RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-223ENST00000487168 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
KRIT1-223ENST00000487168 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
KRIT1-223ENST00000487168 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
KRIT1-223ENST00000487168 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
KRIT1-223ENST00000487168 PHF23Q9BUL5 403 aaPredicted RBP21.79■■□□□ 1.08
KRIT1-223ENST00000487168 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
KRIT1-223ENST00000487168 ABCC9O60706 1549 aa21.12■□□□□ 0.97
KRIT1-223ENST00000487168 FOXD1Q16676 465 aa20.61■□□□□ 0.89
KRIT1-223ENST00000487168 NACADO15069 1562 aa20.48■□□□□ 0.87
KRIT1-223ENST00000487168 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
KRIT1-223ENST00000487168 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
KRIT1-223ENST00000487168 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
KRIT1-223ENST00000487168 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
KRIT1-223ENST00000487168 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
KRIT1-223ENST00000487168 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
KRIT1-223ENST00000487168 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
KRIT1-223ENST00000487168 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
KRIT1-223ENST00000487168 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
KRIT1-223ENST00000487168 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
KRIT1-223ENST00000487168 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
KRIT1-223ENST00000487168 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
KRIT1-223ENST00000487168 MSH5O43196 834 aa19.37■□□□□ 0.69
KRIT1-223ENST00000487168 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
KRIT1-223ENST00000487168 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
KRIT1-223ENST00000487168 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
KRIT1-223ENST00000487168 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
KRIT1-223ENST00000487168 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
KRIT1-223ENST00000487168 ADRA2BP18089 450 aa19.11■□□□□ 0.65
KRIT1-223ENST00000487168 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
KRIT1-223ENST00000487168 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
KRIT1-223ENST00000487168 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
KRIT1-223ENST00000487168 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
KRIT1-223ENST00000487168 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
KRIT1-223ENST00000487168 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
KRIT1-223ENST00000487168 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
KRIT1-223ENST00000487168 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
KRIT1-223ENST00000487168 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
KRIT1-223ENST00000487168 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
KRIT1-223ENST00000487168 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
KRIT1-223ENST00000487168 WIZO95785 1651 aa18.41■□□□□ 0.54
KRIT1-223ENST00000487168 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
KRIT1-223ENST00000487168 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
KRIT1-223ENST00000487168 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
KRIT1-223ENST00000487168 CUX2O14529 1486 aa18.27■□□□□ 0.52
KRIT1-223ENST00000487168 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.51
KRIT1-223ENST00000487168 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
KRIT1-223ENST00000487168 NESP48681 1621 aa18.24■□□□□ 0.51
KRIT1-223ENST00000487168 CFTRP13569 1480 aa18.17■□□□□ 0.5
KRIT1-223ENST00000487168 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
KRIT1-223ENST00000487168 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
KRIT1-223ENST00000487168 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
KRIT1-223ENST00000487168 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
KRIT1-223ENST00000487168 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
KRIT1-223ENST00000487168 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
KRIT1-223ENST00000487168 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
KRIT1-223ENST00000487168 WDR62O43379 1518 aa18.02■□□□□ 0.47
KRIT1-223ENST00000487168 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
KRIT1-223ENST00000487168 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
KRIT1-223ENST00000487168 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
KRIT1-223ENST00000487168 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
KRIT1-223ENST00000487168 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
KRIT1-223ENST00000487168 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
KRIT1-223ENST00000487168 SUPT5HO00267 1087 aaKnown RBP17.69■□□□□ 0.42
KRIT1-223ENST00000487168 KCNA4P22459 653 aa17.67■□□□□ 0.42
KRIT1-223ENST00000487168 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
KRIT1-223ENST00000487168 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
KRIT1-223ENST00000487168 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
KRIT1-223ENST00000487168 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
KRIT1-223ENST00000487168 CUX1P39880 1505 aa17.53■□□□□ 0.4
KRIT1-223ENST00000487168 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
KRIT1-223ENST00000487168 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
KRIT1-223ENST00000487168 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
KRIT1-223ENST00000487168 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
KRIT1-223ENST00000487168 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
KRIT1-223ENST00000487168 SOGA1O94964 1423 aa17.47■□□□□ 0.39
KRIT1-223ENST00000487168 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
KRIT1-223ENST00000487168 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
KRIT1-223ENST00000487168 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
KRIT1-223ENST00000487168 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
KRIT1-223ENST00000487168 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
KRIT1-223ENST00000487168 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
KRIT1-223ENST00000487168 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
KRIT1-223ENST00000487168 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
KRIT1-223ENST00000487168 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
KRIT1-223ENST00000487168 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
KRIT1-223ENST00000487168 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
KRIT1-223ENST00000487168 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
KRIT1-223ENST00000487168 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
KRIT1-223ENST00000487168 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
KRIT1-223ENST00000487168 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
KRIT1-223ENST00000487168 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
KRIT1-223ENST00000487168 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
KRIT1-223ENST00000487168 CHD1O14646 1710 aa17.24■□□□□ 0.35
KRIT1-223ENST00000487168 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
KRIT1-223ENST00000487168 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
KRIT1-223ENST00000487168 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
KRIT1-223ENST00000487168 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
KRIT1-223ENST00000487168 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
KRIT1-223ENST00000487168 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
KRIT1-223ENST00000487168 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms