RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
ERGIC3-215ENST00000486268 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
ERGIC3-215ENST00000486268 ABCC9O60706 1549 aa23.19■■□□□ 1.3
ERGIC3-215ENST00000486268 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
ERGIC3-215ENST00000486268 NACADO15069 1562 aa22.44■■□□□ 1.18
ERGIC3-215ENST00000486268 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
ERGIC3-215ENST00000486268 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
ERGIC3-215ENST00000486268 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
ERGIC3-215ENST00000486268 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
ERGIC3-215ENST00000486268 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
ERGIC3-215ENST00000486268 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
ERGIC3-215ENST00000486268 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
ERGIC3-215ENST00000486268 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
ERGIC3-215ENST00000486268 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
ERGIC3-215ENST00000486268 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
ERGIC3-215ENST00000486268 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
ERGIC3-215ENST00000486268 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
ERGIC3-215ENST00000486268 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.96
ERGIC3-215ENST00000486268 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
ERGIC3-215ENST00000486268 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
ERGIC3-215ENST00000486268 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
ERGIC3-215ENST00000486268 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
ERGIC3-215ENST00000486268 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
ERGIC3-215ENST00000486268 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
ERGIC3-215ENST00000486268 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
ERGIC3-215ENST00000486268 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
ERGIC3-215ENST00000486268 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
ERGIC3-215ENST00000486268 WIZO95785 1651 aa20.69■□□□□ 0.9
ERGIC3-215ENST00000486268 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
ERGIC3-215ENST00000486268 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
ERGIC3-215ENST00000486268 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
ERGIC3-215ENST00000486268 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
ERGIC3-215ENST00000486268 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ERGIC3-215ENST00000486268 NESP48681 1621 aa20.17■□□□□ 0.82
ERGIC3-215ENST00000486268 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
ERGIC3-215ENST00000486268 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
ERGIC3-215ENST00000486268 CFTRP13569 1480 aa20.05■□□□□ 0.8
ERGIC3-215ENST00000486268 PRDM2Q13029 1718 aa20■□□□□ 0.79
ERGIC3-215ENST00000486268 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
ERGIC3-215ENST00000486268 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
ERGIC3-215ENST00000486268 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
ERGIC3-215ENST00000486268 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
ERGIC3-215ENST00000486268 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
ERGIC3-215ENST00000486268 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
ERGIC3-215ENST00000486268 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
ERGIC3-215ENST00000486268 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
ERGIC3-215ENST00000486268 WDR62O43379 1518 aa19.71■□□□□ 0.75
ERGIC3-215ENST00000486268 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
ERGIC3-215ENST00000486268 CUX2O14529 1486 aa19.69■□□□□ 0.74
ERGIC3-215ENST00000486268 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ERGIC3-215ENST00000486268 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
ERGIC3-215ENST00000486268 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
ERGIC3-215ENST00000486268 CUX1P39880 1505 aa19.58■□□□□ 0.73
ERGIC3-215ENST00000486268 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
ERGIC3-215ENST00000486268 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
ERGIC3-215ENST00000486268 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
ERGIC3-215ENST00000486268 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
ERGIC3-215ENST00000486268 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
ERGIC3-215ENST00000486268 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
ERGIC3-215ENST00000486268 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
ERGIC3-215ENST00000486268 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
ERGIC3-215ENST00000486268 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
ERGIC3-215ENST00000486268 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
ERGIC3-215ENST00000486268 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
ERGIC3-215ENST00000486268 SOGA1O94964 1423 aa19.34■□□□□ 0.69
ERGIC3-215ENST00000486268 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
ERGIC3-215ENST00000486268 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
ERGIC3-215ENST00000486268 ABCA10Q8WWZ4 1543 aa19.26■□□□□ 0.67
ERGIC3-215ENST00000486268 EEA1Q15075 1411 aa19.25■□□□□ 0.67
ERGIC3-215ENST00000486268 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.673e-8■■■■□ 19.7
ERGIC3-215ENST00000486268 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
ERGIC3-215ENST00000486268 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
ERGIC3-215ENST00000486268 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
ERGIC3-215ENST00000486268 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.65
ERGIC3-215ENST00000486268 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
ERGIC3-215ENST00000486268 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
ERGIC3-215ENST00000486268 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
ERGIC3-215ENST00000486268 SNAPC4Q5SXM2 1469 aa19.07■□□□□ 0.64
ERGIC3-215ENST00000486268 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
ERGIC3-215ENST00000486268 CSRNP3Q8WYN3 585 aa19.03■□□□□ 0.64
ERGIC3-215ENST00000486268 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
ERGIC3-215ENST00000486268 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
ERGIC3-215ENST00000486268 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
ERGIC3-215ENST00000486268 CHD1O14646 1710 aa19.02■□□□□ 0.63
ERGIC3-215ENST00000486268 ADAMTS12P58397 1594 aa19■□□□□ 0.63
ERGIC3-215ENST00000486268 IGF1RP08069 1367 aa18.95■□□□□ 0.62
ERGIC3-215ENST00000486268 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
ERGIC3-215ENST00000486268 KIF21BO75037 1637 aa18.92■□□□□ 0.62
ERGIC3-215ENST00000486268 CUL7Q14999 1698 aa18.92■□□□□ 0.62
ERGIC3-215ENST00000486268 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
ERGIC3-215ENST00000486268 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
ERGIC3-215ENST00000486268 FBLN2P98095 1184 aa18.87■□□□□ 0.61
ERGIC3-215ENST00000486268 GRIN2AQ12879 1464 aa18.87■□□□□ 0.61
ERGIC3-215ENST00000486268 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
ERGIC3-215ENST00000486268 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
ERGIC3-215ENST00000486268 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
ERGIC3-215ENST00000486268 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
ERGIC3-215ENST00000486268 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
ERGIC3-215ENST00000486268 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
ERGIC3-215ENST00000486268 NUP160Q12769 1436 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms