RNA–Protein interactions for RNA: ENST00000486773.1

SHE-202, Transcript of Src homology 2 domain containing E, humanhuman

TSL 3

Gene SHE, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-202ENST00000486773 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
SHE-202ENST00000486773 ABCC9O60706 1549 aa26.84■■□□□ 1.89
SHE-202ENST00000486773 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
SHE-202ENST00000486773 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
SHE-202ENST00000486773 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
SHE-202ENST00000486773 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
SHE-202ENST00000486773 NACADO15069 1562 aa24.79■■□□□ 1.56
SHE-202ENST00000486773 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
SHE-202ENST00000486773 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
SHE-202ENST00000486773 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
SHE-202ENST00000486773 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
SHE-202ENST00000486773 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
SHE-202ENST00000486773 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
SHE-202ENST00000486773 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
SHE-202ENST00000486773 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
SHE-202ENST00000486773 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
SHE-202ENST00000486773 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
SHE-202ENST00000486773 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
SHE-202ENST00000486773 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
SHE-202ENST00000486773 CUX2O14529 1486 aa23.44■■□□□ 1.34
SHE-202ENST00000486773 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
SHE-202ENST00000486773 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
SHE-202ENST00000486773 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
SHE-202ENST00000486773 NESP48681 1621 aa22.82■■□□□ 1.24
SHE-202ENST00000486773 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
SHE-202ENST00000486773 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
SHE-202ENST00000486773 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
SHE-202ENST00000486773 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
SHE-202ENST00000486773 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
SHE-202ENST00000486773 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
SHE-202ENST00000486773 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
SHE-202ENST00000486773 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SHE-202ENST00000486773 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
SHE-202ENST00000486773 BAZ1AQ9NRL2 1556 aaPredicted RBP22.35■■□□□ 1.17
SHE-202ENST00000486773 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
SHE-202ENST00000486773 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
SHE-202ENST00000486773 WDR62O43379 1518 aa22.25■■□□□ 1.15
SHE-202ENST00000486773 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
SHE-202ENST00000486773 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
SHE-202ENST00000486773 RIMBP3CA6NJZ7 1639 aa22.08■■□□□ 1.13
SHE-202ENST00000486773 RIMBP3BA6NNM3 1639 aa22.08■■□□□ 1.13
SHE-202ENST00000486773 RIMBP3Q9UFD9 1639 aa22.08■■□□□ 1.13
SHE-202ENST00000486773 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
SHE-202ENST00000486773 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
SHE-202ENST00000486773 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
SHE-202ENST00000486773 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
SHE-202ENST00000486773 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
SHE-202ENST00000486773 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
SHE-202ENST00000486773 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
SHE-202ENST00000486773 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
SHE-202ENST00000486773 WIZO95785 1651 aa21.75■■□□□ 1.07
SHE-202ENST00000486773 CFTRP13569 1480 aa21.72■■□□□ 1.07
SHE-202ENST00000486773 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
SHE-202ENST00000486773 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
SHE-202ENST00000486773 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
SHE-202ENST00000486773 CHD1O14646 1710 aa21.55■■□□□ 1.04
SHE-202ENST00000486773 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
SHE-202ENST00000486773 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
SHE-202ENST00000486773 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
SHE-202ENST00000486773 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
SHE-202ENST00000486773 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
SHE-202ENST00000486773 FBLN2P98095 1184 aa21.38■■□□□ 1.01
SHE-202ENST00000486773 AQRO60306 1485 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHE-202ENST00000486773 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
SHE-202ENST00000486773 ABCC8Q09428 1581 aa21.28■■□□□ 1
SHE-202ENST00000486773 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
SHE-202ENST00000486773 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
SHE-202ENST00000486773 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SHE-202ENST00000486773 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
SHE-202ENST00000486773 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.98
SHE-202ENST00000486773 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
SHE-202ENST00000486773 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
SHE-202ENST00000486773 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
SHE-202ENST00000486773 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
SHE-202ENST00000486773 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
SHE-202ENST00000486773 SOGA1O94964 1423 aa21.02■□□□□ 0.96
SHE-202ENST00000486773 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
SHE-202ENST00000486773 WDR97A6NE52 1622 aa21■□□□□ 0.95
SHE-202ENST00000486773 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
SHE-202ENST00000486773 ILDR1Q86SU0 546 aaPredicted RBP20.95■□□□□ 0.94
SHE-202ENST00000486773 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
SHE-202ENST00000486773 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
SHE-202ENST00000486773 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
SHE-202ENST00000486773 KIF13AQ9H1H9 1805 aa20.87■□□□□ 0.93
SHE-202ENST00000486773 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
SHE-202ENST00000486773 CUX1P39880 1505 aa20.75■□□□□ 0.91
SHE-202ENST00000486773 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
SHE-202ENST00000486773 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
SHE-202ENST00000486773 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
SHE-202ENST00000486773 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
SHE-202ENST00000486773 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
SHE-202ENST00000486773 NUP160Q12769 1436 aa20.62■□□□□ 0.89
SHE-202ENST00000486773 KDM6BO15054 1643 aa20.61■□□□□ 0.89
SHE-202ENST00000486773 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
SHE-202ENST00000486773 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
SHE-202ENST00000486773 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
SHE-202ENST00000486773 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
SHE-202ENST00000486773 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
SHE-202ENST00000486773 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
SHE-202ENST00000486773 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms