RNA–Protein interactions for RNA: ENST00000486375.1

COLGALT2-204, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

TSL 2

Gene COLGALT2, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-204ENST00000486375 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
COLGALT2-204ENST00000486375 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
COLGALT2-204ENST00000486375 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
COLGALT2-204ENST00000486375 ABCC9O60706 1549 aa24.84■■□□□ 1.57
COLGALT2-204ENST00000486375 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
COLGALT2-204ENST00000486375 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
COLGALT2-204ENST00000486375 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
COLGALT2-204ENST00000486375 NACADO15069 1562 aa24.5■■□□□ 1.51
COLGALT2-204ENST00000486375 RB1CC1Q8TDY2 1594 aa24.34■■□□□ 1.49
COLGALT2-204ENST00000486375 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
COLGALT2-204ENST00000486375 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
COLGALT2-204ENST00000486375 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
COLGALT2-204ENST00000486375 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
COLGALT2-204ENST00000486375 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
COLGALT2-204ENST00000486375 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.29
COLGALT2-204ENST00000486375 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
COLGALT2-204ENST00000486375 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
COLGALT2-204ENST00000486375 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
COLGALT2-204ENST00000486375 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
COLGALT2-204ENST00000486375 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
COLGALT2-204ENST00000486375 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
COLGALT2-204ENST00000486375 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
COLGALT2-204ENST00000486375 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
COLGALT2-204ENST00000486375 WIZO95785 1651 aa22.69■■□□□ 1.22
COLGALT2-204ENST00000486375 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
COLGALT2-204ENST00000486375 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
COLGALT2-204ENST00000486375 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
COLGALT2-204ENST00000486375 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
COLGALT2-204ENST00000486375 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
COLGALT2-204ENST00000486375 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
COLGALT2-204ENST00000486375 CCDC88BA6NC98 1476 aa22.29■■□□□ 1.16
COLGALT2-204ENST00000486375 CFTRP13569 1480 aa21.96■■□□□ 1.11
COLGALT2-204ENST00000486375 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
COLGALT2-204ENST00000486375 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
COLGALT2-204ENST00000486375 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
COLGALT2-204ENST00000486375 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
COLGALT2-204ENST00000486375 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
COLGALT2-204ENST00000486375 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
COLGALT2-204ENST00000486375 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
COLGALT2-204ENST00000486375 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
COLGALT2-204ENST00000486375 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
COLGALT2-204ENST00000486375 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
COLGALT2-204ENST00000486375 NESP48681 1621 aa21.65■■□□□ 1.06
COLGALT2-204ENST00000486375 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
COLGALT2-204ENST00000486375 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
COLGALT2-204ENST00000486375 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
COLGALT2-204ENST00000486375 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
COLGALT2-204ENST00000486375 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
COLGALT2-204ENST00000486375 CUX1P39880 1505 aa21.48■■□□□ 1.03
COLGALT2-204ENST00000486375 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
COLGALT2-204ENST00000486375 EEA1Q15075 1411 aa21.45■■□□□ 1.02
COLGALT2-204ENST00000486375 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
COLGALT2-204ENST00000486375 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
COLGALT2-204ENST00000486375 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
COLGALT2-204ENST00000486375 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
COLGALT2-204ENST00000486375 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
COLGALT2-204ENST00000486375 WDR62O43379 1518 aa21.29■■□□□ 1
COLGALT2-204ENST00000486375 KIF27Q86VH2 1401 aa21.28■■□□□ 1
COLGALT2-204ENST00000486375 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
COLGALT2-204ENST00000486375 SOGA1O94964 1423 aa21.25■□□□□ 0.99
COLGALT2-204ENST00000486375 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
COLGALT2-204ENST00000486375 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
COLGALT2-204ENST00000486375 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
COLGALT2-204ENST00000486375 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
COLGALT2-204ENST00000486375 CUX2O14529 1486 aa21.18■□□□□ 0.98
COLGALT2-204ENST00000486375 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
COLGALT2-204ENST00000486375 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
COLGALT2-204ENST00000486375 RAD54L2Q9Y4B4 1467 aa21.11■□□□□ 0.97
COLGALT2-204ENST00000486375 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
COLGALT2-204ENST00000486375 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
COLGALT2-204ENST00000486375 KIF21BO75037 1637 aa21.03■□□□□ 0.96
COLGALT2-204ENST00000486375 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
COLGALT2-204ENST00000486375 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
COLGALT2-204ENST00000486375 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
COLGALT2-204ENST00000486375 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
COLGALT2-204ENST00000486375 IGF1RP08069 1367 aa20.97■□□□□ 0.95
COLGALT2-204ENST00000486375 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
COLGALT2-204ENST00000486375 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
COLGALT2-204ENST00000486375 CUL7Q14999 1698 aa20.96■□□□□ 0.95
COLGALT2-204ENST00000486375 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
COLGALT2-204ENST00000486375 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
COLGALT2-204ENST00000486375 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
COLGALT2-204ENST00000486375 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
COLGALT2-204ENST00000486375 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
COLGALT2-204ENST00000486375 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
COLGALT2-204ENST00000486375 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.93
COLGALT2-204ENST00000486375 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
COLGALT2-204ENST00000486375 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
COLGALT2-204ENST00000486375 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
COLGALT2-204ENST00000486375 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
COLGALT2-204ENST00000486375 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
COLGALT2-204ENST00000486375 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
COLGALT2-204ENST00000486375 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
COLGALT2-204ENST00000486375 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
COLGALT2-204ENST00000486375 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
COLGALT2-204ENST00000486375 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
COLGALT2-204ENST00000486375 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
COLGALT2-204ENST00000486375 CLIP1P30622 1438 aa20.64■□□□□ 0.89
COLGALT2-204ENST00000486375 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
COLGALT2-204ENST00000486375 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms