RNA–Protein interactions for RNA: ENST00000486702.1

GPC2-204, Transcript of glypican 2, humanhuman

TSL 3

Gene GPC2, Length 787 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC2-204ENST00000486702 NISCHQ9Y2I1 1504 aa55.04■■■■■ 6.4
GPC2-204ENST00000486702 ABCC9O60706 1549 aa49.16■■■■■ 5.46
GPC2-204ENST00000486702 CCDC180Q9P1Z9 1646 aa49.09■■■■■ 5.45
GPC2-204ENST00000486702 DCAF8L2P0C7V8 631 aa46.76■■■■■ 5.08
GPC2-204ENST00000486702 RB1CC1Q8TDY2 1594 aa46.71■■■■■ 5.07
GPC2-204ENST00000486702 NACADO15069 1562 aa46.42■■■■■ 5.02
GPC2-204ENST00000486702 DNAJC5BQ9UF47 199 aa45.97■■■■■ 4.95
GPC2-204ENST00000486702 PABPN1Q86U42 306 aaKnown RBP eCLIP45.95■■■■■ 4.95
GPC2-204ENST00000486702 MYO15BQ96JP2 1530 aa45.73■■■■■ 4.91
GPC2-204ENST00000486702 UNC13AQ9UPW8 1703 aa45.68■■■■■ 4.9
GPC2-204ENST00000486702 ZCCHC6Q5VYS8 1495 aaKnown RBP45.61■■■■■ 4.89
GPC2-204ENST00000486702 BICRAQ9NZM4 1560 aa45.38■■■■■ 4.86
GPC2-204ENST00000486702 DCAF1Q9Y4B6 1507 aa45.3■■■■■ 4.84
GPC2-204ENST00000486702 SCRIBQ14160 1630 aa45.01■■■■■ 4.8
GPC2-204ENST00000486702 SHROOM4Q9ULL8 1493 aa44.53■■■■■ 4.72
GPC2-204ENST00000486702 CC2D2AQ9P2K1 1620 aa44.31■■■■■ 4.68
GPC2-204ENST00000486702 EIF4G1Q04637 1599 aaKnown RBP44.24■■■■■ 4.67
GPC2-204ENST00000486702 CECR2Q9BXF3 1484 aa44.17■■■■■ 4.66
GPC2-204ENST00000486702 NCAPD3P42695 1498 aa42.89■■■■■ 4.46
GPC2-204ENST00000486702 ATAD2BQ9ULI0 1458 aa42.87■■■■■ 4.45
GPC2-204ENST00000486702 SMARCA4P51532 1647 aa42.86■■■■■ 4.45
GPC2-204ENST00000486702 SMARCA2P51531 1590 aa42.68■■■■■ 4.42
GPC2-204ENST00000486702 BAZ1AQ9NRL2 1556 aaPredicted RBP42.65■■■■■ 4.42
GPC2-204ENST00000486702 HMGXB3Q12766 1538 aa42.52■■■■■ 4.4
GPC2-204ENST00000486702 MROH2BQ7Z745 1585 aa42.49■■■■■ 4.39
GPC2-204ENST00000486702 BAZ1BQ9UIG0 1483 aaKnown RBP42.48■■■■■ 4.39
GPC2-204ENST00000486702 ERCC6Q03468 1493 aa42.37■■■■■ 4.37
GPC2-204ENST00000486702 NESP48681 1621 aa42.31■■■■■ 4.36
GPC2-204ENST00000486702 PEG3Q9GZU2 1588 aa42.31■■■■■ 4.36
GPC2-204ENST00000486702 CUX2O14529 1486 aa42.03■■■■■ 4.32
GPC2-204ENST00000486702 WIZO95785 1651 aa42.01■■■■■ 4.32
GPC2-204ENST00000486702 DNAJC5Q9H3Z4 198 aa41.87■■■■■ 4.29
GPC2-204ENST00000486702 LAMC3Q9Y6N6 1575 aa41.84■■■■■ 4.29
GPC2-204ENST00000486702 RSF1Q96T23 1441 aaPredicted RBP41.7■■■■■ 4.27
GPC2-204ENST00000486702 CADPSQ9ULU8 1353 aa41.68■■■■■ 4.26
GPC2-204ENST00000486702 PDS5BQ9NTI5 1447 aa41.68■■■■■ 4.26
GPC2-204ENST00000486702 KIF21AQ7Z4S6 1674 aa41.66■■■■■ 4.26
GPC2-204ENST00000486702 THOC2Q8NI27 1593 aaKnown RBP41.63■■■■■ 4.26
GPC2-204ENST00000486702 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
GPC2-204ENST00000486702 MRC2Q9UBG0 1479 aa41.29■■■■■ 4.2
GPC2-204ENST00000486702 FANCD2Q9BXW9 1451 aa41.21■■■■■ 4.19
GPC2-204ENST00000486702 CFTRP13569 1480 aa41.21■■■■■ 4.19
GPC2-204ENST00000486702 CEP164Q9UPV0 1460 aa41.2■■■■■ 4.19
GPC2-204ENST00000486702 WDR62O43379 1518 aa41.12■■■■■ 4.17
GPC2-204ENST00000486702 CCDC88BA6NC98 1476 aa41.03■■■■■ 4.16
GPC2-204ENST00000486702 URB2Q14146 1524 aaKnown RBP40.87■■■■■ 4.13
GPC2-204ENST00000486702 PRDM2Q13029 1718 aa40.7■■■■■ 4.11
GPC2-204ENST00000486702 TOPBP1Q92547 1522 aa40.46■■■■■ 4.07
GPC2-204ENST00000486702 SUPT5HO00267 1087 aaKnown RBP40.38■■■■■ 4.05
GPC2-204ENST00000486702 ZNF608Q9ULD9 1512 aaPredicted RBP40.37■■■■■ 4.05
GPC2-204ENST00000486702 TRIM41Q8WV44 630 aa40.37■■■■■ 4.05
GPC2-204ENST00000486702 OSCARQ8IYS5 282 aa40.36■■■■■ 4.05
GPC2-204ENST00000486702 IFT140Q96RY7 1462 aa40.34■■■■■ 4.05
GPC2-204ENST00000486702 ABCC8Q09428 1581 aa40.28■■■■■ 4.04
GPC2-204ENST00000486702 DNMBPQ6XZF7 1577 aa40.27■■■■■ 4.04
GPC2-204ENST00000486702 AQRO60306 1485 aaKnown RBP eCLIP40.09■■■■■ 4.01
GPC2-204ENST00000486702 POLA1P09884 1462 aaPredicted RBP40.06■■■■■ 4
GPC2-204ENST00000486702 EIF4G3O43432 1585 aaKnown RBP40.05■■■■■ 4
GPC2-204ENST00000486702 RAD54L2Q9Y4B4 1467 aa40.03■■■■■ 4
GPC2-204ENST00000486702 TARBP1Q13395 1621 aaKnown RBP40.02■■■■■ 4
GPC2-204ENST00000486702 SOGA1O94964 1423 aa39.96■■■■□ 3.99
GPC2-204ENST00000486702 FBLN2P98095 1184 aa39.91■■■■□ 3.98
GPC2-204ENST00000486702 TDRD9Q8NDG6 1382 aaKnown RBP39.91■■■■□ 3.98
GPC2-204ENST00000486702 CUX1P39880 1505 aa39.89■■■■□ 3.98
GPC2-204ENST00000486702 FGD5Q6ZNL6 1462 aa39.88■■■■□ 3.98
GPC2-204ENST00000486702 CHD1O14646 1710 aa39.73■■■■□ 3.95
GPC2-204ENST00000486702 RIMBP3CA6NJZ7 1639 aa39.72■■■■□ 3.95
GPC2-204ENST00000486702 RIMBP3BA6NNM3 1639 aa39.72■■■■□ 3.95
GPC2-204ENST00000486702 RIMBP3Q9UFD9 1639 aa39.72■■■■□ 3.95
GPC2-204ENST00000486702 SNAPC4Q5SXM2 1469 aa39.61■■■■□ 3.93
GPC2-204ENST00000486702 ARHGEF11O15085 1522 aa39.6■■■■□ 3.93
GPC2-204ENST00000486702 CHMP7Q8WUX9 453 aaPredicted RBP39.55■■■■□ 3.92
GPC2-204ENST00000486702 CYB5RLQ6IPT4 315 aa39.52■■■■□ 3.92
GPC2-204ENST00000486702 GRIN2BQ13224 1484 aa39.49■■■■□ 3.91
GPC2-204ENST00000486702 WDR97A6NE52 1622 aa39.45■■■■□ 3.91
GPC2-204ENST00000486702 GAPVD1Q14C86 1478 aa39.43■■■■□ 3.9
GPC2-204ENST00000486702 MAGI1Q96QZ7 1491 aaPredicted RBP39.4■■■■□ 3.9
GPC2-204ENST00000486702 ABCA10Q8WWZ4 1543 aa39.36■■■■□ 3.89
GPC2-204ENST00000486702 WRNQ14191 1432 aaPredicted RBP eCLIP39.33■■■■□ 3.89
GPC2-204ENST00000486702 PBRM1Q86U86 1689 aa39.32■■■■□ 3.89
GPC2-204ENST00000486702 SYNJ2O15056 1496 aa39.3■■■■□ 3.88
GPC2-204ENST00000486702 SYNJ1O43426 1573 aa39.29■■■■□ 3.88
GPC2-204ENST00000486702 ARAP1Q96P48 1450 aa39.26■■■■□ 3.88
GPC2-204ENST00000486702 ABCA5Q8WWZ7 1642 aa39.25■■■■□ 3.87
GPC2-204ENST00000486702 TOP2BQ02880 1626 aa39.24■■■■□ 3.87
GPC2-204ENST00000486702 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
GPC2-204ENST00000486702 CLASP1Q7Z460 1538 aa39.21■■■■□ 3.87
GPC2-204ENST00000486702 TRHP20396 242 aaPredicted RBP39.03■■■■□ 3.84
GPC2-204ENST00000486702 GRIN2AQ12879 1464 aa38.98■■■■□ 3.83
GPC2-204ENST00000486702 ADAMTS12P58397 1594 aa38.95■■■■□ 3.83
GPC2-204ENST00000486702 FHAD1B1AJZ9 1412 aa38.9■■■■□ 3.82
GPC2-204ENST00000486702 CEP170Q5SW79 1584 aa38.85■■■■□ 3.81
GPC2-204ENST00000486702 ERICH3Q5RHP9 1530 aa38.84■■■■□ 3.81
GPC2-204ENST00000486702 NUP160Q12769 1436 aa38.8■■■■□ 3.8
GPC2-204ENST00000486702 ERCC6L2Q5T890 1561 aa38.79■■■■□ 3.8
GPC2-204ENST00000486702 JPH4Q96JJ6 628 aa38.58■■■■□ 3.77
GPC2-204ENST00000486702 IGF1RP08069 1367 aa38.57■■■■□ 3.76
GPC2-204ENST00000486702 SHROOM2Q13796 1616 aa38.55■■■■□ 3.76
GPC2-204ENST00000486702 KIF27Q86VH2 1401 aa38.55■■■■□ 3.76
GPC2-204ENST00000486702 PRG4Q92954 1404 aaPredicted RBP38.54■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms