RNA–Protein interactions for RNA: ENST00000486400.1

MMP23B-206, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 2

Gene MMP23B, Length 485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-206ENST00000486400 NISCHQ9Y2I1 1504 aa43.47■■■■■ 4.55
MMP23B-206ENST00000486400 ABCC9O60706 1549 aa39.21■■■■□ 3.87
MMP23B-206ENST00000486400 CCDC180Q9P1Z9 1646 aa39.14■■■■□ 3.86
MMP23B-206ENST00000486400 RB1CC1Q8TDY2 1594 aa37.31■■■■□ 3.56
MMP23B-206ENST00000486400 NACADO15069 1562 aa37.01■■■■□ 3.52
MMP23B-206ENST00000486400 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
MMP23B-206ENST00000486400 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
MMP23B-206ENST00000486400 UNC13AQ9UPW8 1703 aa36.55■■■■□ 3.44
MMP23B-206ENST00000486400 PABPN1Q86U42 306 aaKnown RBP eCLIP36.46■■■■□ 3.43
MMP23B-206ENST00000486400 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
MMP23B-206ENST00000486400 BICRAQ9NZM4 1560 aa36.2■■■■□ 3.39
MMP23B-206ENST00000486400 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
MMP23B-206ENST00000486400 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
MMP23B-206ENST00000486400 SHROOM4Q9ULL8 1493 aa35.71■■■■□ 3.31
MMP23B-206ENST00000486400 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
MMP23B-206ENST00000486400 CC2D2AQ9P2K1 1620 aa35.46■■■■□ 3.27
MMP23B-206ENST00000486400 CECR2Q9BXF3 1484 aa35.35■■■■□ 3.25
MMP23B-206ENST00000486400 EIF4G1Q04637 1599 aaKnown RBP35.34■■■■□ 3.25
MMP23B-206ENST00000486400 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
MMP23B-206ENST00000486400 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
MMP23B-206ENST00000486400 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.03
MMP23B-206ENST00000486400 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
MMP23B-206ENST00000486400 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
MMP23B-206ENST00000486400 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
MMP23B-206ENST00000486400 CUX2O14529 1486 aa33.88■■■■□ 3.01
MMP23B-206ENST00000486400 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
MMP23B-206ENST00000486400 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
MMP23B-206ENST00000486400 BAZ1BQ9UIG0 1483 aaKnown RBP33.68■■■□□ 2.98
MMP23B-206ENST00000486400 NESP48681 1621 aa33.64■■■□□ 2.98
MMP23B-206ENST00000486400 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
MMP23B-206ENST00000486400 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
MMP23B-206ENST00000486400 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
MMP23B-206ENST00000486400 THOC2Q8NI27 1593 aaKnown RBP33.38■■■□□ 2.93
MMP23B-206ENST00000486400 KIF21AQ7Z4S6 1674 aa33.29■■■□□ 2.92
MMP23B-206ENST00000486400 PDS5BQ9NTI5 1447 aa33.21■■■□□ 2.91
MMP23B-206ENST00000486400 WIZO95785 1651 aa33.12■■■□□ 2.89
MMP23B-206ENST00000486400 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
MMP23B-206ENST00000486400 MRC2Q9UBG0 1479 aa32.93■■■□□ 2.86
MMP23B-206ENST00000486400 WDR62O43379 1518 aa32.87■■■□□ 2.85
MMP23B-206ENST00000486400 CEP164Q9UPV0 1460 aa32.78■■■□□ 2.84
MMP23B-206ENST00000486400 FANCD2Q9BXW9 1451 aa32.72■■■□□ 2.83
MMP23B-206ENST00000486400 RSF1Q96T23 1441 aaPredicted RBP32.71■■■□□ 2.83
MMP23B-206ENST00000486400 CFTRP13569 1480 aa32.67■■■□□ 2.82
MMP23B-206ENST00000486400 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
MMP23B-206ENST00000486400 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
MMP23B-206ENST00000486400 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
MMP23B-206ENST00000486400 URB2Q14146 1524 aaKnown RBP32.46■■■□□ 2.79
MMP23B-206ENST00000486400 OSCARQ8IYS5 282 aa32.3■■■□□ 2.76
MMP23B-206ENST00000486400 CCDC88BA6NC98 1476 aa32.28■■■□□ 2.76
MMP23B-206ENST00000486400 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
MMP23B-206ENST00000486400 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
MMP23B-206ENST00000486400 ZNF608Q9ULD9 1512 aaPredicted RBP32.07■■■□□ 2.72
MMP23B-206ENST00000486400 ABCC8Q09428 1581 aa32.03■■■□□ 2.72
MMP23B-206ENST00000486400 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
MMP23B-206ENST00000486400 RIMBP3CA6NJZ7 1639 aa31.94■■■□□ 2.7
MMP23B-206ENST00000486400 RIMBP3BA6NNM3 1639 aa31.94■■■□□ 2.7
MMP23B-206ENST00000486400 RIMBP3Q9UFD9 1639 aa31.94■■■□□ 2.7
MMP23B-206ENST00000486400 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
MMP23B-206ENST00000486400 TARBP1Q13395 1621 aaKnown RBP31.84■■■□□ 2.69
MMP23B-206ENST00000486400 ARHGEF11O15085 1522 aa31.8■■■□□ 2.68
MMP23B-206ENST00000486400 CHD1O14646 1710 aa31.78■■■□□ 2.68
MMP23B-206ENST00000486400 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.67
MMP23B-206ENST00000486400 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
MMP23B-206ENST00000486400 RAD54L2Q9Y4B4 1467 aa31.62■■■□□ 2.65
MMP23B-206ENST00000486400 SOGA1O94964 1423 aa31.59■■■□□ 2.65
MMP23B-206ENST00000486400 FBLN2P98095 1184 aa31.58■■■□□ 2.65
MMP23B-206ENST00000486400 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
MMP23B-206ENST00000486400 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
MMP23B-206ENST00000486400 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
MMP23B-206ENST00000486400 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
MMP23B-206ENST00000486400 CUX1P39880 1505 aa31.47■■■□□ 2.63
MMP23B-206ENST00000486400 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
MMP23B-206ENST00000486400 SNAPC4Q5SXM2 1469 aa31.44■■■□□ 2.62
MMP23B-206ENST00000486400 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
MMP23B-206ENST00000486400 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
MMP23B-206ENST00000486400 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
MMP23B-206ENST00000486400 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
MMP23B-206ENST00000486400 SYNJ1O43426 1573 aa31.33■■■□□ 2.61
MMP23B-206ENST00000486400 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
MMP23B-206ENST00000486400 SYNJ2O15056 1496 aa31.26■■■□□ 2.59
MMP23B-206ENST00000486400 TRHP20396 242 aaPredicted RBP31.25■■■□□ 2.59
MMP23B-206ENST00000486400 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
MMP23B-206ENST00000486400 ABCA10Q8WWZ4 1543 aa31.16■■■□□ 2.58
MMP23B-206ENST00000486400 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
MMP23B-206ENST00000486400 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
MMP23B-206ENST00000486400 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
MMP23B-206ENST00000486400 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
MMP23B-206ENST00000486400 TOP2BQ02880 1626 aa30.95■■■□□ 2.55
MMP23B-206ENST00000486400 GRIN2AQ12879 1464 aa30.95■■■□□ 2.54
MMP23B-206ENST00000486400 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
MMP23B-206ENST00000486400 CEP170Q5SW79 1584 aa30.84■■■□□ 2.53
MMP23B-206ENST00000486400 NUP160Q12769 1436 aa30.83■■■□□ 2.53
MMP23B-206ENST00000486400 ERCC6L2Q5T890 1561 aa30.83■■■□□ 2.53
MMP23B-206ENST00000486400 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
MMP23B-206ENST00000486400 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
MMP23B-206ENST00000486400 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
MMP23B-206ENST00000486400 PRG4Q92954 1404 aaPredicted RBP30.55■■■□□ 2.48
MMP23B-206ENST00000486400 JPH4Q96JJ6 628 aa30.51■■■□□ 2.47
MMP23B-206ENST00000486400 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
MMP23B-206ENST00000486400 KIF13AQ9H1H9 1805 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms