RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
GSDMB-210ENST00000486560 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
GSDMB-210ENST00000486560 ABCC9O60706 1549 aa25.35■■□□□ 1.65
GSDMB-210ENST00000486560 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
GSDMB-210ENST00000486560 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
GSDMB-210ENST00000486560 NACADO15069 1562 aa24.2■■□□□ 1.47
GSDMB-210ENST00000486560 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
GSDMB-210ENST00000486560 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
GSDMB-210ENST00000486560 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
GSDMB-210ENST00000486560 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
GSDMB-210ENST00000486560 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
GSDMB-210ENST00000486560 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.383e-15■■■□□ 16.8
GSDMB-210ENST00000486560 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
GSDMB-210ENST00000486560 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
GSDMB-210ENST00000486560 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
GSDMB-210ENST00000486560 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
GSDMB-210ENST00000486560 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
GSDMB-210ENST00000486560 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
GSDMB-210ENST00000486560 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
GSDMB-210ENST00000486560 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
GSDMB-210ENST00000486560 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
GSDMB-210ENST00000486560 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
GSDMB-210ENST00000486560 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
GSDMB-210ENST00000486560 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
GSDMB-210ENST00000486560 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
GSDMB-210ENST00000486560 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
GSDMB-210ENST00000486560 WIZO95785 1651 aa22.2■■□□□ 1.14
GSDMB-210ENST00000486560 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
GSDMB-210ENST00000486560 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
GSDMB-210ENST00000486560 NESP48681 1621 aa21.9■■□□□ 1.1
GSDMB-210ENST00000486560 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
GSDMB-210ENST00000486560 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
GSDMB-210ENST00000486560 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
GSDMB-210ENST00000486560 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
GSDMB-210ENST00000486560 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
GSDMB-210ENST00000486560 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
GSDMB-210ENST00000486560 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
GSDMB-210ENST00000486560 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
GSDMB-210ENST00000486560 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
GSDMB-210ENST00000486560 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
GSDMB-210ENST00000486560 CUX2O14529 1486 aa21.52■■□□□ 1.03
GSDMB-210ENST00000486560 CFTRP13569 1480 aa21.5■■□□□ 1.03
GSDMB-210ENST00000486560 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
GSDMB-210ENST00000486560 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
GSDMB-210ENST00000486560 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
GSDMB-210ENST00000486560 WDR62O43379 1518 aa21.33■■□□□ 1
GSDMB-210ENST00000486560 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
GSDMB-210ENST00000486560 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
GSDMB-210ENST00000486560 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
GSDMB-210ENST00000486560 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
GSDMB-210ENST00000486560 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
GSDMB-210ENST00000486560 CUX1P39880 1505 aa20.96■□□□□ 0.95
GSDMB-210ENST00000486560 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
GSDMB-210ENST00000486560 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
GSDMB-210ENST00000486560 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
GSDMB-210ENST00000486560 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
GSDMB-210ENST00000486560 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
GSDMB-210ENST00000486560 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
GSDMB-210ENST00000486560 SOGA1O94964 1423 aa20.87■□□□□ 0.93
GSDMB-210ENST00000486560 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
GSDMB-210ENST00000486560 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
GSDMB-210ENST00000486560 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
GSDMB-210ENST00000486560 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
GSDMB-210ENST00000486560 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
GSDMB-210ENST00000486560 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
GSDMB-210ENST00000486560 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
GSDMB-210ENST00000486560 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
GSDMB-210ENST00000486560 CHD1O14646 1710 aa20.75■□□□□ 0.91
GSDMB-210ENST00000486560 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
GSDMB-210ENST00000486560 FBLN2P98095 1184 aa20.71■□□□□ 0.91
GSDMB-210ENST00000486560 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
GSDMB-210ENST00000486560 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
GSDMB-210ENST00000486560 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
GSDMB-210ENST00000486560 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
GSDMB-210ENST00000486560 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
GSDMB-210ENST00000486560 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
GSDMB-210ENST00000486560 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
GSDMB-210ENST00000486560 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
GSDMB-210ENST00000486560 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
GSDMB-210ENST00000486560 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
GSDMB-210ENST00000486560 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
GSDMB-210ENST00000486560 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
GSDMB-210ENST00000486560 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
GSDMB-210ENST00000486560 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
GSDMB-210ENST00000486560 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
GSDMB-210ENST00000486560 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
GSDMB-210ENST00000486560 CUL7Q14999 1698 aa20.32■□□□□ 0.84
GSDMB-210ENST00000486560 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
GSDMB-210ENST00000486560 IGF1RP08069 1367 aa20.22■□□□□ 0.83
GSDMB-210ENST00000486560 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
GSDMB-210ENST00000486560 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
GSDMB-210ENST00000486560 NUP160Q12769 1436 aa20.19■□□□□ 0.82
GSDMB-210ENST00000486560 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
GSDMB-210ENST00000486560 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
GSDMB-210ENST00000486560 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
GSDMB-210ENST00000486560 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms