RNA–Protein interactions for RNA: ENST00000486134.1

PLD3-212, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 327 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-212ENST00000486134 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
PLD3-212ENST00000486134 ABCC9O60706 1549 aa30.52■■■□□ 2.48
PLD3-212ENST00000486134 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
PLD3-212ENST00000486134 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
PLD3-212ENST00000486134 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PLD3-212ENST00000486134 NACADO15069 1562 aa28.7■■■□□ 2.18
PLD3-212ENST00000486134 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
PLD3-212ENST00000486134 UNC13AQ9UPW8 1703 aa28.36■■■□□ 2.13
PLD3-212ENST00000486134 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
PLD3-212ENST00000486134 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
PLD3-212ENST00000486134 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
PLD3-212ENST00000486134 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
PLD3-212ENST00000486134 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
PLD3-212ENST00000486134 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
PLD3-212ENST00000486134 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
PLD3-212ENST00000486134 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
PLD3-212ENST00000486134 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
PLD3-212ENST00000486134 EIF4G1Q04637 1599 aaKnown RBP27.46■■□□□ 1.99
PLD3-212ENST00000486134 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
PLD3-212ENST00000486134 CUX2O14529 1486 aa26.5■■□□□ 1.83
PLD3-212ENST00000486134 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
PLD3-212ENST00000486134 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
PLD3-212ENST00000486134 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
PLD3-212ENST00000486134 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
PLD3-212ENST00000486134 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
PLD3-212ENST00000486134 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
PLD3-212ENST00000486134 NESP48681 1621 aa26.14■■□□□ 1.77
PLD3-212ENST00000486134 BAZ1AQ9NRL2 1556 aaPredicted RBP26.06■■□□□ 1.76
PLD3-212ENST00000486134 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
PLD3-212ENST00000486134 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
PLD3-212ENST00000486134 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
PLD3-212ENST00000486134 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
PLD3-212ENST00000486134 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
PLD3-212ENST00000486134 MROH2BQ7Z745 1585 aa25.81■■□□□ 1.72
PLD3-212ENST00000486134 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
PLD3-212ENST00000486134 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
PLD3-212ENST00000486134 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
PLD3-212ENST00000486134 WDR62O43379 1518 aa25.54■■□□□ 1.68
PLD3-212ENST00000486134 WIZO95785 1651 aa25.49■■□□□ 1.67
PLD3-212ENST00000486134 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
PLD3-212ENST00000486134 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
PLD3-212ENST00000486134 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
PLD3-212ENST00000486134 CFTRP13569 1480 aa25.29■■□□□ 1.64
PLD3-212ENST00000486134 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
PLD3-212ENST00000486134 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
PLD3-212ENST00000486134 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
PLD3-212ENST00000486134 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
PLD3-212ENST00000486134 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
PLD3-212ENST00000486134 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
PLD3-212ENST00000486134 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
PLD3-212ENST00000486134 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
PLD3-212ENST00000486134 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
PLD3-212ENST00000486134 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
PLD3-212ENST00000486134 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
PLD3-212ENST00000486134 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
PLD3-212ENST00000486134 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
PLD3-212ENST00000486134 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
PLD3-212ENST00000486134 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
PLD3-212ENST00000486134 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
PLD3-212ENST00000486134 CHD1O14646 1710 aa24.66■■□□□ 1.54
PLD3-212ENST00000486134 TARBP1Q13395 1621 aaKnown RBP24.66■■□□□ 1.54
PLD3-212ENST00000486134 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
PLD3-212ENST00000486134 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.53
PLD3-212ENST00000486134 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
PLD3-212ENST00000486134 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
PLD3-212ENST00000486134 FBLN2P98095 1184 aa24.5■■□□□ 1.51
PLD3-212ENST00000486134 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
PLD3-212ENST00000486134 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
PLD3-212ENST00000486134 SOGA1O94964 1423 aa24.44■■□□□ 1.5
PLD3-212ENST00000486134 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
PLD3-212ENST00000486134 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
PLD3-212ENST00000486134 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
PLD3-212ENST00000486134 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
PLD3-212ENST00000486134 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
PLD3-212ENST00000486134 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
PLD3-212ENST00000486134 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
PLD3-212ENST00000486134 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
PLD3-212ENST00000486134 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
PLD3-212ENST00000486134 CUX1P39880 1505 aa24.26■■□□□ 1.47
PLD3-212ENST00000486134 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
PLD3-212ENST00000486134 PBRM1Q86U86 1689 aa24.17■■□□□ 1.46
PLD3-212ENST00000486134 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
PLD3-212ENST00000486134 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
PLD3-212ENST00000486134 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
PLD3-212ENST00000486134 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
PLD3-212ENST00000486134 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
PLD3-212ENST00000486134 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
PLD3-212ENST00000486134 NUP160Q12769 1436 aa23.9■■□□□ 1.42
PLD3-212ENST00000486134 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
PLD3-212ENST00000486134 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
PLD3-212ENST00000486134 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
PLD3-212ENST00000486134 SHROOM2Q13796 1616 aa23.86■■□□□ 1.41
PLD3-212ENST00000486134 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
PLD3-212ENST00000486134 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
PLD3-212ENST00000486134 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PLD3-212ENST00000486134 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
PLD3-212ENST00000486134 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
PLD3-212ENST00000486134 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
PLD3-212ENST00000486134 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
PLD3-212ENST00000486134 JPH4Q96JJ6 628 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms