RNA–Protein interactions for RNA: ENST00000486147.1

HFE-213, Transcript of homeostatic iron regulator, humanhuman

TSL 1 (best)

Gene HFE, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-213ENST00000486147 NISCHQ9Y2I1 1504 aa36.02■■■■□ 3.36
HFE-213ENST00000486147 ABCC9O60706 1549 aa33.7■■■□□ 2.99
HFE-213ENST00000486147 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
HFE-213ENST00000486147 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
HFE-213ENST00000486147 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
HFE-213ENST00000486147 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
HFE-213ENST00000486147 NACADO15069 1562 aa31.13■■■□□ 2.57
HFE-213ENST00000486147 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
HFE-213ENST00000486147 BICRAQ9NZM4 1560 aa30.82■■■□□ 2.52
HFE-213ENST00000486147 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
HFE-213ENST00000486147 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
HFE-213ENST00000486147 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
HFE-213ENST00000486147 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
HFE-213ENST00000486147 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.46
HFE-213ENST00000486147 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
HFE-213ENST00000486147 EIF4G1Q04637 1599 aaKnown RBP30.08■■■□□ 2.41
HFE-213ENST00000486147 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
HFE-213ENST00000486147 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
HFE-213ENST00000486147 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
HFE-213ENST00000486147 CUX2O14529 1486 aa29.41■■■□□ 2.3
HFE-213ENST00000486147 ERCC6Q03468 1493 aa29.1■■■□□ 2.25
HFE-213ENST00000486147 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
HFE-213ENST00000486147 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
HFE-213ENST00000486147 NESP48681 1621 aa28.72■■■□□ 2.19
HFE-213ENST00000486147 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
HFE-213ENST00000486147 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
HFE-213ENST00000486147 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
HFE-213ENST00000486147 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
HFE-213ENST00000486147 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
HFE-213ENST00000486147 LAMC3Q9Y6N6 1575 aa28.26■■■□□ 2.11
HFE-213ENST00000486147 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
HFE-213ENST00000486147 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
HFE-213ENST00000486147 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
HFE-213ENST00000486147 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
HFE-213ENST00000486147 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
HFE-213ENST00000486147 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
HFE-213ENST00000486147 WDR62O43379 1518 aa27.96■■■□□ 2.07
HFE-213ENST00000486147 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
HFE-213ENST00000486147 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
HFE-213ENST00000486147 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
HFE-213ENST00000486147 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
HFE-213ENST00000486147 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
HFE-213ENST00000486147 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
HFE-213ENST00000486147 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
HFE-213ENST00000486147 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
HFE-213ENST00000486147 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
HFE-213ENST00000486147 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
HFE-213ENST00000486147 WIZO95785 1651 aa27.37■■□□□ 1.97
HFE-213ENST00000486147 CFTRP13569 1480 aa27.37■■□□□ 1.97
HFE-213ENST00000486147 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
HFE-213ENST00000486147 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
HFE-213ENST00000486147 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
HFE-213ENST00000486147 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
HFE-213ENST00000486147 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
HFE-213ENST00000486147 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
HFE-213ENST00000486147 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
HFE-213ENST00000486147 CHD1O14646 1710 aa26.99■■□□□ 1.91
HFE-213ENST00000486147 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
HFE-213ENST00000486147 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
HFE-213ENST00000486147 TOPBP1Q92547 1522 aa26.94■■□□□ 1.9
HFE-213ENST00000486147 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
HFE-213ENST00000486147 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
HFE-213ENST00000486147 FBLN2P98095 1184 aa26.8■■□□□ 1.88
HFE-213ENST00000486147 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
HFE-213ENST00000486147 DNMBPQ6XZF7 1577 aa26.72■■□□□ 1.87
HFE-213ENST00000486147 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
HFE-213ENST00000486147 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.87
HFE-213ENST00000486147 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
HFE-213ENST00000486147 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
HFE-213ENST00000486147 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
HFE-213ENST00000486147 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
HFE-213ENST00000486147 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
HFE-213ENST00000486147 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
HFE-213ENST00000486147 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
HFE-213ENST00000486147 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
HFE-213ENST00000486147 SOGA1O94964 1423 aa26.43■■□□□ 1.82
HFE-213ENST00000486147 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
HFE-213ENST00000486147 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
HFE-213ENST00000486147 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
HFE-213ENST00000486147 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
HFE-213ENST00000486147 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
HFE-213ENST00000486147 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
HFE-213ENST00000486147 ILDR1Q86SU0 546 aaPredicted RBP26.24■■□□□ 1.79
HFE-213ENST00000486147 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
HFE-213ENST00000486147 CUX1P39880 1505 aa26.14■■□□□ 1.78
HFE-213ENST00000486147 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
HFE-213ENST00000486147 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
HFE-213ENST00000486147 KDM4FA0A1W2PPD8 638 aa26.05■■□□□ 1.76
HFE-213ENST00000486147 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
HFE-213ENST00000486147 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
HFE-213ENST00000486147 NUP160Q12769 1436 aa25.97■■□□□ 1.75
HFE-213ENST00000486147 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
HFE-213ENST00000486147 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
HFE-213ENST00000486147 ABCC10Q5T3U5 1492 aa25.88■■□□□ 1.73
HFE-213ENST00000486147 FAM69CQ0P6D2 419 aa25.87■■□□□ 1.73
HFE-213ENST00000486147 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
HFE-213ENST00000486147 DIP2BQ9P265 1576 aa25.8■■□□□ 1.72
HFE-213ENST00000486147 KDM6BO15054 1643 aa25.78■■□□□ 1.72
HFE-213ENST00000486147 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
HFE-213ENST00000486147 MAPKBP1O60336 1514 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms