RNA–Protein interactions for RNA: ENST00000487346.1

LPIN1-217, Transcript of lipin 1, humanhuman

TSL 2

Gene LPIN1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-217ENST00000487346 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
LPIN1-217ENST00000487346 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
LPIN1-217ENST00000487346 ABCC9O60706 1549 aa30.51■■■□□ 2.47
LPIN1-217ENST00000487346 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
LPIN1-217ENST00000487346 NACADO15069 1562 aa29.24■■■□□ 2.27
LPIN1-217ENST00000487346 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
LPIN1-217ENST00000487346 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
LPIN1-217ENST00000487346 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
LPIN1-217ENST00000487346 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
LPIN1-217ENST00000487346 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
LPIN1-217ENST00000487346 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
LPIN1-217ENST00000487346 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
LPIN1-217ENST00000487346 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
LPIN1-217ENST00000487346 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
LPIN1-217ENST00000487346 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
LPIN1-217ENST00000487346 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
LPIN1-217ENST00000487346 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
LPIN1-217ENST00000487346 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
LPIN1-217ENST00000487346 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
LPIN1-217ENST00000487346 NCAPD3P42695 1498 aa27■■□□□ 1.91
LPIN1-217ENST00000487346 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
LPIN1-217ENST00000487346 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
LPIN1-217ENST00000487346 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
LPIN1-217ENST00000487346 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
LPIN1-217ENST00000487346 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
LPIN1-217ENST00000487346 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
LPIN1-217ENST00000487346 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
LPIN1-217ENST00000487346 WIZO95785 1651 aa26.47■■□□□ 1.83
LPIN1-217ENST00000487346 RSF1Q96T23 1441 aaPredicted RBP26.41■■□□□ 1.82
LPIN1-217ENST00000487346 NESP48681 1621 aa26.35■■□□□ 1.81
LPIN1-217ENST00000487346 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
LPIN1-217ENST00000487346 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
LPIN1-217ENST00000487346 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
LPIN1-217ENST00000487346 CUX2O14529 1486 aa26.17■■□□□ 1.78
LPIN1-217ENST00000487346 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
LPIN1-217ENST00000487346 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
LPIN1-217ENST00000487346 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
LPIN1-217ENST00000487346 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
LPIN1-217ENST00000487346 CFTRP13569 1480 aa25.98■■□□□ 1.75
LPIN1-217ENST00000487346 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
LPIN1-217ENST00000487346 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
LPIN1-217ENST00000487346 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
LPIN1-217ENST00000487346 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
LPIN1-217ENST00000487346 WDR62O43379 1518 aa25.78■■□□□ 1.72
LPIN1-217ENST00000487346 PRDM2Q13029 1718 aa25.76■■□□□ 1.71
LPIN1-217ENST00000487346 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
LPIN1-217ENST00000487346 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
LPIN1-217ENST00000487346 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
LPIN1-217ENST00000487346 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
LPIN1-217ENST00000487346 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
LPIN1-217ENST00000487346 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
LPIN1-217ENST00000487346 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
LPIN1-217ENST00000487346 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
LPIN1-217ENST00000487346 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
LPIN1-217ENST00000487346 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
LPIN1-217ENST00000487346 CUX1P39880 1505 aa25.15■■□□□ 1.62
LPIN1-217ENST00000487346 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
LPIN1-217ENST00000487346 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
LPIN1-217ENST00000487346 SOGA1O94964 1423 aa25.07■■□□□ 1.6
LPIN1-217ENST00000487346 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
LPIN1-217ENST00000487346 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.68e-9■■■■■ 50.3
LPIN1-217ENST00000487346 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
LPIN1-217ENST00000487346 WDR97A6NE52 1622 aa25■■□□□ 1.59
LPIN1-217ENST00000487346 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
LPIN1-217ENST00000487346 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
LPIN1-217ENST00000487346 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
LPIN1-217ENST00000487346 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
LPIN1-217ENST00000487346 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
LPIN1-217ENST00000487346 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
LPIN1-217ENST00000487346 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
LPIN1-217ENST00000487346 CHD1O14646 1710 aa24.81■■□□□ 1.56
LPIN1-217ENST00000487346 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
LPIN1-217ENST00000487346 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
LPIN1-217ENST00000487346 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
LPIN1-217ENST00000487346 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
LPIN1-217ENST00000487346 PBRM1Q86U86 1689 aa24.73■■□□□ 1.55
LPIN1-217ENST00000487346 FBLN2P98095 1184 aa24.71■■□□□ 1.55
LPIN1-217ENST00000487346 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
LPIN1-217ENST00000487346 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
LPIN1-217ENST00000487346 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
LPIN1-217ENST00000487346 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
LPIN1-217ENST00000487346 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
LPIN1-217ENST00000487346 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
LPIN1-217ENST00000487346 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
LPIN1-217ENST00000487346 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.53
LPIN1-217ENST00000487346 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
LPIN1-217ENST00000487346 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
LPIN1-217ENST00000487346 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
LPIN1-217ENST00000487346 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
LPIN1-217ENST00000487346 NUP160Q12769 1436 aa24.42■■□□□ 1.5
LPIN1-217ENST00000487346 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
LPIN1-217ENST00000487346 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
LPIN1-217ENST00000487346 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
LPIN1-217ENST00000487346 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
LPIN1-217ENST00000487346 IGF1RP08069 1367 aa24.35■■□□□ 1.49
LPIN1-217ENST00000487346 CUL7Q14999 1698 aa24.27■■□□□ 1.48
LPIN1-217ENST00000487346 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
LPIN1-217ENST00000487346 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
LPIN1-217ENST00000487346 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
LPIN1-217ENST00000487346 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms