RNA–Protein interactions for RNA: ENST00000486943.1

CACNA1F-206, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 3

Gene CACNA1F, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-206ENST00000486943 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
CACNA1F-206ENST00000486943 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
CACNA1F-206ENST00000486943 ABCC9O60706 1549 aa31.35■■■□□ 2.61
CACNA1F-206ENST00000486943 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
CACNA1F-206ENST00000486943 NACADO15069 1562 aa30.03■■■□□ 2.4
CACNA1F-206ENST00000486943 MYO15BQ96JP2 1530 aa29.77■■■□□ 2.36
CACNA1F-206ENST00000486943 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
CACNA1F-206ENST00000486943 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
CACNA1F-206ENST00000486943 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
CACNA1F-206ENST00000486943 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
CACNA1F-206ENST00000486943 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
CACNA1F-206ENST00000486943 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
CACNA1F-206ENST00000486943 DNAJC5BQ9UF47 199 aa28.99■■■□□ 2.23
CACNA1F-206ENST00000486943 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
CACNA1F-206ENST00000486943 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
CACNA1F-206ENST00000486943 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
CACNA1F-206ENST00000486943 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
CACNA1F-206ENST00000486943 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
CACNA1F-206ENST00000486943 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
CACNA1F-206ENST00000486943 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
CACNA1F-206ENST00000486943 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
CACNA1F-206ENST00000486943 SMARCA2P51531 1590 aa27.62■■■□□ 2.01
CACNA1F-206ENST00000486943 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
CACNA1F-206ENST00000486943 HMGXB3Q12766 1538 aa27.56■■■□□ 2
CACNA1F-206ENST00000486943 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
CACNA1F-206ENST00000486943 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
CACNA1F-206ENST00000486943 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
CACNA1F-206ENST00000486943 WIZO95785 1651 aa27.12■■□□□ 1.93
CACNA1F-206ENST00000486943 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
CACNA1F-206ENST00000486943 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
CACNA1F-206ENST00000486943 NESP48681 1621 aa27.04■■□□□ 1.92
CACNA1F-206ENST00000486943 CUX2O14529 1486 aa26.97■■□□□ 1.91
CACNA1F-206ENST00000486943 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
CACNA1F-206ENST00000486943 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
CACNA1F-206ENST00000486943 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
CACNA1F-206ENST00000486943 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
CACNA1F-206ENST00000486943 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
CACNA1F-206ENST00000486943 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
CACNA1F-206ENST00000486943 CFTRP13569 1480 aa26.61■■□□□ 1.85
CACNA1F-206ENST00000486943 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
CACNA1F-206ENST00000486943 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
CACNA1F-206ENST00000486943 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
CACNA1F-206ENST00000486943 WDR62O43379 1518 aa26.52■■□□□ 1.84
CACNA1F-206ENST00000486943 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
CACNA1F-206ENST00000486943 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
CACNA1F-206ENST00000486943 DNAJC5Q9H3Z4 198 aa26.41■■□□□ 1.82
CACNA1F-206ENST00000486943 URB2Q14146 1524 aaKnown RBP26.27■■□□□ 1.8
CACNA1F-206ENST00000486943 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
CACNA1F-206ENST00000486943 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
CACNA1F-206ENST00000486943 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
CACNA1F-206ENST00000486943 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
CACNA1F-206ENST00000486943 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
CACNA1F-206ENST00000486943 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
CACNA1F-206ENST00000486943 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
CACNA1F-206ENST00000486943 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
CACNA1F-206ENST00000486943 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
CACNA1F-206ENST00000486943 CUX1P39880 1505 aa25.74■■□□□ 1.71
CACNA1F-206ENST00000486943 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
CACNA1F-206ENST00000486943 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
CACNA1F-206ENST00000486943 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
CACNA1F-206ENST00000486943 SOGA1O94964 1423 aa25.67■■□□□ 1.7
CACNA1F-206ENST00000486943 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
CACNA1F-206ENST00000486943 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.69
CACNA1F-206ENST00000486943 CHD1O14646 1710 aa25.57■■□□□ 1.68
CACNA1F-206ENST00000486943 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
CACNA1F-206ENST00000486943 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
CACNA1F-206ENST00000486943 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
CACNA1F-206ENST00000486943 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
CACNA1F-206ENST00000486943 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
CACNA1F-206ENST00000486943 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
CACNA1F-206ENST00000486943 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
CACNA1F-206ENST00000486943 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
CACNA1F-206ENST00000486943 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
CACNA1F-206ENST00000486943 ABCA5Q8WWZ7 1642 aa25.44■■□□□ 1.66
CACNA1F-206ENST00000486943 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
CACNA1F-206ENST00000486943 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
CACNA1F-206ENST00000486943 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
CACNA1F-206ENST00000486943 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
CACNA1F-206ENST00000486943 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
CACNA1F-206ENST00000486943 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
CACNA1F-206ENST00000486943 FBLN2P98095 1184 aa25.34■■□□□ 1.65
CACNA1F-206ENST00000486943 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
CACNA1F-206ENST00000486943 SYNJ2O15056 1496 aa25.33■■□□□ 1.65
CACNA1F-206ENST00000486943 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
CACNA1F-206ENST00000486943 CHMP7Q8WUX9 453 aaPredicted RBP25.26■■□□□ 1.63
CACNA1F-206ENST00000486943 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
CACNA1F-206ENST00000486943 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
CACNA1F-206ENST00000486943 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
CACNA1F-206ENST00000486943 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
CACNA1F-206ENST00000486943 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
CACNA1F-206ENST00000486943 NUP160Q12769 1436 aa25.03■■□□□ 1.6
CACNA1F-206ENST00000486943 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
CACNA1F-206ENST00000486943 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
CACNA1F-206ENST00000486943 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
CACNA1F-206ENST00000486943 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
CACNA1F-206ENST00000486943 CUL7Q14999 1698 aa24.93■■□□□ 1.58
CACNA1F-206ENST00000486943 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
CACNA1F-206ENST00000486943 IGF1RP08069 1367 aa24.83■■□□□ 1.57
CACNA1F-206ENST00000486943 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
CACNA1F-206ENST00000486943 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms