RNA–Protein interactions for RNA: ENST00000486922.1

SFTPA1-206, Transcript of surfactant protein A1, humanhuman

TSL 5

Gene SFTPA1, Length 342 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-206ENST00000486922 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
SFTPA1-206ENST00000486922 ABCC9O60706 1549 aa32.98■■■□□ 2.87
SFTPA1-206ENST00000486922 CCDC180Q9P1Z9 1646 aa32.5■■■□□ 2.79
SFTPA1-206ENST00000486922 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
SFTPA1-206ENST00000486922 RB1CC1Q8TDY2 1594 aa31.15■■■□□ 2.58
SFTPA1-206ENST00000486922 NACADO15069 1562 aa30.83■■■□□ 2.53
SFTPA1-206ENST00000486922 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
SFTPA1-206ENST00000486922 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
SFTPA1-206ENST00000486922 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
SFTPA1-206ENST00000486922 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
SFTPA1-206ENST00000486922 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
SFTPA1-206ENST00000486922 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
SFTPA1-206ENST00000486922 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
SFTPA1-206ENST00000486922 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SFTPA1-206ENST00000486922 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
SFTPA1-206ENST00000486922 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
SFTPA1-206ENST00000486922 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
SFTPA1-206ENST00000486922 DNAJC5Q9H3Z4 198 aa29.46■■■□□ 2.31
SFTPA1-206ENST00000486922 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
SFTPA1-206ENST00000486922 CUX2O14529 1486 aa28.73■■■□□ 2.19
SFTPA1-206ENST00000486922 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
SFTPA1-206ENST00000486922 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
SFTPA1-206ENST00000486922 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
SFTPA1-206ENST00000486922 NESP48681 1621 aa28.22■■■□□ 2.11
SFTPA1-206ENST00000486922 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
SFTPA1-206ENST00000486922 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
SFTPA1-206ENST00000486922 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
SFTPA1-206ENST00000486922 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
SFTPA1-206ENST00000486922 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
SFTPA1-206ENST00000486922 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
SFTPA1-206ENST00000486922 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
SFTPA1-206ENST00000486922 KIF21AQ7Z4S6 1674 aa27.85■■■□□ 2.05
SFTPA1-206ENST00000486922 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
SFTPA1-206ENST00000486922 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
SFTPA1-206ENST00000486922 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
SFTPA1-206ENST00000486922 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
SFTPA1-206ENST00000486922 WDR62O43379 1518 aa27.57■■■□□ 2
SFTPA1-206ENST00000486922 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
SFTPA1-206ENST00000486922 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
SFTPA1-206ENST00000486922 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
SFTPA1-206ENST00000486922 WIZO95785 1651 aa27.27■■□□□ 1.96
SFTPA1-206ENST00000486922 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
SFTPA1-206ENST00000486922 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
SFTPA1-206ENST00000486922 CFTRP13569 1480 aa27.15■■□□□ 1.94
SFTPA1-206ENST00000486922 URB2Q14146 1524 aaKnown RBP27.1■■□□□ 1.93
SFTPA1-206ENST00000486922 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
SFTPA1-206ENST00000486922 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
SFTPA1-206ENST00000486922 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
SFTPA1-206ENST00000486922 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
SFTPA1-206ENST00000486922 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
SFTPA1-206ENST00000486922 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
SFTPA1-206ENST00000486922 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
SFTPA1-206ENST00000486922 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
SFTPA1-206ENST00000486922 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
SFTPA1-206ENST00000486922 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
SFTPA1-206ENST00000486922 EIF4G3O43432 1585 aaKnown RBP26.65■■□□□ 1.86
SFTPA1-206ENST00000486922 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
SFTPA1-206ENST00000486922 ARAP1Q96P48 1450 aa26.61■■□□□ 1.85
SFTPA1-206ENST00000486922 CHD1O14646 1710 aa26.59■■□□□ 1.85
SFTPA1-206ENST00000486922 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
SFTPA1-206ENST00000486922 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
SFTPA1-206ENST00000486922 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
SFTPA1-206ENST00000486922 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
SFTPA1-206ENST00000486922 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
SFTPA1-206ENST00000486922 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
SFTPA1-206ENST00000486922 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
SFTPA1-206ENST00000486922 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
SFTPA1-206ENST00000486922 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
SFTPA1-206ENST00000486922 FBLN2P98095 1184 aa26.24■■□□□ 1.79
SFTPA1-206ENST00000486922 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
SFTPA1-206ENST00000486922 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
SFTPA1-206ENST00000486922 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
SFTPA1-206ENST00000486922 SOGA1O94964 1423 aa26.15■■□□□ 1.78
SFTPA1-206ENST00000486922 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
SFTPA1-206ENST00000486922 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
SFTPA1-206ENST00000486922 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
SFTPA1-206ENST00000486922 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
SFTPA1-206ENST00000486922 SYNJ2O15056 1496 aa26.03■■□□□ 1.76
SFTPA1-206ENST00000486922 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
SFTPA1-206ENST00000486922 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
SFTPA1-206ENST00000486922 CUX1P39880 1505 aa26■■□□□ 1.75
SFTPA1-206ENST00000486922 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
SFTPA1-206ENST00000486922 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
SFTPA1-206ENST00000486922 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
SFTPA1-206ENST00000486922 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
SFTPA1-206ENST00000486922 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
SFTPA1-206ENST00000486922 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
SFTPA1-206ENST00000486922 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
SFTPA1-206ENST00000486922 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
SFTPA1-206ENST00000486922 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
SFTPA1-206ENST00000486922 NUP160Q12769 1436 aa25.71■■□□□ 1.71
SFTPA1-206ENST00000486922 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
SFTPA1-206ENST00000486922 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
SFTPA1-206ENST00000486922 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
SFTPA1-206ENST00000486922 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
SFTPA1-206ENST00000486922 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
SFTPA1-206ENST00000486922 ABCC10Q5T3U5 1492 aa25.42■■□□□ 1.66
SFTPA1-206ENST00000486922 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
SFTPA1-206ENST00000486922 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
SFTPA1-206ENST00000486922 MAPKBP1O60336 1514 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms