RNA–Protein interactions for RNA: ENST00000487394.1

BCL3-209, Transcript of B cell CLL/lymphoma 3, humanhuman

TSL 3

Gene BCL3, Length 603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3-209ENST00000487394 NISCHQ9Y2I1 1504 aa47.4■■■■■ 5.18
BCL3-209ENST00000487394 CCDC180Q9P1Z9 1646 aa42.47■■■■■ 4.39
BCL3-209ENST00000487394 ABCC9O60706 1549 aa42.2■■■■■ 4.35
BCL3-209ENST00000487394 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
BCL3-209ENST00000487394 NACADO15069 1562 aa40.1■■■■■ 4.01
BCL3-209ENST00000487394 DCAF8L2P0C7V8 631 aa39.91■■■■□ 3.98
BCL3-209ENST00000487394 MYO15BQ96JP2 1530 aa39.64■■■■□ 3.94
BCL3-209ENST00000487394 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
BCL3-209ENST00000487394 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
BCL3-209ENST00000487394 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
BCL3-209ENST00000487394 DNAJC5BQ9UF47 199 aa39.3■■■■□ 3.88
BCL3-209ENST00000487394 DCAF1Q9Y4B6 1507 aa39.2■■■■□ 3.87
BCL3-209ENST00000487394 BICRAQ9NZM4 1560 aa39.07■■■■□ 3.84
BCL3-209ENST00000487394 SCRIBQ14160 1630 aa38.69■■■■□ 3.78
BCL3-209ENST00000487394 SHROOM4Q9ULL8 1493 aa38.66■■■■□ 3.78
BCL3-209ENST00000487394 CC2D2AQ9P2K1 1620 aa38.13■■■■□ 3.69
BCL3-209ENST00000487394 EIF4G1Q04637 1599 aaKnown RBP38.13■■■■□ 3.69
BCL3-209ENST00000487394 CECR2Q9BXF3 1484 aa38.01■■■■□ 3.67
BCL3-209ENST00000487394 NCAPD3P42695 1498 aa37■■■■□ 3.51
BCL3-209ENST00000487394 SMARCA4P51532 1647 aa36.94■■■■□ 3.5
BCL3-209ENST00000487394 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
BCL3-209ENST00000487394 SMARCA2P51531 1590 aa36.86■■■■□ 3.49
BCL3-209ENST00000487394 BAZ1AQ9NRL2 1556 aaPredicted RBP36.82■■■■□ 3.48
BCL3-209ENST00000487394 HMGXB3Q12766 1538 aa36.76■■■■□ 3.48
BCL3-209ENST00000487394 BAZ1BQ9UIG0 1483 aaKnown RBP36.6■■■■□ 3.45
BCL3-209ENST00000487394 PEG3Q9GZU2 1588 aa36.59■■■■□ 3.45
BCL3-209ENST00000487394 MROH2BQ7Z745 1585 aa36.5■■■■□ 3.43
BCL3-209ENST00000487394 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
BCL3-209ENST00000487394 CUX2O14529 1486 aa36.31■■■■□ 3.4
BCL3-209ENST00000487394 NESP48681 1621 aa36.29■■■■□ 3.4
BCL3-209ENST00000487394 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
BCL3-209ENST00000487394 WIZO95785 1651 aa36.08■■■■□ 3.37
BCL3-209ENST00000487394 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
BCL3-209ENST00000487394 PDS5BQ9NTI5 1447 aa35.94■■■■□ 3.34
BCL3-209ENST00000487394 THOC2Q8NI27 1593 aaKnown RBP35.9■■■■□ 3.34
BCL3-209ENST00000487394 CADPSQ9ULU8 1353 aa35.89■■■■□ 3.34
BCL3-209ENST00000487394 KIF21AQ7Z4S6 1674 aa35.85■■■■□ 3.33
BCL3-209ENST00000487394 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
BCL3-209ENST00000487394 TOP2AP11388 1531 aaKnown RBP35.68■■■■□ 3.3
BCL3-209ENST00000487394 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
BCL3-209ENST00000487394 CFTRP13569 1480 aa35.53■■■■□ 3.28
BCL3-209ENST00000487394 CEP164Q9UPV0 1460 aa35.51■■■■□ 3.28
BCL3-209ENST00000487394 WDR62O43379 1518 aa35.5■■■■□ 3.27
BCL3-209ENST00000487394 FANCD2Q9BXW9 1451 aa35.48■■■■□ 3.27
BCL3-209ENST00000487394 CCDC88BA6NC98 1476 aa35.25■■■■□ 3.23
BCL3-209ENST00000487394 PRDM2Q13029 1718 aa35.2■■■■□ 3.23
BCL3-209ENST00000487394 URB2Q14146 1524 aaKnown RBP35.15■■■■□ 3.22
BCL3-209ENST00000487394 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
BCL3-209ENST00000487394 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
BCL3-209ENST00000487394 IFT140Q96RY7 1462 aa34.79■■■■□ 3.16
BCL3-209ENST00000487394 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
BCL3-209ENST00000487394 OSCARQ8IYS5 282 aa34.69■■■■□ 3.14
BCL3-209ENST00000487394 ZNF608Q9ULD9 1512 aaPredicted RBP34.66■■■■□ 3.14
BCL3-209ENST00000487394 EIF4G3O43432 1585 aaKnown RBP34.52■■■■□ 3.12
BCL3-209ENST00000487394 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
BCL3-209ENST00000487394 TARBP1Q13395 1621 aaKnown RBP34.48■■■■□ 3.11
BCL3-209ENST00000487394 POLA1P09884 1462 aaPredicted RBP34.48■■■■□ 3.11
BCL3-209ENST00000487394 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
BCL3-209ENST00000487394 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
BCL3-209ENST00000487394 SOGA1O94964 1423 aa34.34■■■■□ 3.09
BCL3-209ENST00000487394 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
BCL3-209ENST00000487394 FGD5Q6ZNL6 1462 aa34.31■■■■□ 3.08
BCL3-209ENST00000487394 CUX1P39880 1505 aa34.3■■■■□ 3.08
BCL3-209ENST00000487394 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
BCL3-209ENST00000487394 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
BCL3-209ENST00000487394 CHD1O14646 1710 aa34.2■■■■□ 3.07
BCL3-209ENST00000487394 RIMBP3CA6NJZ7 1639 aa34.18■■■■□ 3.06
BCL3-209ENST00000487394 RIMBP3BA6NNM3 1639 aa34.18■■■■□ 3.06
BCL3-209ENST00000487394 RIMBP3Q9UFD9 1639 aa34.18■■■■□ 3.06
BCL3-209ENST00000487394 FBLN2P98095 1184 aa34.15■■■■□ 3.06
BCL3-209ENST00000487394 ARHGEF11O15085 1522 aa34.11■■■■□ 3.05
BCL3-209ENST00000487394 SNAPC4Q5SXM2 1469 aa34.07■■■■□ 3.04
BCL3-209ENST00000487394 GRIN2BQ13224 1484 aa34.03■■■■□ 3.04
BCL3-209ENST00000487394 MAGI1Q96QZ7 1491 aaPredicted RBP34.02■■■■□ 3.04
BCL3-209ENST00000487394 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
BCL3-209ENST00000487394 ABCA10Q8WWZ4 1543 aa33.94■■■■□ 3.02
BCL3-209ENST00000487394 GAPVD1Q14C86 1478 aa33.94■■■■□ 3.02
BCL3-209ENST00000487394 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
BCL3-209ENST00000487394 SYNJ2O15056 1496 aa33.89■■■■□ 3.02
BCL3-209ENST00000487394 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
BCL3-209ENST00000487394 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
BCL3-209ENST00000487394 SYNJ1O43426 1573 aa33.86■■■■□ 3.01
BCL3-209ENST00000487394 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
BCL3-209ENST00000487394 CYB5RLQ6IPT4 315 aa33.84■■■■□ 3.01
BCL3-209ENST00000487394 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
BCL3-209ENST00000487394 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
BCL3-209ENST00000487394 ARAP1Q96P48 1450 aa33.77■■■■□ 3
BCL3-209ENST00000487394 ADAMTS12P58397 1594 aa33.6■■■□□ 2.97
BCL3-209ENST00000487394 GRIN2AQ12879 1464 aa33.58■■■□□ 2.97
BCL3-209ENST00000487394 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
BCL3-209ENST00000487394 FHAD1B1AJZ9 1412 aa33.53■■■□□ 2.96
BCL3-209ENST00000487394 NUP160Q12769 1436 aa33.45■■■□□ 2.95
BCL3-209ENST00000487394 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
BCL3-209ENST00000487394 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
BCL3-209ENST00000487394 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
BCL3-209ENST00000487394 ERCC6L2Q5T890 1561 aa33.27■■■□□ 2.92
BCL3-209ENST00000487394 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
BCL3-209ENST00000487394 PRG4Q92954 1404 aaPredicted RBP33.12■■■□□ 2.89
BCL3-209ENST00000487394 IGF1RP08069 1367 aa33.12■■■□□ 2.89
BCL3-209ENST00000487394 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms