RNA–Protein interactions for RNA: ENST00000487180.5

DYSF-217, Transcript of dysferlin, humanhuman

TSL 4

Gene DYSF, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-217ENST00000487180 NISCHQ9Y2I1 1504 aa32.49■■■□□ 2.79
DYSF-217ENST00000487180 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
DYSF-217ENST00000487180 ABCC9O60706 1549 aa29.02■■■□□ 2.24
DYSF-217ENST00000487180 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
DYSF-217ENST00000487180 NACADO15069 1562 aa27.53■■■□□ 2
DYSF-217ENST00000487180 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
DYSF-217ENST00000487180 DCAF8L2P0C7V8 631 aa27.31■■□□□ 1.96
DYSF-217ENST00000487180 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
DYSF-217ENST00000487180 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
DYSF-217ENST00000487180 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
DYSF-217ENST00000487180 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
DYSF-217ENST00000487180 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
DYSF-217ENST00000487180 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
DYSF-217ENST00000487180 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
DYSF-217ENST00000487180 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
DYSF-217ENST00000487180 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
DYSF-217ENST00000487180 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
DYSF-217ENST00000487180 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
DYSF-217ENST00000487180 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
DYSF-217ENST00000487180 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
DYSF-217ENST00000487180 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
DYSF-217ENST00000487180 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
DYSF-217ENST00000487180 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
DYSF-217ENST00000487180 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
DYSF-217ENST00000487180 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
DYSF-217ENST00000487180 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
DYSF-217ENST00000487180 CUX2O14529 1486 aa25.05■■□□□ 1.6
DYSF-217ENST00000487180 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
DYSF-217ENST00000487180 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
DYSF-217ENST00000487180 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
DYSF-217ENST00000487180 NESP48681 1621 aa24.97■■□□□ 1.59
DYSF-217ENST00000487180 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
DYSF-217ENST00000487180 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
DYSF-217ENST00000487180 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
DYSF-217ENST00000487180 WIZO95785 1651 aa24.68■■□□□ 1.54
DYSF-217ENST00000487180 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
DYSF-217ENST00000487180 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
DYSF-217ENST00000487180 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
DYSF-217ENST00000487180 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
DYSF-217ENST00000487180 CFTRP13569 1480 aa24.4■■□□□ 1.5
DYSF-217ENST00000487180 WDR62O43379 1518 aa24.4■■□□□ 1.5
DYSF-217ENST00000487180 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
DYSF-217ENST00000487180 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
DYSF-217ENST00000487180 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
DYSF-217ENST00000487180 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
DYSF-217ENST00000487180 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
DYSF-217ENST00000487180 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
DYSF-217ENST00000487180 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
DYSF-217ENST00000487180 TOPBP1Q92547 1522 aa23.89■■□□□ 1.41
DYSF-217ENST00000487180 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
DYSF-217ENST00000487180 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
DYSF-217ENST00000487180 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
DYSF-217ENST00000487180 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
DYSF-217ENST00000487180 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
DYSF-217ENST00000487180 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
DYSF-217ENST00000487180 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
DYSF-217ENST00000487180 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
DYSF-217ENST00000487180 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.37
DYSF-217ENST00000487180 SOGA1O94964 1423 aa23.56■■□□□ 1.36
DYSF-217ENST00000487180 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
DYSF-217ENST00000487180 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
DYSF-217ENST00000487180 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
DYSF-217ENST00000487180 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
DYSF-217ENST00000487180 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
DYSF-217ENST00000487180 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
DYSF-217ENST00000487180 CUX1P39880 1505 aa23.49■■□□□ 1.35
DYSF-217ENST00000487180 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
DYSF-217ENST00000487180 CHD1O14646 1710 aa23.45■■□□□ 1.34
DYSF-217ENST00000487180 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
DYSF-217ENST00000487180 FBLN2P98095 1184 aa23.4■■□□□ 1.34
DYSF-217ENST00000487180 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
DYSF-217ENST00000487180 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
DYSF-217ENST00000487180 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
DYSF-217ENST00000487180 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
DYSF-217ENST00000487180 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
DYSF-217ENST00000487180 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
DYSF-217ENST00000487180 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
DYSF-217ENST00000487180 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
DYSF-217ENST00000487180 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
DYSF-217ENST00000487180 SYNJ2O15056 1496 aa23.25■■□□□ 1.31
DYSF-217ENST00000487180 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
DYSF-217ENST00000487180 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
DYSF-217ENST00000487180 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
DYSF-217ENST00000487180 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
DYSF-217ENST00000487180 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
DYSF-217ENST00000487180 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
DYSF-217ENST00000487180 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
DYSF-217ENST00000487180 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
DYSF-217ENST00000487180 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
DYSF-217ENST00000487180 NUP160Q12769 1436 aa22.99■■□□□ 1.27
DYSF-217ENST00000487180 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
DYSF-217ENST00000487180 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
DYSF-217ENST00000487180 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
DYSF-217ENST00000487180 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
DYSF-217ENST00000487180 ERCC6L2Q5T890 1561 aa22.88■■□□□ 1.25
DYSF-217ENST00000487180 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
DYSF-217ENST00000487180 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
DYSF-217ENST00000487180 IGF1RP08069 1367 aa22.75■■□□□ 1.23
DYSF-217ENST00000487180 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
DYSF-217ENST00000487180 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms