RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
ARHGEF3-211ENST00000486829 CCDC180Q9P1Z9 1646 aa24.05■■□□□ 1.44
ARHGEF3-211ENST00000486829 ABCC9O60706 1549 aa23.69■■□□□ 1.38
ARHGEF3-211ENST00000486829 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
ARHGEF3-211ENST00000486829 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
ARHGEF3-211ENST00000486829 NACADO15069 1562 aa22.62■■□□□ 1.21
ARHGEF3-211ENST00000486829 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.21
ARHGEF3-211ENST00000486829 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
ARHGEF3-211ENST00000486829 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
ARHGEF3-211ENST00000486829 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
ARHGEF3-211ENST00000486829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
ARHGEF3-211ENST00000486829 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
ARHGEF3-211ENST00000486829 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
ARHGEF3-211ENST00000486829 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
ARHGEF3-211ENST00000486829 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
ARHGEF3-211ENST00000486829 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
ARHGEF3-211ENST00000486829 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
ARHGEF3-211ENST00000486829 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
ARHGEF3-211ENST00000486829 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
ARHGEF3-211ENST00000486829 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
ARHGEF3-211ENST00000486829 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
ARHGEF3-211ENST00000486829 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
ARHGEF3-211ENST00000486829 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
ARHGEF3-211ENST00000486829 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
ARHGEF3-211ENST00000486829 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
ARHGEF3-211ENST00000486829 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
ARHGEF3-211ENST00000486829 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF3-211ENST00000486829 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
ARHGEF3-211ENST00000486829 WIZO95785 1651 aa20.63■□□□□ 0.89
ARHGEF3-211ENST00000486829 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
ARHGEF3-211ENST00000486829 NESP48681 1621 aa20.46■□□□□ 0.87
ARHGEF3-211ENST00000486829 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
ARHGEF3-211ENST00000486829 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
ARHGEF3-211ENST00000486829 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
ARHGEF3-211ENST00000486829 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
ARHGEF3-211ENST00000486829 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
ARHGEF3-211ENST00000486829 CUX2O14529 1486 aa20.24■□□□□ 0.83
ARHGEF3-211ENST00000486829 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ARHGEF3-211ENST00000486829 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
ARHGEF3-211ENST00000486829 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
ARHGEF3-211ENST00000486829 CFTRP13569 1480 aa20.1■□□□□ 0.81
ARHGEF3-211ENST00000486829 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
ARHGEF3-211ENST00000486829 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
ARHGEF3-211ENST00000486829 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
ARHGEF3-211ENST00000486829 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
ARHGEF3-211ENST00000486829 WDR62O43379 1518 aa19.97■□□□□ 0.79
ARHGEF3-211ENST00000486829 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
ARHGEF3-211ENST00000486829 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
ARHGEF3-211ENST00000486829 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
ARHGEF3-211ENST00000486829 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
ARHGEF3-211ENST00000486829 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
ARHGEF3-211ENST00000486829 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
ARHGEF3-211ENST00000486829 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
ARHGEF3-211ENST00000486829 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF3-211ENST00000486829 CUX1P39880 1505 aa19.54■□□□□ 0.72
ARHGEF3-211ENST00000486829 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
ARHGEF3-211ENST00000486829 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF3-211ENST00000486829 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
ARHGEF3-211ENST00000486829 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
ARHGEF3-211ENST00000486829 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
ARHGEF3-211ENST00000486829 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
ARHGEF3-211ENST00000486829 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
ARHGEF3-211ENST00000486829 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
ARHGEF3-211ENST00000486829 SOGA1O94964 1423 aa19.43■□□□□ 0.7
ARHGEF3-211ENST00000486829 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.7
ARHGEF3-211ENST00000486829 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
ARHGEF3-211ENST00000486829 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
ARHGEF3-211ENST00000486829 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
ARHGEF3-211ENST00000486829 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
ARHGEF3-211ENST00000486829 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
ARHGEF3-211ENST00000486829 CHD1O14646 1710 aa19.3■□□□□ 0.68
ARHGEF3-211ENST00000486829 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
ARHGEF3-211ENST00000486829 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
ARHGEF3-211ENST00000486829 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
ARHGEF3-211ENST00000486829 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
ARHGEF3-211ENST00000486829 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
ARHGEF3-211ENST00000486829 FBLN2P98095 1184 aa19.2■□□□□ 0.66
ARHGEF3-211ENST00000486829 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
ARHGEF3-211ENST00000486829 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF3-211ENST00000486829 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
ARHGEF3-211ENST00000486829 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
ARHGEF3-211ENST00000486829 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
ARHGEF3-211ENST00000486829 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
ARHGEF3-211ENST00000486829 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
ARHGEF3-211ENST00000486829 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF3-211ENST00000486829 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
ARHGEF3-211ENST00000486829 EEA1Q15075 1411 aa19.08■□□□□ 0.65
ARHGEF3-211ENST00000486829 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
ARHGEF3-211ENST00000486829 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
ARHGEF3-211ENST00000486829 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
ARHGEF3-211ENST00000486829 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
ARHGEF3-211ENST00000486829 IGF1RP08069 1367 aa18.99■□□□□ 0.63
ARHGEF3-211ENST00000486829 CUL7Q14999 1698 aa18.98■□□□□ 0.63
ARHGEF3-211ENST00000486829 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
ARHGEF3-211ENST00000486829 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
ARHGEF3-211ENST00000486829 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
ARHGEF3-211ENST00000486829 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
ARHGEF3-211ENST00000486829 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
ARHGEF3-211ENST00000486829 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
ARHGEF3-211ENST00000486829 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms