RNA–Protein interactions for RNA: ENST00000487019.1

MEN1-216, Transcript of menin 1, humanhuman

TSL 3

Gene MEN1, Length 314 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-216ENST00000487019 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.58
MEN1-216ENST00000487019 CCDC180Q9P1Z9 1646 aa39.13■■■■□ 3.85
MEN1-216ENST00000487019 ABCC9O60706 1549 aa38.37■■■■□ 3.73
MEN1-216ENST00000487019 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
MEN1-216ENST00000487019 NACADO15069 1562 aa36.79■■■■□ 3.48
MEN1-216ENST00000487019 MYO15BQ96JP2 1530 aa36.49■■■■□ 3.43
MEN1-216ENST00000487019 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
MEN1-216ENST00000487019 ZCCHC6Q5VYS8 1495 aaKnown RBP36.31■■■■□ 3.4
MEN1-216ENST00000487019 DCAF1Q9Y4B6 1507 aa36.18■■■■□ 3.38
MEN1-216ENST00000487019 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
MEN1-216ENST00000487019 BICRAQ9NZM4 1560 aa35.73■■■■□ 3.31
MEN1-216ENST00000487019 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
MEN1-216ENST00000487019 SCRIBQ14160 1630 aa35.52■■■■□ 3.28
MEN1-216ENST00000487019 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
MEN1-216ENST00000487019 DNAJC5BQ9UF47 199 aa35.37■■■■□ 3.25
MEN1-216ENST00000487019 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
MEN1-216ENST00000487019 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
MEN1-216ENST00000487019 CECR2Q9BXF3 1484 aa34.57■■■■□ 3.12
MEN1-216ENST00000487019 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
MEN1-216ENST00000487019 BAZ1AQ9NRL2 1556 aaPredicted RBP33.91■■■■□ 3.02
MEN1-216ENST00000487019 NCAPD3P42695 1498 aa33.87■■■■□ 3.01
MEN1-216ENST00000487019 SMARCA2P51531 1590 aa33.86■■■■□ 3.01
MEN1-216ENST00000487019 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3
MEN1-216ENST00000487019 HMGXB3Q12766 1538 aa33.77■■■■□ 3
MEN1-216ENST00000487019 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
MEN1-216ENST00000487019 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
MEN1-216ENST00000487019 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
MEN1-216ENST00000487019 WIZO95785 1651 aa33.23■■■□□ 2.91
MEN1-216ENST00000487019 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
MEN1-216ENST00000487019 LAMC3Q9Y6N6 1575 aa33.13■■■□□ 2.89
MEN1-216ENST00000487019 NESP48681 1621 aa33.08■■■□□ 2.89
MEN1-216ENST00000487019 RSF1Q96T23 1441 aaPredicted RBP33.03■■■□□ 2.88
MEN1-216ENST00000487019 CUX2O14529 1486 aa33.03■■■□□ 2.88
MEN1-216ENST00000487019 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
MEN1-216ENST00000487019 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
MEN1-216ENST00000487019 KIF21AQ7Z4S6 1674 aa32.84■■■□□ 2.85
MEN1-216ENST00000487019 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
MEN1-216ENST00000487019 THOC2Q8NI27 1593 aaKnown RBP32.81■■■□□ 2.84
MEN1-216ENST00000487019 CFTRP13569 1480 aa32.6■■■□□ 2.81
MEN1-216ENST00000487019 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
MEN1-216ENST00000487019 MRC2Q9UBG0 1479 aa32.54■■■□□ 2.8
MEN1-216ENST00000487019 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
MEN1-216ENST00000487019 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
MEN1-216ENST00000487019 WDR62O43379 1518 aa32.47■■■□□ 2.79
MEN1-216ENST00000487019 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
MEN1-216ENST00000487019 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
MEN1-216ENST00000487019 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
MEN1-216ENST00000487019 ABCC8Q09428 1581 aa31.99■■■□□ 2.71
MEN1-216ENST00000487019 TOPBP1Q92547 1522 aa31.93■■■□□ 2.7
MEN1-216ENST00000487019 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
MEN1-216ENST00000487019 IFT140Q96RY7 1462 aa31.85■■■□□ 2.69
MEN1-216ENST00000487019 SUPT5HO00267 1087 aaKnown RBP31.81■■■□□ 2.68
MEN1-216ENST00000487019 TARBP1Q13395 1621 aaKnown RBP31.64■■■□□ 2.66
MEN1-216ENST00000487019 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
MEN1-216ENST00000487019 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
MEN1-216ENST00000487019 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
MEN1-216ENST00000487019 CUX1P39880 1505 aa31.54■■■□□ 2.64
MEN1-216ENST00000487019 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
MEN1-216ENST00000487019 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
MEN1-216ENST00000487019 SOGA1O94964 1423 aa31.45■■■□□ 2.63
MEN1-216ENST00000487019 OSCARQ8IYS5 282 aa31.45■■■□□ 2.63
MEN1-216ENST00000487019 RAD54L2Q9Y4B4 1467 aa31.41■■■□□ 2.62
MEN1-216ENST00000487019 AQRO60306 1485 aaKnown RBP eCLIP31.39■■■□□ 2.62
MEN1-216ENST00000487019 CHD1O14646 1710 aa31.32■■■□□ 2.61
MEN1-216ENST00000487019 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
MEN1-216ENST00000487019 TOP2BQ02880 1626 aa31.25■■■□□ 2.59
MEN1-216ENST00000487019 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
MEN1-216ENST00000487019 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
MEN1-216ENST00000487019 PBRM1Q86U86 1689 aa31.21■■■□□ 2.59
MEN1-216ENST00000487019 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
MEN1-216ENST00000487019 GRIN2BQ13224 1484 aa31.2■■■□□ 2.58
MEN1-216ENST00000487019 MAGI1Q96QZ7 1491 aaPredicted RBP31.2■■■□□ 2.58
MEN1-216ENST00000487019 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
MEN1-216ENST00000487019 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
MEN1-216ENST00000487019 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
MEN1-216ENST00000487019 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
MEN1-216ENST00000487019 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
MEN1-216ENST00000487019 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
MEN1-216ENST00000487019 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
MEN1-216ENST00000487019 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
MEN1-216ENST00000487019 FBLN2P98095 1184 aa31.04■■■□□ 2.56
MEN1-216ENST00000487019 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
MEN1-216ENST00000487019 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
MEN1-216ENST00000487019 CHMP7Q8WUX9 453 aaPredicted RBP30.96■■■□□ 2.55
MEN1-216ENST00000487019 CLASP1Q7Z460 1538 aa30.93■■■□□ 2.54
MEN1-216ENST00000487019 ADAMTS12P58397 1594 aa30.89■■■□□ 2.54
MEN1-216ENST00000487019 ERICH3Q5RHP9 1530 aa30.88■■■□□ 2.53
MEN1-216ENST00000487019 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
MEN1-216ENST00000487019 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
MEN1-216ENST00000487019 ARAP1Q96P48 1450 aa30.72■■■□□ 2.51
MEN1-216ENST00000487019 NUP160Q12769 1436 aa30.66■■■□□ 2.5
MEN1-216ENST00000487019 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
MEN1-216ENST00000487019 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
MEN1-216ENST00000487019 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
MEN1-216ENST00000487019 CUL7Q14999 1698 aa30.59■■■□□ 2.49
MEN1-216ENST00000487019 SHROOM2Q13796 1616 aa30.54■■■□□ 2.48
MEN1-216ENST00000487019 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
MEN1-216ENST00000487019 IGF1RP08069 1367 aa30.42■■■□□ 2.46
MEN1-216ENST00000487019 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
MEN1-216ENST00000487019 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms