RNA–Protein interactions for RNA: ENST00000486587.1

LRSAM1-208, Transcript of leucine rich repeat and sterile alpha motif containing 1, humanhuman

TSL 3

Gene LRSAM1, Length 827 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1-208ENST00000486587 NISCHQ9Y2I1 1504 aa44.6■■■■■ 4.73
LRSAM1-208ENST00000486587 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
LRSAM1-208ENST00000486587 ABCC9O60706 1549 aa39.66■■■■□ 3.94
LRSAM1-208ENST00000486587 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
LRSAM1-208ENST00000486587 NACADO15069 1562 aa37.6■■■■□ 3.61
LRSAM1-208ENST00000486587 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
LRSAM1-208ENST00000486587 UNC13AQ9UPW8 1703 aa37.16■■■■□ 3.54
LRSAM1-208ENST00000486587 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
LRSAM1-208ENST00000486587 ZCCHC6Q5VYS8 1495 aaKnown RBP37.08■■■■□ 3.53
LRSAM1-208ENST00000486587 PABPN1Q86U42 306 aaKnown RBP eCLIP36.91■■■■□ 3.5
LRSAM1-208ENST00000486587 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
LRSAM1-208ENST00000486587 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
LRSAM1-208ENST00000486587 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
LRSAM1-208ENST00000486587 SCRIBQ14160 1630 aa36.53■■■■□ 3.44
LRSAM1-208ENST00000486587 SHROOM4Q9ULL8 1493 aa36.17■■■■□ 3.38
LRSAM1-208ENST00000486587 CC2D2AQ9P2K1 1620 aa35.85■■■■□ 3.33
LRSAM1-208ENST00000486587 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
LRSAM1-208ENST00000486587 CECR2Q9BXF3 1484 aa35.64■■■■□ 3.3
LRSAM1-208ENST00000486587 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
LRSAM1-208ENST00000486587 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
LRSAM1-208ENST00000486587 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
LRSAM1-208ENST00000486587 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
LRSAM1-208ENST00000486587 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
LRSAM1-208ENST00000486587 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
LRSAM1-208ENST00000486587 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
LRSAM1-208ENST00000486587 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
LRSAM1-208ENST00000486587 PEG3Q9GZU2 1588 aa34.37■■■■□ 3.09
LRSAM1-208ENST00000486587 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
LRSAM1-208ENST00000486587 NESP48681 1621 aa34.19■■■■□ 3.06
LRSAM1-208ENST00000486587 WIZO95785 1651 aa34.09■■■■□ 3.05
LRSAM1-208ENST00000486587 CUX2O14529 1486 aa33.95■■■■□ 3.03
LRSAM1-208ENST00000486587 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
LRSAM1-208ENST00000486587 KIF21AQ7Z4S6 1674 aa33.84■■■■□ 3.01
LRSAM1-208ENST00000486587 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
LRSAM1-208ENST00000486587 RSF1Q96T23 1441 aaPredicted RBP33.76■■■□□ 2.99
LRSAM1-208ENST00000486587 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
LRSAM1-208ENST00000486587 PDS5BQ9NTI5 1447 aa33.62■■■□□ 2.97
LRSAM1-208ENST00000486587 CADPSQ9ULU8 1353 aa33.62■■■□□ 2.97
LRSAM1-208ENST00000486587 DNAJC5Q9H3Z4 198 aa33.47■■■□□ 2.95
LRSAM1-208ENST00000486587 MRC2Q9UBG0 1479 aa33.42■■■□□ 2.94
LRSAM1-208ENST00000486587 CEP164Q9UPV0 1460 aa33.36■■■□□ 2.93
LRSAM1-208ENST00000486587 WDR62O43379 1518 aa33.34■■■□□ 2.93
LRSAM1-208ENST00000486587 CFTRP13569 1480 aa33.34■■■□□ 2.93
LRSAM1-208ENST00000486587 FANCD2Q9BXW9 1451 aa33.33■■■□□ 2.93
LRSAM1-208ENST00000486587 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
LRSAM1-208ENST00000486587 CCDC88BA6NC98 1476 aa33.19■■■□□ 2.9
LRSAM1-208ENST00000486587 URB2Q14146 1524 aaKnown RBP33.08■■■□□ 2.89
LRSAM1-208ENST00000486587 TOPBP1Q92547 1522 aa32.76■■■□□ 2.83
LRSAM1-208ENST00000486587 DNMBPQ6XZF7 1577 aa32.68■■■□□ 2.82
LRSAM1-208ENST00000486587 ZNF608Q9ULD9 1512 aaPredicted RBP32.63■■■□□ 2.81
LRSAM1-208ENST00000486587 IFT140Q96RY7 1462 aa32.62■■■□□ 2.81
LRSAM1-208ENST00000486587 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
LRSAM1-208ENST00000486587 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
LRSAM1-208ENST00000486587 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
LRSAM1-208ENST00000486587 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
LRSAM1-208ENST00000486587 POLA1P09884 1462 aaPredicted RBP32.45■■■□□ 2.79
LRSAM1-208ENST00000486587 CUX1P39880 1505 aa32.35■■■□□ 2.77
LRSAM1-208ENST00000486587 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
LRSAM1-208ENST00000486587 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
LRSAM1-208ENST00000486587 AQRO60306 1485 aaKnown RBP eCLIP32.33■■■□□ 2.77
LRSAM1-208ENST00000486587 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
LRSAM1-208ENST00000486587 TRIM41Q8WV44 630 aa32.3■■■□□ 2.76
LRSAM1-208ENST00000486587 CHD1O14646 1710 aa32.27■■■□□ 2.76
LRSAM1-208ENST00000486587 SOGA1O94964 1423 aa32.22■■■□□ 2.75
LRSAM1-208ENST00000486587 TDRD9Q8NDG6 1382 aaKnown RBP32.16■■■□□ 2.74
LRSAM1-208ENST00000486587 WDR97A6NE52 1622 aa32.15■■■□□ 2.74
LRSAM1-208ENST00000486587 RIMBP3CA6NJZ7 1639 aa32.13■■■□□ 2.73
LRSAM1-208ENST00000486587 RIMBP3BA6NNM3 1639 aa32.13■■■□□ 2.73
LRSAM1-208ENST00000486587 RIMBP3Q9UFD9 1639 aa32.13■■■□□ 2.73
LRSAM1-208ENST00000486587 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
LRSAM1-208ENST00000486587 FBLN2P98095 1184 aa32.02■■■□□ 2.72
LRSAM1-208ENST00000486587 ARHGEF11O15085 1522 aa32.01■■■□□ 2.72
LRSAM1-208ENST00000486587 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
LRSAM1-208ENST00000486587 GRIN2BQ13224 1484 aa31.94■■■□□ 2.7
LRSAM1-208ENST00000486587 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
LRSAM1-208ENST00000486587 ABCA5Q8WWZ7 1642 aa31.93■■■□□ 2.7
LRSAM1-208ENST00000486587 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
LRSAM1-208ENST00000486587 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
LRSAM1-208ENST00000486587 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
LRSAM1-208ENST00000486587 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
LRSAM1-208ENST00000486587 GAPVD1Q14C86 1478 aa31.88■■■□□ 2.69
LRSAM1-208ENST00000486587 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
LRSAM1-208ENST00000486587 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
LRSAM1-208ENST00000486587 SYNJ2O15056 1496 aa31.8■■■□□ 2.68
LRSAM1-208ENST00000486587 CHMP7Q8WUX9 453 aaPredicted RBP31.76■■■□□ 2.67
LRSAM1-208ENST00000486587 ARAP1Q96P48 1450 aa31.74■■■□□ 2.67
LRSAM1-208ENST00000486587 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
LRSAM1-208ENST00000486587 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
LRSAM1-208ENST00000486587 GRIN2AQ12879 1464 aa31.57■■■□□ 2.64
LRSAM1-208ENST00000486587 CEP170Q5SW79 1584 aa31.51■■■□□ 2.64
LRSAM1-208ENST00000486587 ERICH3Q5RHP9 1530 aa31.5■■■□□ 2.63
LRSAM1-208ENST00000486587 FHAD1B1AJZ9 1412 aa31.45■■■□□ 2.63
LRSAM1-208ENST00000486587 NUP160Q12769 1436 aa31.41■■■□□ 2.62
LRSAM1-208ENST00000486587 ERCC6L2Q5T890 1561 aa31.4■■■□□ 2.62
LRSAM1-208ENST00000486587 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
LRSAM1-208ENST00000486587 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
LRSAM1-208ENST00000486587 TRHP20396 242 aaPredicted RBP31.21■■■□□ 2.59
LRSAM1-208ENST00000486587 KIF27Q86VH2 1401 aa31.19■■■□□ 2.58
LRSAM1-208ENST00000486587 CUL7Q14999 1698 aa31.18■■■□□ 2.58
LRSAM1-208ENST00000486587 IGF1RP08069 1367 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms