RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
ECHDC2-213ENST00000487040 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
ECHDC2-213ENST00000487040 ABCC9O60706 1549 aa26.68■■□□□ 1.86
ECHDC2-213ENST00000487040 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
ECHDC2-213ENST00000487040 NACADO15069 1562 aa25.71■■□□□ 1.71
ECHDC2-213ENST00000487040 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
ECHDC2-213ENST00000487040 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
ECHDC2-213ENST00000487040 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
ECHDC2-213ENST00000487040 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
ECHDC2-213ENST00000487040 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.61
ECHDC2-213ENST00000487040 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
ECHDC2-213ENST00000487040 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
ECHDC2-213ENST00000487040 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
ECHDC2-213ENST00000487040 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
ECHDC2-213ENST00000487040 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
ECHDC2-213ENST00000487040 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
ECHDC2-213ENST00000487040 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
ECHDC2-213ENST00000487040 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
ECHDC2-213ENST00000487040 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
ECHDC2-213ENST00000487040 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
ECHDC2-213ENST00000487040 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
ECHDC2-213ENST00000487040 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
ECHDC2-213ENST00000487040 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
ECHDC2-213ENST00000487040 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
ECHDC2-213ENST00000487040 PEG3Q9GZU2 1588 aa23.63■■□□□ 1.37
ECHDC2-213ENST00000487040 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
ECHDC2-213ENST00000487040 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
ECHDC2-213ENST00000487040 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
ECHDC2-213ENST00000487040 WIZO95785 1651 aa23.37■■□□□ 1.33
ECHDC2-213ENST00000487040 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
ECHDC2-213ENST00000487040 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
ECHDC2-213ENST00000487040 NESP48681 1621 aa23.07■■□□□ 1.28
ECHDC2-213ENST00000487040 ERCC6Q03468 1493 aa23.04■■□□□ 1.28
ECHDC2-213ENST00000487040 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
ECHDC2-213ENST00000487040 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
ECHDC2-213ENST00000487040 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
ECHDC2-213ENST00000487040 CFTRP13569 1480 aa22.87■■□□□ 1.25
ECHDC2-213ENST00000487040 CUX2O14529 1486 aa22.83■■□□□ 1.25
ECHDC2-213ENST00000487040 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
ECHDC2-213ENST00000487040 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
ECHDC2-213ENST00000487040 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
ECHDC2-213ENST00000487040 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
ECHDC2-213ENST00000487040 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
ECHDC2-213ENST00000487040 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
ECHDC2-213ENST00000487040 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
ECHDC2-213ENST00000487040 WDR62O43379 1518 aa22.62■■□□□ 1.21
ECHDC2-213ENST00000487040 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
ECHDC2-213ENST00000487040 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
ECHDC2-213ENST00000487040 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
ECHDC2-213ENST00000487040 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
ECHDC2-213ENST00000487040 IFT140Q96RY7 1462 aa22.26■■□□□ 1.15
ECHDC2-213ENST00000487040 CUX1P39880 1505 aa22.18■■□□□ 1.14
ECHDC2-213ENST00000487040 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
ECHDC2-213ENST00000487040 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
ECHDC2-213ENST00000487040 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
ECHDC2-213ENST00000487040 ZNF608Q9ULD9 1512 aaPredicted RBP22.1■■□□□ 1.13
ECHDC2-213ENST00000487040 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
ECHDC2-213ENST00000487040 SOGA1O94964 1423 aa22.08■■□□□ 1.13
ECHDC2-213ENST00000487040 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
ECHDC2-213ENST00000487040 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
ECHDC2-213ENST00000487040 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
ECHDC2-213ENST00000487040 WDR97A6NE52 1622 aa22.02■■□□□ 1.12
ECHDC2-213ENST00000487040 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
ECHDC2-213ENST00000487040 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
ECHDC2-213ENST00000487040 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
ECHDC2-213ENST00000487040 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.113e-6■■□□□ 13.8
ECHDC2-213ENST00000487040 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
ECHDC2-213ENST00000487040 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
ECHDC2-213ENST00000487040 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
ECHDC2-213ENST00000487040 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
ECHDC2-213ENST00000487040 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
ECHDC2-213ENST00000487040 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
ECHDC2-213ENST00000487040 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
ECHDC2-213ENST00000487040 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
ECHDC2-213ENST00000487040 PBRM1Q86U86 1689 aa21.78■■□□□ 1.08
ECHDC2-213ENST00000487040 CHD1O14646 1710 aa21.74■■□□□ 1.07
ECHDC2-213ENST00000487040 FBLN2P98095 1184 aa21.71■■□□□ 1.07
ECHDC2-213ENST00000487040 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
ECHDC2-213ENST00000487040 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
ECHDC2-213ENST00000487040 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
ECHDC2-213ENST00000487040 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
ECHDC2-213ENST00000487040 ADAMTS12P58397 1594 aa21.62■■□□□ 1.05
ECHDC2-213ENST00000487040 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
ECHDC2-213ENST00000487040 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
ECHDC2-213ENST00000487040 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
ECHDC2-213ENST00000487040 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
ECHDC2-213ENST00000487040 IGF1RP08069 1367 aa21.49■■□□□ 1.03
ECHDC2-213ENST00000487040 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
ECHDC2-213ENST00000487040 CUL7Q14999 1698 aa21.48■■□□□ 1.03
ECHDC2-213ENST00000487040 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
ECHDC2-213ENST00000487040 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
ECHDC2-213ENST00000487040 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
ECHDC2-213ENST00000487040 NUP160Q12769 1436 aa21.47■■□□□ 1.03
ECHDC2-213ENST00000487040 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
ECHDC2-213ENST00000487040 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
ECHDC2-213ENST00000487040 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
ECHDC2-213ENST00000487040 SHROOM2Q13796 1616 aa21.31■■□□□ 1
ECHDC2-213ENST00000487040 ARAP1Q96P48 1450 aa21.3■■□□□ 1
ECHDC2-213ENST00000487040 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
ECHDC2-213ENST00000487040 KIAA0586Q9BVV6 1533 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms