RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 NISCHQ9Y2I1 1504 aa41.84■■■■■ 4.29
TFE3-203ENST00000487451 ABCC9O60706 1549 aa37.63■■■■□ 3.61
TFE3-203ENST00000487451 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
TFE3-203ENST00000487451 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
TFE3-203ENST00000487451 NACADO15069 1562 aa35.48■■■■□ 3.27
TFE3-203ENST00000487451 DNAJC5BQ9UF47 199 aa35.35■■■■□ 3.25
TFE3-203ENST00000487451 DCAF8L2P0C7V8 631 aa35.24■■■■□ 3.23
TFE3-203ENST00000487451 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
TFE3-203ENST00000487451 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
TFE3-203ENST00000487451 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
TFE3-203ENST00000487451 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
TFE3-203ENST00000487451 ZCCHC6Q5VYS8 1495 aaKnown RBP34.69■■■■□ 3.14
TFE3-203ENST00000487451 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
TFE3-203ENST00000487451 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
TFE3-203ENST00000487451 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
TFE3-203ENST00000487451 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
TFE3-203ENST00000487451 EIF4G1Q04637 1599 aaKnown RBP33.92■■■■□ 3.02
TFE3-203ENST00000487451 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
TFE3-203ENST00000487451 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
TFE3-203ENST00000487451 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
TFE3-203ENST00000487451 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
TFE3-203ENST00000487451 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
TFE3-203ENST00000487451 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
TFE3-203ENST00000487451 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.79
TFE3-203ENST00000487451 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
TFE3-203ENST00000487451 CUX2O14529 1486 aa32.38■■■□□ 2.77
TFE3-203ENST00000487451 DNAJC5Q9H3Z4 198 aa32.37■■■□□ 2.77
TFE3-203ENST00000487451 NESP48681 1621 aa32.36■■■□□ 2.77
TFE3-203ENST00000487451 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
TFE3-203ENST00000487451 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
TFE3-203ENST00000487451 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
TFE3-203ENST00000487451 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
TFE3-203ENST00000487451 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
TFE3-203ENST00000487451 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
TFE3-203ENST00000487451 WIZO95785 1651 aa31.94■■■□□ 2.7
TFE3-203ENST00000487451 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
TFE3-203ENST00000487451 CADPSQ9ULU8 1353 aa31.73■■■□□ 2.67
TFE3-203ENST00000487451 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
TFE3-203ENST00000487451 WDR62O43379 1518 aa31.55■■■□□ 2.64
TFE3-203ENST00000487451 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
TFE3-203ENST00000487451 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
TFE3-203ENST00000487451 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
TFE3-203ENST00000487451 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
TFE3-203ENST00000487451 CFTRP13569 1480 aa31.4■■■□□ 2.62
TFE3-203ENST00000487451 URB2Q14146 1524 aaKnown RBP31.22■■■□□ 2.59
TFE3-203ENST00000487451 PRDM2Q13029 1718 aa31.2■■■□□ 2.58
TFE3-203ENST00000487451 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
TFE3-203ENST00000487451 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
TFE3-203ENST00000487451 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
TFE3-203ENST00000487451 ZNF608Q9ULD9 1512 aaPredicted RBP30.85■■■□□ 2.53
TFE3-203ENST00000487451 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
TFE3-203ENST00000487451 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
TFE3-203ENST00000487451 DNMBPQ6XZF7 1577 aa30.73■■■□□ 2.51
TFE3-203ENST00000487451 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.5
TFE3-203ENST00000487451 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
TFE3-203ENST00000487451 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
TFE3-203ENST00000487451 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
TFE3-203ENST00000487451 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
TFE3-203ENST00000487451 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
TFE3-203ENST00000487451 AQRO60306 1485 aaKnown RBP eCLIP30.53■■■□□ 2.488e-7■■■■□ 22.4
TFE3-203ENST00000487451 POLA1P09884 1462 aaPredicted RBP30.53■■■□□ 2.48
TFE3-203ENST00000487451 CHD1O14646 1710 aa30.51■■■□□ 2.47
TFE3-203ENST00000487451 ARHGEF11O15085 1522 aa30.46■■■□□ 2.47
TFE3-203ENST00000487451 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
TFE3-203ENST00000487451 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
TFE3-203ENST00000487451 CUX1P39880 1505 aa30.33■■■□□ 2.45
TFE3-203ENST00000487451 SOGA1O94964 1423 aa30.32■■■□□ 2.44
TFE3-203ENST00000487451 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
TFE3-203ENST00000487451 FBLN2P98095 1184 aa30.25■■■□□ 2.43
TFE3-203ENST00000487451 SNAPC4Q5SXM2 1469 aa30.23■■■□□ 2.43
TFE3-203ENST00000487451 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
TFE3-203ENST00000487451 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
TFE3-203ENST00000487451 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
TFE3-203ENST00000487451 CLASP1Q7Z460 1538 aa30.11■■■□□ 2.41
TFE3-203ENST00000487451 PBRM1Q86U86 1689 aa30.09■■■□□ 2.41
TFE3-203ENST00000487451 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
TFE3-203ENST00000487451 GRIN2BQ13224 1484 aa30.07■■■□□ 2.4
TFE3-203ENST00000487451 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
TFE3-203ENST00000487451 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
TFE3-203ENST00000487451 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
TFE3-203ENST00000487451 SYNJ2O15056 1496 aa29.99■■■□□ 2.39
TFE3-203ENST00000487451 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
TFE3-203ENST00000487451 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
TFE3-203ENST00000487451 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
TFE3-203ENST00000487451 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
TFE3-203ENST00000487451 TOP2BQ02880 1626 aa29.82■■■□□ 2.36
TFE3-203ENST00000487451 TRHP20396 242 aaPredicted RBP29.8■■■□□ 2.36
TFE3-203ENST00000487451 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
TFE3-203ENST00000487451 ADAMTS12P58397 1594 aa29.77■■■□□ 2.36
TFE3-203ENST00000487451 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
TFE3-203ENST00000487451 CEP170Q5SW79 1584 aa29.7■■■□□ 2.35
TFE3-203ENST00000487451 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
TFE3-203ENST00000487451 NUP160Q12769 1436 aa29.62■■■□□ 2.33
TFE3-203ENST00000487451 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
TFE3-203ENST00000487451 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
TFE3-203ENST00000487451 SHROOM2Q13796 1616 aa29.56■■■□□ 2.32
TFE3-203ENST00000487451 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
TFE3-203ENST00000487451 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
TFE3-203ENST00000487451 JPH4Q96JJ6 628 aa29.24■■■□□ 2.27
TFE3-203ENST00000487451 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms