RNA–Protein interactions for RNA: ENST00000486457.5

GRAMD1C-212, Transcript of GRAM domain containing 1C, humanhuman

TSL 5

Gene GRAMD1C, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1C-212ENST00000486457 NISCHQ9Y2I1 1504 aa45.53■■■■■ 4.88
GRAMD1C-212ENST00000486457 ABCC9O60706 1549 aa41.95■■■■■ 4.31
GRAMD1C-212ENST00000486457 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
GRAMD1C-212ENST00000486457 DNAJC5BQ9UF47 199 aa40.19■■■■■ 4.02
GRAMD1C-212ENST00000486457 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
GRAMD1C-212ENST00000486457 NACADO15069 1562 aa39.05■■■■□ 3.84
GRAMD1C-212ENST00000486457 PABPN1Q86U42 306 aaKnown RBP eCLIP38.92■■■■□ 3.82
GRAMD1C-212ENST00000486457 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
GRAMD1C-212ENST00000486457 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
GRAMD1C-212ENST00000486457 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
GRAMD1C-212ENST00000486457 MYO15BQ96JP2 1530 aa38.3■■■■□ 3.72
GRAMD1C-212ENST00000486457 CC2D2AQ9P2K1 1620 aa37.87■■■■□ 3.65
GRAMD1C-212ENST00000486457 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
GRAMD1C-212ENST00000486457 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
GRAMD1C-212ENST00000486457 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
GRAMD1C-212ENST00000486457 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
GRAMD1C-212ENST00000486457 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
GRAMD1C-212ENST00000486457 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
GRAMD1C-212ENST00000486457 DNAJC5Q9H3Z4 198 aa37.3■■■■□ 3.56
GRAMD1C-212ENST00000486457 CUX2O14529 1486 aa36.41■■■■□ 3.42
GRAMD1C-212ENST00000486457 ERCC6Q03468 1493 aa36.15■■■■□ 3.38
GRAMD1C-212ENST00000486457 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
GRAMD1C-212ENST00000486457 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
GRAMD1C-212ENST00000486457 NESP48681 1621 aa35.89■■■■□ 3.34
GRAMD1C-212ENST00000486457 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
GRAMD1C-212ENST00000486457 SMARCA4P51532 1647 aa35.69■■■■□ 3.3
GRAMD1C-212ENST00000486457 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
GRAMD1C-212ENST00000486457 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
GRAMD1C-212ENST00000486457 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
GRAMD1C-212ENST00000486457 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
GRAMD1C-212ENST00000486457 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
GRAMD1C-212ENST00000486457 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
GRAMD1C-212ENST00000486457 BAZ1AQ9NRL2 1556 aaPredicted RBP35.32■■■■□ 3.24
GRAMD1C-212ENST00000486457 TRIM41Q8WV44 630 aa35.27■■■■□ 3.24
GRAMD1C-212ENST00000486457 PDS5BQ9NTI5 1447 aa35.14■■■■□ 3.22
GRAMD1C-212ENST00000486457 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
GRAMD1C-212ENST00000486457 MRC2Q9UBG0 1479 aa34.97■■■■□ 3.19
GRAMD1C-212ENST00000486457 WDR62O43379 1518 aa34.96■■■■□ 3.19
GRAMD1C-212ENST00000486457 CADPSQ9ULU8 1353 aa34.95■■■■□ 3.19
GRAMD1C-212ENST00000486457 WIZO95785 1651 aa34.66■■■■□ 3.14
GRAMD1C-212ENST00000486457 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
GRAMD1C-212ENST00000486457 FANCD2Q9BXW9 1451 aa34.57■■■■□ 3.12
GRAMD1C-212ENST00000486457 OSCARQ8IYS5 282 aa34.53■■■■□ 3.12
GRAMD1C-212ENST00000486457 CFTRP13569 1480 aa34.44■■■■□ 3.1
GRAMD1C-212ENST00000486457 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
GRAMD1C-212ENST00000486457 RIMBP3CA6NJZ7 1639 aa34.33■■■■□ 3.09
GRAMD1C-212ENST00000486457 RIMBP3BA6NNM3 1639 aa34.33■■■■□ 3.09
GRAMD1C-212ENST00000486457 RIMBP3Q9UFD9 1639 aa34.33■■■■□ 3.09
GRAMD1C-212ENST00000486457 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
GRAMD1C-212ENST00000486457 ARHGEF11O15085 1522 aa34.13■■■■□ 3.05
GRAMD1C-212ENST00000486457 TOP2AP11388 1531 aaKnown RBP34.11■■■■□ 3.05
GRAMD1C-212ENST00000486457 RSF1Q96T23 1441 aaPredicted RBP34.09■■■■□ 3.05
GRAMD1C-212ENST00000486457 PRDM2Q13029 1718 aa33.99■■■■□ 3.03
GRAMD1C-212ENST00000486457 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
GRAMD1C-212ENST00000486457 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
GRAMD1C-212ENST00000486457 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
GRAMD1C-212ENST00000486457 CYB5RLQ6IPT4 315 aa33.83■■■■□ 3.01
GRAMD1C-212ENST00000486457 ARAP1Q96P48 1450 aa33.8■■■■□ 3
GRAMD1C-212ENST00000486457 CCDC88BA6NC98 1476 aa33.76■■■□□ 2.99
GRAMD1C-212ENST00000486457 CHD1O14646 1710 aa33.75■■■□□ 2.99
GRAMD1C-212ENST00000486457 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
GRAMD1C-212ENST00000486457 TARBP1Q13395 1621 aaKnown RBP33.67■■■□□ 2.98
GRAMD1C-212ENST00000486457 DNMBPQ6XZF7 1577 aa33.64■■■□□ 2.98
GRAMD1C-212ENST00000486457 TRHP20396 242 aaPredicted RBP33.61■■■□□ 2.97
GRAMD1C-212ENST00000486457 ABCC8Q09428 1581 aa33.57■■■□□ 2.96
GRAMD1C-212ENST00000486457 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
GRAMD1C-212ENST00000486457 FBLN2P98095 1184 aa33.43■■■□□ 2.94
GRAMD1C-212ENST00000486457 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
GRAMD1C-212ENST00000486457 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
GRAMD1C-212ENST00000486457 TDRD9Q8NDG6 1382 aaKnown RBP33.32■■■□□ 2.92
GRAMD1C-212ENST00000486457 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
GRAMD1C-212ENST00000486457 SOGA1O94964 1423 aa33.23■■■□□ 2.91
GRAMD1C-212ENST00000486457 SYNJ1O43426 1573 aa33.15■■■□□ 2.9
GRAMD1C-212ENST00000486457 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
GRAMD1C-212ENST00000486457 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
GRAMD1C-212ENST00000486457 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
GRAMD1C-212ENST00000486457 AEBP2Q6ZN18 517 aaPredicted RBP33.11■■■□□ 2.89
GRAMD1C-212ENST00000486457 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
GRAMD1C-212ENST00000486457 CUX1P39880 1505 aa33.05■■■□□ 2.88
GRAMD1C-212ENST00000486457 SYNJ2O15056 1496 aa33.03■■■□□ 2.88
GRAMD1C-212ENST00000486457 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
GRAMD1C-212ENST00000486457 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
GRAMD1C-212ENST00000486457 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
GRAMD1C-212ENST00000486457 ERCC6L2Q5T890 1561 aa32.88■■■□□ 2.85
GRAMD1C-212ENST00000486457 ABCA5Q8WWZ7 1642 aa32.78■■■□□ 2.84
GRAMD1C-212ENST00000486457 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
GRAMD1C-212ENST00000486457 GRIN2AQ12879 1464 aa32.65■■■□□ 2.82
GRAMD1C-212ENST00000486457 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
GRAMD1C-212ENST00000486457 NUP160Q12769 1436 aa32.61■■■□□ 2.81
GRAMD1C-212ENST00000486457 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
GRAMD1C-212ENST00000486457 KIF13AQ9H1H9 1805 aa32.57■■■□□ 2.8
GRAMD1C-212ENST00000486457 SHROOM2Q13796 1616 aa32.57■■■□□ 2.8
GRAMD1C-212ENST00000486457 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
GRAMD1C-212ENST00000486457 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
GRAMD1C-212ENST00000486457 PRG4Q92954 1404 aaPredicted RBP32.29■■■□□ 2.76
GRAMD1C-212ENST00000486457 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.76
GRAMD1C-212ENST00000486457 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
GRAMD1C-212ENST00000486457 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
GRAMD1C-212ENST00000486457 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
GRAMD1C-212ENST00000486457 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms