RNA–Protein interactions for RNA: ENST00000487007.1

CMTM7-206, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

TSL 5

Gene CMTM7, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-206ENST00000487007 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
CMTM7-206ENST00000487007 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
CMTM7-206ENST00000487007 ABCC9O60706 1549 aa24.46■■□□□ 1.51
CMTM7-206ENST00000487007 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
CMTM7-206ENST00000487007 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
CMTM7-206ENST00000487007 NACADO15069 1562 aa23.21■■□□□ 1.31
CMTM7-206ENST00000487007 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
CMTM7-206ENST00000487007 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
CMTM7-206ENST00000487007 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
CMTM7-206ENST00000487007 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
CMTM7-206ENST00000487007 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
CMTM7-206ENST00000487007 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
CMTM7-206ENST00000487007 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
CMTM7-206ENST00000487007 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
CMTM7-206ENST00000487007 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
CMTM7-206ENST00000487007 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
CMTM7-206ENST00000487007 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
CMTM7-206ENST00000487007 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
CMTM7-206ENST00000487007 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
CMTM7-206ENST00000487007 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
CMTM7-206ENST00000487007 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
CMTM7-206ENST00000487007 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
CMTM7-206ENST00000487007 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
CMTM7-206ENST00000487007 NCAPD3P42695 1498 aa21.39■■□□□ 1.02
CMTM7-206ENST00000487007 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
CMTM7-206ENST00000487007 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
CMTM7-206ENST00000487007 WIZO95785 1651 aa21.33■■□□□ 1
CMTM7-206ENST00000487007 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
CMTM7-206ENST00000487007 NESP48681 1621 aa21.16■□□□□ 0.98
CMTM7-206ENST00000487007 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
CMTM7-206ENST00000487007 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
CMTM7-206ENST00000487007 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
CMTM7-206ENST00000487007 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
CMTM7-206ENST00000487007 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
CMTM7-206ENST00000487007 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
CMTM7-206ENST00000487007 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
CMTM7-206ENST00000487007 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
CMTM7-206ENST00000487007 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
CMTM7-206ENST00000487007 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
CMTM7-206ENST00000487007 CUX2O14529 1486 aa20.71■□□□□ 0.91
CMTM7-206ENST00000487007 CFTRP13569 1480 aa20.67■□□□□ 0.9
CMTM7-206ENST00000487007 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
CMTM7-206ENST00000487007 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
CMTM7-206ENST00000487007 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
CMTM7-206ENST00000487007 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
CMTM7-206ENST00000487007 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
CMTM7-206ENST00000487007 WDR62O43379 1518 aa20.54■□□□□ 0.88
CMTM7-206ENST00000487007 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
CMTM7-206ENST00000487007 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
CMTM7-206ENST00000487007 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
CMTM7-206ENST00000487007 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
CMTM7-206ENST00000487007 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
CMTM7-206ENST00000487007 CUX1P39880 1505 aa20.17■□□□□ 0.82
CMTM7-206ENST00000487007 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
CMTM7-206ENST00000487007 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
CMTM7-206ENST00000487007 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
CMTM7-206ENST00000487007 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
CMTM7-206ENST00000487007 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
CMTM7-206ENST00000487007 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
CMTM7-206ENST00000487007 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
CMTM7-206ENST00000487007 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.8
CMTM7-206ENST00000487007 SOGA1O94964 1423 aa20.02■□□□□ 0.79
CMTM7-206ENST00000487007 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
CMTM7-206ENST00000487007 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
CMTM7-206ENST00000487007 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
CMTM7-206ENST00000487007 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
CMTM7-206ENST00000487007 CHD1O14646 1710 aa19.95■□□□□ 0.78
CMTM7-206ENST00000487007 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
CMTM7-206ENST00000487007 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
CMTM7-206ENST00000487007 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
CMTM7-206ENST00000487007 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
CMTM7-206ENST00000487007 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
CMTM7-206ENST00000487007 FBLN2P98095 1184 aa19.86■□□□□ 0.77
CMTM7-206ENST00000487007 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
CMTM7-206ENST00000487007 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
CMTM7-206ENST00000487007 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
CMTM7-206ENST00000487007 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
CMTM7-206ENST00000487007 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
CMTM7-206ENST00000487007 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
CMTM7-206ENST00000487007 RIMBP3CA6NJZ7 1639 aa19.7■□□□□ 0.74
CMTM7-206ENST00000487007 RIMBP3BA6NNM3 1639 aa19.7■□□□□ 0.74
CMTM7-206ENST00000487007 RIMBP3Q9UFD9 1639 aa19.7■□□□□ 0.74
CMTM7-206ENST00000487007 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
CMTM7-206ENST00000487007 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
CMTM7-206ENST00000487007 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
CMTM7-206ENST00000487007 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
CMTM7-206ENST00000487007 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
CMTM7-206ENST00000487007 CLASP1Q7Z460 1538 aa19.6■□□□□ 0.73
CMTM7-206ENST00000487007 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
CMTM7-206ENST00000487007 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
CMTM7-206ENST00000487007 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
CMTM7-206ENST00000487007 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
CMTM7-206ENST00000487007 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
CMTM7-206ENST00000487007 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
CMTM7-206ENST00000487007 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
CMTM7-206ENST00000487007 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
CMTM7-206ENST00000487007 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
CMTM7-206ENST00000487007 NUP160Q12769 1436 aa19.42■□□□□ 0.7
CMTM7-206ENST00000487007 CUL7Q14999 1698 aa19.41■□□□□ 0.7
CMTM7-206ENST00000487007 IGF1RP08069 1367 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms