■■■□□ 2.55
PSD4-211ENST00000487574 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
PSD4-211ENST00000487574 JPH4Q96JJ6 628 aa30.81■■■□□ 2.52
PSD4-211ENST00000487574 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
PSD4-211ENST00000487574 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms