RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
SGIP1-212ENST00000487507 ABCC9O60706 1549 aa30.36■■■□□ 2.45
SGIP1-212ENST00000487507 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
SGIP1-212ENST00000487507 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
SGIP1-212ENST00000487507 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
SGIP1-212ENST00000487507 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
SGIP1-212ENST00000487507 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
SGIP1-212ENST00000487507 NACADO15069 1562 aa27.9■■■□□ 2.06
SGIP1-212ENST00000487507 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
SGIP1-212ENST00000487507 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
SGIP1-212ENST00000487507 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
SGIP1-212ENST00000487507 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
SGIP1-212ENST00000487507 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
SGIP1-212ENST00000487507 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
SGIP1-212ENST00000487507 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
SGIP1-212ENST00000487507 SHROOM4Q9ULL8 1493 aa26.94■■□□□ 1.9
SGIP1-212ENST00000487507 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
SGIP1-212ENST00000487507 ZCCHC6Q5VYS8 1495 aaKnown RBP26.46■■□□□ 1.83
SGIP1-212ENST00000487507 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
SGIP1-212ENST00000487507 CUX2O14529 1486 aa26.41■■□□□ 1.82
SGIP1-212ENST00000487507 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
SGIP1-212ENST00000487507 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
SGIP1-212ENST00000487507 NESP48681 1621 aa25.82■■□□□ 1.72
SGIP1-212ENST00000487507 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
SGIP1-212ENST00000487507 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
SGIP1-212ENST00000487507 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
SGIP1-212ENST00000487507 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
SGIP1-212ENST00000487507 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
SGIP1-212ENST00000487507 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
SGIP1-212ENST00000487507 SMARCA4P51532 1647 aa25.4■■□□□ 1.66
SGIP1-212ENST00000487507 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
SGIP1-212ENST00000487507 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
SGIP1-212ENST00000487507 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
SGIP1-212ENST00000487507 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
SGIP1-212ENST00000487507 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
SGIP1-212ENST00000487507 WDR62O43379 1518 aa25.07■■□□□ 1.6
SGIP1-212ENST00000487507 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
SGIP1-212ENST00000487507 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
SGIP1-212ENST00000487507 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
SGIP1-212ENST00000487507 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
SGIP1-212ENST00000487507 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
SGIP1-212ENST00000487507 CADPSQ9ULU8 1353 aa24.92■■□□□ 1.58
SGIP1-212ENST00000487507 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
SGIP1-212ENST00000487507 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
SGIP1-212ENST00000487507 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
SGIP1-212ENST00000487507 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
SGIP1-212ENST00000487507 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
SGIP1-212ENST00000487507 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
SGIP1-212ENST00000487507 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
SGIP1-212ENST00000487507 WIZO95785 1651 aa24.62■■□□□ 1.53
SGIP1-212ENST00000487507 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
SGIP1-212ENST00000487507 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
SGIP1-212ENST00000487507 CHD1O14646 1710 aa24.45■■□□□ 1.5
SGIP1-212ENST00000487507 CFTRP13569 1480 aa24.44■■□□□ 1.5
SGIP1-212ENST00000487507 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
SGIP1-212ENST00000487507 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
SGIP1-212ENST00000487507 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
SGIP1-212ENST00000487507 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
SGIP1-212ENST00000487507 FBLN2P98095 1184 aa24.22■■□□□ 1.47
SGIP1-212ENST00000487507 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
SGIP1-212ENST00000487507 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
SGIP1-212ENST00000487507 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.45
SGIP1-212ENST00000487507 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
SGIP1-212ENST00000487507 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
SGIP1-212ENST00000487507 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
SGIP1-212ENST00000487507 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
SGIP1-212ENST00000487507 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
SGIP1-212ENST00000487507 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
SGIP1-212ENST00000487507 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
SGIP1-212ENST00000487507 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
SGIP1-212ENST00000487507 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
SGIP1-212ENST00000487507 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
SGIP1-212ENST00000487507 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
SGIP1-212ENST00000487507 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
SGIP1-212ENST00000487507 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
SGIP1-212ENST00000487507 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
SGIP1-212ENST00000487507 SOGA1O94964 1423 aa23.69■■□□□ 1.38
SGIP1-212ENST00000487507 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
SGIP1-212ENST00000487507 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
SGIP1-212ENST00000487507 PBRM1Q86U86 1689 aa23.64■■□□□ 1.37
SGIP1-212ENST00000487507 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
SGIP1-212ENST00000487507 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
SGIP1-212ENST00000487507 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
SGIP1-212ENST00000487507 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
SGIP1-212ENST00000487507 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
SGIP1-212ENST00000487507 KDM4FA0A1W2PPD8 638 aa23.42■■□□□ 1.34
SGIP1-212ENST00000487507 CEP170Q5SW79 1584 aa23.42■■□□□ 1.34
SGIP1-212ENST00000487507 CUX1P39880 1505 aa23.41■■□□□ 1.34
SGIP1-212ENST00000487507 TSPOAP1O95153 1857 aa23.35■■□□□ 1.33
SGIP1-212ENST00000487507 KDM6BO15054 1643 aa23.32■■□□□ 1.32
SGIP1-212ENST00000487507 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
SGIP1-212ENST00000487507 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
SGIP1-212ENST00000487507 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
SGIP1-212ENST00000487507 FAM69CQ0P6D2 419 aa23.29■■□□□ 1.32
SGIP1-212ENST00000487507 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SGIP1-212ENST00000487507 DIP2BQ9P265 1576 aa23.22■■□□□ 1.31
SGIP1-212ENST00000487507 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
SGIP1-212ENST00000487507 NUP160Q12769 1436 aa23.19■■□□□ 1.3
SGIP1-212ENST00000487507 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
SGIP1-212ENST00000487507 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms