RNA–Protein interactions for RNA: ENST00000487560.1

C2orf42-213, Transcript of chromosome 2 open reading frame 42, humanhuman

TSL 4

Gene C2orf42, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf42-213ENST00000487560 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.59
C2orf42-213ENST00000487560 ABCC9O60706 1549 aa38.49■■■■□ 3.75
C2orf42-213ENST00000487560 CCDC180Q9P1Z9 1646 aa38.48■■■■□ 3.75
C2orf42-213ENST00000487560 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
C2orf42-213ENST00000487560 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
C2orf42-213ENST00000487560 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
C2orf42-213ENST00000487560 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
C2orf42-213ENST00000487560 NACADO15069 1562 aa36.22■■■■□ 3.39
C2orf42-213ENST00000487560 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
C2orf42-213ENST00000487560 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
C2orf42-213ENST00000487560 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
C2orf42-213ENST00000487560 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
C2orf42-213ENST00000487560 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
C2orf42-213ENST00000487560 SCRIBQ14160 1630 aa35■■■■□ 3.19
C2orf42-213ENST00000487560 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
C2orf42-213ENST00000487560 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
C2orf42-213ENST00000487560 CECR2Q9BXF3 1484 aa34.73■■■■□ 3.15
C2orf42-213ENST00000487560 EIF4G1Q04637 1599 aaKnown RBP34.6■■■■□ 3.13
C2orf42-213ENST00000487560 BAZ1AQ9NRL2 1556 aaPredicted RBP33.79■■■■□ 3
C2orf42-213ENST00000487560 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
C2orf42-213ENST00000487560 DNAJC5Q9H3Z4 198 aa33.68■■■□□ 2.98
C2orf42-213ENST00000487560 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
C2orf42-213ENST00000487560 MROH2BQ7Z745 1585 aa33.67■■■□□ 2.98
C2orf42-213ENST00000487560 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
C2orf42-213ENST00000487560 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
C2orf42-213ENST00000487560 NCAPD3P42695 1498 aa33.41■■■□□ 2.94
C2orf42-213ENST00000487560 WIZO95785 1651 aa33.4■■■□□ 2.94
C2orf42-213ENST00000487560 CUX2O14529 1486 aa33.36■■■□□ 2.93
C2orf42-213ENST00000487560 ERCC6Q03468 1493 aa33.34■■■□□ 2.93
C2orf42-213ENST00000487560 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
C2orf42-213ENST00000487560 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
C2orf42-213ENST00000487560 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
C2orf42-213ENST00000487560 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
C2orf42-213ENST00000487560 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
C2orf42-213ENST00000487560 NESP48681 1621 aa32.93■■■□□ 2.86
C2orf42-213ENST00000487560 LAMC3Q9Y6N6 1575 aa32.73■■■□□ 2.83
C2orf42-213ENST00000487560 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
C2orf42-213ENST00000487560 CCDC88BA6NC98 1476 aa32.66■■■□□ 2.82
C2orf42-213ENST00000487560 PDS5BQ9NTI5 1447 aa32.6■■■□□ 2.81
C2orf42-213ENST00000487560 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
C2orf42-213ENST00000487560 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
C2orf42-213ENST00000487560 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
C2orf42-213ENST00000487560 PRDM2Q13029 1718 aa32.2■■■□□ 2.75
C2orf42-213ENST00000487560 WDR62O43379 1518 aa32.19■■■□□ 2.74
C2orf42-213ENST00000487560 CFTRP13569 1480 aa32.12■■■□□ 2.73
C2orf42-213ENST00000487560 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
C2orf42-213ENST00000487560 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
C2orf42-213ENST00000487560 CHIC1Q5VXU3 224 aa32.05■■■□□ 2.72
C2orf42-213ENST00000487560 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
C2orf42-213ENST00000487560 OSCARQ8IYS5 282 aa31.83■■■□□ 2.69
C2orf42-213ENST00000487560 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
C2orf42-213ENST00000487560 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
C2orf42-213ENST00000487560 WRNQ14191 1432 aaPredicted RBP eCLIP31.68■■■□□ 2.66
C2orf42-213ENST00000487560 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
C2orf42-213ENST00000487560 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
C2orf42-213ENST00000487560 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
C2orf42-213ENST00000487560 CUX1P39880 1505 aa31.53■■■□□ 2.64
C2orf42-213ENST00000487560 IFT140Q96RY7 1462 aa31.49■■■□□ 2.63
C2orf42-213ENST00000487560 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
C2orf42-213ENST00000487560 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.61
C2orf42-213ENST00000487560 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
C2orf42-213ENST00000487560 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
C2orf42-213ENST00000487560 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
C2orf42-213ENST00000487560 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
C2orf42-213ENST00000487560 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
C2orf42-213ENST00000487560 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
C2orf42-213ENST00000487560 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
C2orf42-213ENST00000487560 EEA1Q15075 1411 aa31.18■■■□□ 2.58
C2orf42-213ENST00000487560 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
C2orf42-213ENST00000487560 SOGA1O94964 1423 aa31.1■■■□□ 2.57
C2orf42-213ENST00000487560 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
C2orf42-213ENST00000487560 CYB5RLQ6IPT4 315 aa31.09■■■□□ 2.57
C2orf42-213ENST00000487560 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
C2orf42-213ENST00000487560 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
C2orf42-213ENST00000487560 FBLN2P98095 1184 aa31.06■■■□□ 2.56
C2orf42-213ENST00000487560 CHD1O14646 1710 aa31.04■■■□□ 2.56
C2orf42-213ENST00000487560 RUSC2Q8N2Y8 1516 aa31.02■■■□□ 2.56
C2orf42-213ENST00000487560 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
C2orf42-213ENST00000487560 KIF27Q86VH2 1401 aa30.91■■■□□ 2.54
C2orf42-213ENST00000487560 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
C2orf42-213ENST00000487560 TRHP20396 242 aaPredicted RBP30.9■■■□□ 2.54
C2orf42-213ENST00000487560 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
C2orf42-213ENST00000487560 ARAP1Q96P48 1450 aa30.88■■■□□ 2.53
C2orf42-213ENST00000487560 KIF21BO75037 1637 aa30.85■■■□□ 2.53
C2orf42-213ENST00000487560 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
C2orf42-213ENST00000487560 FAM9AQ8IZU1 332 aaPredicted RBP30.82■■■□□ 2.52
C2orf42-213ENST00000487560 CSRNP3Q8WYN3 585 aa30.82■■■□□ 2.52
C2orf42-213ENST00000487560 CHMP7Q8WUX9 453 aaPredicted RBP30.79■■■□□ 2.52
C2orf42-213ENST00000487560 SNAPC4Q5SXM2 1469 aa30.78■■■□□ 2.52
C2orf42-213ENST00000487560 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
C2orf42-213ENST00000487560 PRXQ9BXM0 1461 aa30.71■■■□□ 2.51
C2orf42-213ENST00000487560 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
C2orf42-213ENST00000487560 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
C2orf42-213ENST00000487560 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
C2orf42-213ENST00000487560 CUL7Q14999 1698 aa30.66■■■□□ 2.5
C2orf42-213ENST00000487560 IGF1RP08069 1367 aa30.66■■■□□ 2.5
C2orf42-213ENST00000487560 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
C2orf42-213ENST00000487560 GOLGA3Q08378 1498 aa30.64■■■□□ 2.5
C2orf42-213ENST00000487560 LOC105371045A0A1W2PR82 267 aa30.64■■■□□ 2.5
C2orf42-213ENST00000487560 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms