RNA–Protein interactions for RNA: ENST00000486931.1

MRPL23-210, Transcript of mitochondrial ribosomal protein L23, humanhuman

TSL 3

Gene MRPL23, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL23-210ENST00000486931 NISCHQ9Y2I1 1504 aa52.81■■■■■ 6.04
MRPL23-210ENST00000486931 ABCC9O60706 1549 aa48.39■■■■■ 5.34
MRPL23-210ENST00000486931 CCDC180Q9P1Z9 1646 aa47.67■■■■■ 5.22
MRPL23-210ENST00000486931 DNAJC5BQ9UF47 199 aa46.16■■■■■ 4.98
MRPL23-210ENST00000486931 RB1CC1Q8TDY2 1594 aa45.68■■■■■ 4.9
MRPL23-210ENST00000486931 NACADO15069 1562 aa45.21■■■■■ 4.83
MRPL23-210ENST00000486931 PABPN1Q86U42 306 aaKnown RBP eCLIP44.95■■■■■ 4.79
MRPL23-210ENST00000486931 UNC13AQ9UPW8 1703 aa44.8■■■■■ 4.76
MRPL23-210ENST00000486931 DCAF8L2P0C7V8 631 aa44.75■■■■■ 4.75
MRPL23-210ENST00000486931 BICRAQ9NZM4 1560 aa44.54■■■■■ 4.72
MRPL23-210ENST00000486931 MYO15BQ96JP2 1530 aa44.37■■■■■ 4.69
MRPL23-210ENST00000486931 ZCCHC6Q5VYS8 1495 aaKnown RBP43.88■■■■■ 4.61
MRPL23-210ENST00000486931 CC2D2AQ9P2K1 1620 aa43.7■■■■■ 4.59
MRPL23-210ENST00000486931 SHROOM4Q9ULL8 1493 aa43.69■■■■■ 4.58
MRPL23-210ENST00000486931 DCAF1Q9Y4B6 1507 aa43.66■■■■■ 4.58
MRPL23-210ENST00000486931 CECR2Q9BXF3 1484 aa43.64■■■■■ 4.58
MRPL23-210ENST00000486931 EIF4G1Q04637 1599 aaKnown RBP43.41■■■■■ 4.54
MRPL23-210ENST00000486931 SCRIBQ14160 1630 aa43.41■■■■■ 4.54
MRPL23-210ENST00000486931 DNAJC5Q9H3Z4 198 aa42.79■■■■■ 4.44
MRPL23-210ENST00000486931 CUX2O14529 1486 aa41.96■■■■■ 4.31
MRPL23-210ENST00000486931 NCAPD3P42695 1498 aa41.79■■■■■ 4.28
MRPL23-210ENST00000486931 ERCC6Q03468 1493 aa41.73■■■■■ 4.27
MRPL23-210ENST00000486931 ATAD2BQ9ULI0 1458 aa41.57■■■■■ 4.25
MRPL23-210ENST00000486931 NESP48681 1621 aa41.43■■■■■ 4.22
MRPL23-210ENST00000486931 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
MRPL23-210ENST00000486931 SMARCA4P51532 1647 aa41.35■■■■■ 4.21
MRPL23-210ENST00000486931 SMARCA2P51531 1590 aa41.34■■■■■ 4.21
MRPL23-210ENST00000486931 THOC2Q8NI27 1593 aaKnown RBP41.14■■■■■ 4.18
MRPL23-210ENST00000486931 BAZ1BQ9UIG0 1483 aaKnown RBP41.07■■■■■ 4.16
MRPL23-210ENST00000486931 BAZ1AQ9NRL2 1556 aaPredicted RBP40.98■■■■■ 4.15
MRPL23-210ENST00000486931 PEG3Q9GZU2 1588 aa40.96■■■■■ 4.15
MRPL23-210ENST00000486931 LAMC3Q9Y6N6 1575 aa40.92■■■■■ 4.14
MRPL23-210ENST00000486931 KIF21AQ7Z4S6 1674 aa40.85■■■■■ 4.13
MRPL23-210ENST00000486931 MROH2BQ7Z745 1585 aa40.73■■■■■ 4.11
MRPL23-210ENST00000486931 PDS5BQ9NTI5 1447 aa40.67■■■■■ 4.1
MRPL23-210ENST00000486931 TRIM41Q8WV44 630 aa40.55■■■■■ 4.08
MRPL23-210ENST00000486931 CADPSQ9ULU8 1353 aa40.46■■■■■ 4.07
MRPL23-210ENST00000486931 MRC2Q9UBG0 1479 aa40.41■■■■■ 4.06
MRPL23-210ENST00000486931 WDR62O43379 1518 aa40.37■■■■■ 4.05
MRPL23-210ENST00000486931 WIZO95785 1651 aa40.21■■■■■ 4.03
MRPL23-210ENST00000486931 CEP164Q9UPV0 1460 aa40.08■■■■■ 4.01
MRPL23-210ENST00000486931 FANCD2Q9BXW9 1451 aa40■■■■□ 3.99
MRPL23-210ENST00000486931 RSF1Q96T23 1441 aaPredicted RBP40■■■■□ 3.99
MRPL23-210ENST00000486931 OSCARQ8IYS5 282 aa39.88■■■■□ 3.97
MRPL23-210ENST00000486931 CFTRP13569 1480 aa39.88■■■■□ 3.97
MRPL23-210ENST00000486931 URB2Q14146 1524 aaKnown RBP39.79■■■■□ 3.96
MRPL23-210ENST00000486931 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
MRPL23-210ENST00000486931 RIMBP3CA6NJZ7 1639 aa39.55■■■■□ 3.92
MRPL23-210ENST00000486931 RIMBP3BA6NNM3 1639 aa39.55■■■■□ 3.92
MRPL23-210ENST00000486931 RIMBP3Q9UFD9 1639 aa39.55■■■■□ 3.92
MRPL23-210ENST00000486931 ZNF608Q9ULD9 1512 aaPredicted RBP39.43■■■■□ 3.9
MRPL23-210ENST00000486931 PRDM2Q13029 1718 aa39.4■■■■□ 3.9
MRPL23-210ENST00000486931 ARHGEF11O15085 1522 aa39.33■■■■□ 3.89
MRPL23-210ENST00000486931 IFT140Q96RY7 1462 aa39.31■■■■□ 3.88
MRPL23-210ENST00000486931 CCDC88BA6NC98 1476 aa39.26■■■■□ 3.88
MRPL23-210ENST00000486931 TOPBP1Q92547 1522 aa39.19■■■■□ 3.86
MRPL23-210ENST00000486931 EIF4G3O43432 1585 aaKnown RBP39.13■■■■□ 3.85
MRPL23-210ENST00000486931 CYB5RLQ6IPT4 315 aa39.03■■■■□ 3.84
MRPL23-210ENST00000486931 CHD1O14646 1710 aa38.99■■■■□ 3.83
MRPL23-210ENST00000486931 DNMBPQ6XZF7 1577 aa38.96■■■■□ 3.83
MRPL23-210ENST00000486931 TARBP1Q13395 1621 aaKnown RBP38.95■■■■□ 3.83
MRPL23-210ENST00000486931 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
MRPL23-210ENST00000486931 AQRO60306 1485 aaKnown RBP eCLIP38.94■■■■□ 3.82
MRPL23-210ENST00000486931 ARAP1Q96P48 1450 aa38.93■■■■□ 3.82
MRPL23-210ENST00000486931 POLA1P09884 1462 aaPredicted RBP38.76■■■■□ 3.8
MRPL23-210ENST00000486931 TRHP20396 242 aaPredicted RBP38.75■■■■□ 3.79
MRPL23-210ENST00000486931 FBLN2P98095 1184 aa38.71■■■■□ 3.79
MRPL23-210ENST00000486931 RAD54L2Q9Y4B4 1467 aa38.65■■■■□ 3.78
MRPL23-210ENST00000486931 TDRD9Q8NDG6 1382 aaKnown RBP38.57■■■■□ 3.76
MRPL23-210ENST00000486931 CLASP1Q7Z460 1538 aa38.54■■■■□ 3.76
MRPL23-210ENST00000486931 SOGA1O94964 1423 aa38.52■■■■□ 3.76
MRPL23-210ENST00000486931 SNAPC4Q5SXM2 1469 aa38.5■■■■□ 3.75
MRPL23-210ENST00000486931 SUPT5HO00267 1087 aaKnown RBP38.44■■■■□ 3.74
MRPL23-210ENST00000486931 FGD5Q6ZNL6 1462 aa38.4■■■■□ 3.74
MRPL23-210ENST00000486931 WDR97A6NE52 1622 aa38.38■■■■□ 3.74
MRPL23-210ENST00000486931 SYNJ1O43426 1573 aa38.35■■■■□ 3.73
MRPL23-210ENST00000486931 MAGI1Q96QZ7 1491 aaPredicted RBP38.33■■■■□ 3.73
MRPL23-210ENST00000486931 CHMP7Q8WUX9 453 aaPredicted RBP38.31■■■■□ 3.72
MRPL23-210ENST00000486931 CUX1P39880 1505 aa38.29■■■■□ 3.72
MRPL23-210ENST00000486931 GRIN2BQ13224 1484 aa38.26■■■■□ 3.72
MRPL23-210ENST00000486931 SYNJ2O15056 1496 aa38.22■■■■□ 3.71
MRPL23-210ENST00000486931 GAPVD1Q14C86 1478 aa38.11■■■■□ 3.69
MRPL23-210ENST00000486931 PBRM1Q86U86 1689 aa38.11■■■■□ 3.69
MRPL23-210ENST00000486931 AEBP2Q6ZN18 517 aaPredicted RBP38.1■■■■□ 3.69
MRPL23-210ENST00000486931 ABCA5Q8WWZ7 1642 aa37.96■■■■□ 3.67
MRPL23-210ENST00000486931 ERCC6L2Q5T890 1561 aa37.95■■■■□ 3.67
MRPL23-210ENST00000486931 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
MRPL23-210ENST00000486931 GRIN2AQ12879 1464 aa37.79■■■■□ 3.64
MRPL23-210ENST00000486931 CEP170Q5SW79 1584 aa37.76■■■■□ 3.63
MRPL23-210ENST00000486931 BIVM-ERCC5R4GMW8 1640 aa37.73■■■■□ 3.63
MRPL23-210ENST00000486931 NUP160Q12769 1436 aa37.72■■■■□ 3.63
MRPL23-210ENST00000486931 TOP2BQ02880 1626 aa37.71■■■■□ 3.63
MRPL23-210ENST00000486931 ADAMTS12P58397 1594 aa37.71■■■■□ 3.63
MRPL23-210ENST00000486931 WRNQ14191 1432 aaPredicted RBP eCLIP37.69■■■■□ 3.62
MRPL23-210ENST00000486931 SHROOM2Q13796 1616 aa37.66■■■■□ 3.62
MRPL23-210ENST00000486931 KIF13AQ9H1H9 1805 aa37.57■■■■□ 3.61
MRPL23-210ENST00000486931 FHAD1B1AJZ9 1412 aa37.52■■■■□ 3.6
MRPL23-210ENST00000486931 ERICH3Q5RHP9 1530 aa37.4■■■■□ 3.58
MRPL23-210ENST00000486931 PRG4Q92954 1404 aaPredicted RBP37.37■■■■□ 3.57
MRPL23-210ENST00000486931 JPH4Q96JJ6 628 aa37.28■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms