RNA–Protein interactions for RNA: ENST00000486226.1

MCCC1-206, Transcript of methylcrotonoyl-CoA carboxylase 1, humanhuman

TSL 3

Gene MCCC1, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC1-206ENST00000486226 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
MCCC1-206ENST00000486226 ABCC9O60706 1549 aa39.55■■■■□ 3.92
MCCC1-206ENST00000486226 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
MCCC1-206ENST00000486226 RB1CC1Q8TDY2 1594 aa37.66■■■■□ 3.62
MCCC1-206ENST00000486226 NACADO15069 1562 aa37.37■■■■□ 3.57
MCCC1-206ENST00000486226 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
MCCC1-206ENST00000486226 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
MCCC1-206ENST00000486226 UNC13AQ9UPW8 1703 aa36.82■■■■□ 3.48
MCCC1-206ENST00000486226 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
MCCC1-206ENST00000486226 PABPN1Q86U42 306 aaKnown RBP eCLIP36.74■■■■□ 3.47
MCCC1-206ENST00000486226 BICRAQ9NZM4 1560 aa36.51■■■■□ 3.44
MCCC1-206ENST00000486226 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
MCCC1-206ENST00000486226 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
MCCC1-206ENST00000486226 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
MCCC1-206ENST00000486226 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
MCCC1-206ENST00000486226 CC2D2AQ9P2K1 1620 aa35.75■■■■□ 3.31
MCCC1-206ENST00000486226 EIF4G1Q04637 1599 aaKnown RBP35.65■■■■□ 3.3
MCCC1-206ENST00000486226 CECR2Q9BXF3 1484 aa35.64■■■■□ 3.3
MCCC1-206ENST00000486226 NCAPD3P42695 1498 aa34.45■■■■□ 3.1
MCCC1-206ENST00000486226 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
MCCC1-206ENST00000486226 SMARCA4P51532 1647 aa34.32■■■■□ 3.08
MCCC1-206ENST00000486226 SMARCA2P51531 1590 aa34.29■■■■□ 3.08
MCCC1-206ENST00000486226 HMGXB3Q12766 1538 aa34.25■■■■□ 3.07
MCCC1-206ENST00000486226 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
MCCC1-206ENST00000486226 CUX2O14529 1486 aa34.16■■■■□ 3.06
MCCC1-206ENST00000486226 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
MCCC1-206ENST00000486226 DNAJC5Q9H3Z4 198 aa34.14■■■■□ 3.06
MCCC1-206ENST00000486226 BAZ1BQ9UIG0 1483 aaKnown RBP34.04■■■■□ 3.04
MCCC1-206ENST00000486226 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
MCCC1-206ENST00000486226 NESP48681 1621 aa33.93■■■■□ 3.02
MCCC1-206ENST00000486226 MROH2BQ7Z745 1585 aa33.83■■■■□ 3.01
MCCC1-206ENST00000486226 LAMC3Q9Y6N6 1575 aa33.76■■■□□ 2.99
MCCC1-206ENST00000486226 THOC2Q8NI27 1593 aaKnown RBP33.67■■■□□ 2.98
MCCC1-206ENST00000486226 KIF21AQ7Z4S6 1674 aa33.56■■■□□ 2.96
MCCC1-206ENST00000486226 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
MCCC1-206ENST00000486226 WIZO95785 1651 aa33.45■■■□□ 2.94
MCCC1-206ENST00000486226 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
MCCC1-206ENST00000486226 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
MCCC1-206ENST00000486226 WDR62O43379 1518 aa33.18■■■□□ 2.9
MCCC1-206ENST00000486226 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
MCCC1-206ENST00000486226 RSF1Q96T23 1441 aaPredicted RBP33.08■■■□□ 2.89
MCCC1-206ENST00000486226 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
MCCC1-206ENST00000486226 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
MCCC1-206ENST00000486226 CFTRP13569 1480 aa33■■■□□ 2.87
MCCC1-206ENST00000486226 PRDM2Q13029 1718 aa32.79■■■□□ 2.84
MCCC1-206ENST00000486226 URB2Q14146 1524 aaKnown RBP32.77■■■□□ 2.84
MCCC1-206ENST00000486226 TRIM41Q8WV44 630 aa32.66■■■□□ 2.82
MCCC1-206ENST00000486226 CCDC88BA6NC98 1476 aa32.61■■■□□ 2.81
MCCC1-206ENST00000486226 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
MCCC1-206ENST00000486226 IFT140Q96RY7 1462 aa32.44■■■□□ 2.78
MCCC1-206ENST00000486226 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
MCCC1-206ENST00000486226 ABCC8Q09428 1581 aa32.36■■■□□ 2.77
MCCC1-206ENST00000486226 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
MCCC1-206ENST00000486226 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
MCCC1-206ENST00000486226 EIF4G3O43432 1585 aaKnown RBP32.25■■■□□ 2.75
MCCC1-206ENST00000486226 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
MCCC1-206ENST00000486226 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
MCCC1-206ENST00000486226 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
MCCC1-206ENST00000486226 TARBP1Q13395 1621 aaKnown RBP32.14■■■□□ 2.74
MCCC1-206ENST00000486226 POLA1P09884 1462 aaPredicted RBP32.07■■■□□ 2.72
MCCC1-206ENST00000486226 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
MCCC1-206ENST00000486226 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.72
MCCC1-206ENST00000486226 CHD1O14646 1710 aa32.03■■■□□ 2.72
MCCC1-206ENST00000486226 RAD54L2Q9Y4B4 1467 aa31.92■■■□□ 2.7
MCCC1-206ENST00000486226 SOGA1O94964 1423 aa31.9■■■□□ 2.7
MCCC1-206ENST00000486226 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
MCCC1-206ENST00000486226 FGD5Q6ZNL6 1462 aa31.86■■■□□ 2.69
MCCC1-206ENST00000486226 FBLN2P98095 1184 aa31.86■■■□□ 2.69
MCCC1-206ENST00000486226 TDRD9Q8NDG6 1382 aaKnown RBP31.82■■■□□ 2.69
MCCC1-206ENST00000486226 CUX1P39880 1505 aa31.81■■■□□ 2.68
MCCC1-206ENST00000486226 SNAPC4Q5SXM2 1469 aa31.77■■■□□ 2.68
MCCC1-206ENST00000486226 CYB5RLQ6IPT4 315 aa31.76■■■□□ 2.67
MCCC1-206ENST00000486226 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
MCCC1-206ENST00000486226 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.66
MCCC1-206ENST00000486226 GRIN2BQ13224 1484 aa31.67■■■□□ 2.66
MCCC1-206ENST00000486226 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
MCCC1-206ENST00000486226 CLASP1Q7Z460 1538 aa31.64■■■□□ 2.66
MCCC1-206ENST00000486226 CHMP7Q8WUX9 453 aaPredicted RBP31.62■■■□□ 2.65
MCCC1-206ENST00000486226 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
MCCC1-206ENST00000486226 SYNJ2O15056 1496 aa31.57■■■□□ 2.64
MCCC1-206ENST00000486226 GAPVD1Q14C86 1478 aa31.53■■■□□ 2.64
MCCC1-206ENST00000486226 SUPT5HO00267 1087 aaKnown RBP31.53■■■□□ 2.64
MCCC1-206ENST00000486226 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
MCCC1-206ENST00000486226 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
MCCC1-206ENST00000486226 TRHP20396 242 aaPredicted RBP31.47■■■□□ 2.63
MCCC1-206ENST00000486226 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
MCCC1-206ENST00000486226 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
MCCC1-206ENST00000486226 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
MCCC1-206ENST00000486226 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
MCCC1-206ENST00000486226 ADAMTS12P58397 1594 aa31.26■■■□□ 2.6
MCCC1-206ENST00000486226 CEP170Q5SW79 1584 aa31.16■■■□□ 2.58
MCCC1-206ENST00000486226 NUP160Q12769 1436 aa31.15■■■□□ 2.58
MCCC1-206ENST00000486226 FHAD1B1AJZ9 1412 aa31.14■■■□□ 2.58
MCCC1-206ENST00000486226 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
MCCC1-206ENST00000486226 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
MCCC1-206ENST00000486226 SHROOM2Q13796 1616 aa31.05■■■□□ 2.56
MCCC1-206ENST00000486226 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
MCCC1-206ENST00000486226 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
MCCC1-206ENST00000486226 JPH4Q96JJ6 628 aa30.78■■■□□ 2.52
MCCC1-206ENST00000486226 CUL7Q14999 1698 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms