RNA–Protein interactions for RNA: ENST00000486694.1

NECTIN4-202, Transcript of nectin cell adhesion molecule 4, humanhuman

TSL 3

Gene NECTIN4, Length 864 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-202ENST00000486694 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
NECTIN4-202ENST00000486694 ABCC9O60706 1549 aa33.24■■■□□ 2.91
NECTIN4-202ENST00000486694 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
NECTIN4-202ENST00000486694 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
NECTIN4-202ENST00000486694 NACADO15069 1562 aa31.3■■■□□ 2.6
NECTIN4-202ENST00000486694 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
NECTIN4-202ENST00000486694 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
NECTIN4-202ENST00000486694 PABPN1Q86U42 306 aaKnown RBP eCLIP30.94■■■□□ 2.54
NECTIN4-202ENST00000486694 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
NECTIN4-202ENST00000486694 UNC13AQ9UPW8 1703 aa30.71■■■□□ 2.51
NECTIN4-202ENST00000486694 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
NECTIN4-202ENST00000486694 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
NECTIN4-202ENST00000486694 DCAF1Q9Y4B6 1507 aa30.34■■■□□ 2.45
NECTIN4-202ENST00000486694 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
NECTIN4-202ENST00000486694 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
NECTIN4-202ENST00000486694 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
NECTIN4-202ENST00000486694 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
NECTIN4-202ENST00000486694 EIF4G1Q04637 1599 aaKnown RBP29.9■■■□□ 2.38
NECTIN4-202ENST00000486694 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
NECTIN4-202ENST00000486694 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
NECTIN4-202ENST00000486694 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
NECTIN4-202ENST00000486694 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
NECTIN4-202ENST00000486694 CUX2O14529 1486 aa28.73■■■□□ 2.19
NECTIN4-202ENST00000486694 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
NECTIN4-202ENST00000486694 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
NECTIN4-202ENST00000486694 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
NECTIN4-202ENST00000486694 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
NECTIN4-202ENST00000486694 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
NECTIN4-202ENST00000486694 NESP48681 1621 aa28.47■■■□□ 2.15
NECTIN4-202ENST00000486694 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
NECTIN4-202ENST00000486694 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
NECTIN4-202ENST00000486694 LAMC3Q9Y6N6 1575 aa28.27■■■□□ 2.12
NECTIN4-202ENST00000486694 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.11
NECTIN4-202ENST00000486694 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
NECTIN4-202ENST00000486694 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
NECTIN4-202ENST00000486694 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
NECTIN4-202ENST00000486694 WIZO95785 1651 aa27.94■■■□□ 2.06
NECTIN4-202ENST00000486694 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
NECTIN4-202ENST00000486694 WDR62O43379 1518 aa27.82■■■□□ 2.04
NECTIN4-202ENST00000486694 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
NECTIN4-202ENST00000486694 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
NECTIN4-202ENST00000486694 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
NECTIN4-202ENST00000486694 CFTRP13569 1480 aa27.66■■■□□ 2.02
NECTIN4-202ENST00000486694 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
NECTIN4-202ENST00000486694 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
NECTIN4-202ENST00000486694 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
NECTIN4-202ENST00000486694 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
NECTIN4-202ENST00000486694 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
NECTIN4-202ENST00000486694 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
NECTIN4-202ENST00000486694 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
NECTIN4-202ENST00000486694 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
NECTIN4-202ENST00000486694 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
NECTIN4-202ENST00000486694 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
NECTIN4-202ENST00000486694 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
NECTIN4-202ENST00000486694 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.91
NECTIN4-202ENST00000486694 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.91
NECTIN4-202ENST00000486694 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.91
NECTIN4-202ENST00000486694 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
NECTIN4-202ENST00000486694 ARHGEF11O15085 1522 aa26.94■■□□□ 1.9
NECTIN4-202ENST00000486694 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
NECTIN4-202ENST00000486694 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
NECTIN4-202ENST00000486694 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
NECTIN4-202ENST00000486694 FBLN2P98095 1184 aa26.83■■□□□ 1.89
NECTIN4-202ENST00000486694 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
NECTIN4-202ENST00000486694 CHD1O14646 1710 aa26.78■■□□□ 1.88
NECTIN4-202ENST00000486694 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
NECTIN4-202ENST00000486694 SOGA1O94964 1423 aa26.77■■□□□ 1.88
NECTIN4-202ENST00000486694 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
NECTIN4-202ENST00000486694 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
NECTIN4-202ENST00000486694 ARAP1Q96P48 1450 aa26.66■■□□□ 1.86
NECTIN4-202ENST00000486694 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
NECTIN4-202ENST00000486694 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
NECTIN4-202ENST00000486694 CUX1P39880 1505 aa26.61■■□□□ 1.85
NECTIN4-202ENST00000486694 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
NECTIN4-202ENST00000486694 TRHP20396 242 aaPredicted RBP26.58■■□□□ 1.85
NECTIN4-202ENST00000486694 MAGI1Q96QZ7 1491 aaPredicted RBP26.57■■□□□ 1.84
NECTIN4-202ENST00000486694 GRIN2BQ13224 1484 aa26.56■■□□□ 1.84
NECTIN4-202ENST00000486694 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
NECTIN4-202ENST00000486694 CLASP1Q7Z460 1538 aa26.51■■□□□ 1.83
NECTIN4-202ENST00000486694 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
NECTIN4-202ENST00000486694 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
NECTIN4-202ENST00000486694 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
NECTIN4-202ENST00000486694 PBRM1Q86U86 1689 aa26.38■■□□□ 1.81
NECTIN4-202ENST00000486694 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
NECTIN4-202ENST00000486694 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
NECTIN4-202ENST00000486694 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
NECTIN4-202ENST00000486694 GRIN2AQ12879 1464 aa26.2■■□□□ 1.78
NECTIN4-202ENST00000486694 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
NECTIN4-202ENST00000486694 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
NECTIN4-202ENST00000486694 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
NECTIN4-202ENST00000486694 NUP160Q12769 1436 aa26.12■■□□□ 1.77
NECTIN4-202ENST00000486694 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
NECTIN4-202ENST00000486694 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
NECTIN4-202ENST00000486694 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
NECTIN4-202ENST00000486694 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
NECTIN4-202ENST00000486694 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
NECTIN4-202ENST00000486694 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
NECTIN4-202ENST00000486694 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
NECTIN4-202ENST00000486694 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
NECTIN4-202ENST00000486694 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms