RNA–Protein interactions for RNA: ENST00000486649.1

AFDN-214, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 2

Gene AFDN, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-214ENST00000486649 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
AFDN-214ENST00000486649 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
AFDN-214ENST00000486649 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
AFDN-214ENST00000486649 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
AFDN-214ENST00000486649 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
AFDN-214ENST00000486649 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
AFDN-214ENST00000486649 NACADO15069 1562 aa16.89■□□□□ 0.29
AFDN-214ENST00000486649 ABCC9O60706 1549 aa16.86■□□□□ 0.29
AFDN-214ENST00000486649 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
AFDN-214ENST00000486649 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
AFDN-214ENST00000486649 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
AFDN-214ENST00000486649 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
AFDN-214ENST00000486649 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
AFDN-214ENST00000486649 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
AFDN-214ENST00000486649 BICRAQ9NZM4 1560 aa16.12■□□□□ 0.17
AFDN-214ENST00000486649 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
AFDN-214ENST00000486649 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
AFDN-214ENST00000486649 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
AFDN-214ENST00000486649 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
AFDN-214ENST00000486649 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
AFDN-214ENST00000486649 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
AFDN-214ENST00000486649 WIZO95785 1651 aa15.86■□□□□ 0.13
AFDN-214ENST00000486649 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
AFDN-214ENST00000486649 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
AFDN-214ENST00000486649 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
AFDN-214ENST00000486649 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
AFDN-214ENST00000486649 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
AFDN-214ENST00000486649 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
AFDN-214ENST00000486649 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
AFDN-214ENST00000486649 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
AFDN-214ENST00000486649 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
AFDN-214ENST00000486649 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
AFDN-214ENST00000486649 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
AFDN-214ENST00000486649 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
AFDN-214ENST00000486649 CFTRP13569 1480 aa15.26■□□□□ 0.03
AFDN-214ENST00000486649 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
AFDN-214ENST00000486649 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
AFDN-214ENST00000486649 EEA1Q15075 1411 aa15.2■□□□□ 0.02
AFDN-214ENST00000486649 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
AFDN-214ENST00000486649 PRDM2Q13029 1718 aa15.13■□□□□ 0.01
AFDN-214ENST00000486649 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
AFDN-214ENST00000486649 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
AFDN-214ENST00000486649 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
AFDN-214ENST00000486649 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0
AFDN-214ENST00000486649 SOGA1O94964 1423 aa15.01□□□□□ -0.01
AFDN-214ENST00000486649 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
AFDN-214ENST00000486649 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
AFDN-214ENST00000486649 CUX1P39880 1505 aa14.99□□□□□ -0.01
AFDN-214ENST00000486649 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
AFDN-214ENST00000486649 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
AFDN-214ENST00000486649 KIF21BO75037 1637 aa14.92□□□□□ -0.02
AFDN-214ENST00000486649 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
AFDN-214ENST00000486649 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
AFDN-214ENST00000486649 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
AFDN-214ENST00000486649 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
AFDN-214ENST00000486649 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
AFDN-214ENST00000486649 DNMBPQ6XZF7 1577 aa14.86□□□□□ -0.03
AFDN-214ENST00000486649 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
AFDN-214ENST00000486649 NESP48681 1621 aa14.84□□□□□ -0.03
AFDN-214ENST00000486649 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
AFDN-214ENST00000486649 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
AFDN-214ENST00000486649 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
AFDN-214ENST00000486649 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
AFDN-214ENST00000486649 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
AFDN-214ENST00000486649 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
AFDN-214ENST00000486649 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
AFDN-214ENST00000486649 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
AFDN-214ENST00000486649 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
AFDN-214ENST00000486649 CUX2O14529 1486 aa14.73□□□□□ -0.05
AFDN-214ENST00000486649 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
AFDN-214ENST00000486649 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
AFDN-214ENST00000486649 IGF1RP08069 1367 aa14.71□□□□□ -0.06
AFDN-214ENST00000486649 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
AFDN-214ENST00000486649 MRC2Q9UBG0 1479 aa14.66□□□□□ -0.06
AFDN-214ENST00000486649 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
AFDN-214ENST00000486649 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
AFDN-214ENST00000486649 WDR97A6NE52 1622 aa14.65□□□□□ -0.06
AFDN-214ENST00000486649 CLIP1P30622 1438 aa14.64□□□□□ -0.07
AFDN-214ENST00000486649 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
AFDN-214ENST00000486649 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
AFDN-214ENST00000486649 CUL7Q14999 1698 aa14.6□□□□□ -0.07
AFDN-214ENST00000486649 WDR62O43379 1518 aa14.6□□□□□ -0.07
AFDN-214ENST00000486649 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
AFDN-214ENST00000486649 TARBP1Q13395 1621 aaKnown RBP14.58□□□□□ -0.08
AFDN-214ENST00000486649 VPS8Q8N3P4 1428 aa14.56□□□□□ -0.08
AFDN-214ENST00000486649 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
AFDN-214ENST00000486649 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
AFDN-214ENST00000486649 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
AFDN-214ENST00000486649 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
AFDN-214ENST00000486649 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
AFDN-214ENST00000486649 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
AFDN-214ENST00000486649 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
AFDN-214ENST00000486649 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
AFDN-214ENST00000486649 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
AFDN-214ENST00000486649 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
AFDN-214ENST00000486649 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
AFDN-214ENST00000486649 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
AFDN-214ENST00000486649 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
AFDN-214ENST00000486649 MAP3K1Q13233 1512 aa14.38□□□□□ -0.11
AFDN-214ENST00000486649 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms