RNA–Protein interactions for RNA: ENST00000486120.5

PACSIN1-203, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 3

Gene PACSIN1, Length 855 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-203ENST00000486120 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
PACSIN1-203ENST00000486120 ABCC9O60706 1549 aa31.45■■■□□ 2.63
PACSIN1-203ENST00000486120 CCDC180Q9P1Z9 1646 aa31.03■■■□□ 2.56
PACSIN1-203ENST00000486120 DNAJC5BQ9UF47 199 aa29.72■■■□□ 2.35
PACSIN1-203ENST00000486120 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
PACSIN1-203ENST00000486120 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
PACSIN1-203ENST00000486120 NACADO15069 1562 aa29.43■■■□□ 2.3
PACSIN1-203ENST00000486120 PABPN1Q86U42 306 aaKnown RBP eCLIP29.36■■■□□ 2.29
PACSIN1-203ENST00000486120 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
PACSIN1-203ENST00000486120 BICRAQ9NZM4 1560 aa28.89■■■□□ 2.22
PACSIN1-203ENST00000486120 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
PACSIN1-203ENST00000486120 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
PACSIN1-203ENST00000486120 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
PACSIN1-203ENST00000486120 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
PACSIN1-203ENST00000486120 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
PACSIN1-203ENST00000486120 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
PACSIN1-203ENST00000486120 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
PACSIN1-203ENST00000486120 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
PACSIN1-203ENST00000486120 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
PACSIN1-203ENST00000486120 NCAPD3P42695 1498 aa27.21■■□□□ 1.95
PACSIN1-203ENST00000486120 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
PACSIN1-203ENST00000486120 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
PACSIN1-203ENST00000486120 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
PACSIN1-203ENST00000486120 SMARCA2P51531 1590 aa27■■□□□ 1.91
PACSIN1-203ENST00000486120 NESP48681 1621 aa26.98■■□□□ 1.91
PACSIN1-203ENST00000486120 CUX2O14529 1486 aa26.98■■□□□ 1.91
PACSIN1-203ENST00000486120 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
PACSIN1-203ENST00000486120 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
PACSIN1-203ENST00000486120 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
PACSIN1-203ENST00000486120 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
PACSIN1-203ENST00000486120 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
PACSIN1-203ENST00000486120 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
PACSIN1-203ENST00000486120 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
PACSIN1-203ENST00000486120 KIF21AQ7Z4S6 1674 aa26.53■■□□□ 1.84
PACSIN1-203ENST00000486120 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
PACSIN1-203ENST00000486120 WIZO95785 1651 aa26.47■■□□□ 1.83
PACSIN1-203ENST00000486120 CADPSQ9ULU8 1353 aa26.44■■□□□ 1.82
PACSIN1-203ENST00000486120 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
PACSIN1-203ENST00000486120 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
PACSIN1-203ENST00000486120 WDR62O43379 1518 aa26.18■■□□□ 1.78
PACSIN1-203ENST00000486120 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
PACSIN1-203ENST00000486120 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
PACSIN1-203ENST00000486120 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
PACSIN1-203ENST00000486120 CFTRP13569 1480 aa26.06■■□□□ 1.76
PACSIN1-203ENST00000486120 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
PACSIN1-203ENST00000486120 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
PACSIN1-203ENST00000486120 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
PACSIN1-203ENST00000486120 CCDC88BA6NC98 1476 aa25.83■■□□□ 1.73
PACSIN1-203ENST00000486120 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
PACSIN1-203ENST00000486120 PRDM2Q13029 1718 aa25.69■■□□□ 1.7
PACSIN1-203ENST00000486120 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
PACSIN1-203ENST00000486120 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
PACSIN1-203ENST00000486120 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
PACSIN1-203ENST00000486120 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
PACSIN1-203ENST00000486120 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
PACSIN1-203ENST00000486120 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
PACSIN1-203ENST00000486120 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
PACSIN1-203ENST00000486120 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
PACSIN1-203ENST00000486120 EIF4G3O43432 1585 aaKnown RBP25.45■■□□□ 1.66
PACSIN1-203ENST00000486120 FBLN2P98095 1184 aa25.43■■□□□ 1.66
PACSIN1-203ENST00000486120 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
PACSIN1-203ENST00000486120 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
PACSIN1-203ENST00000486120 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
PACSIN1-203ENST00000486120 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
PACSIN1-203ENST00000486120 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
PACSIN1-203ENST00000486120 CHD1O14646 1710 aa25.32■■□□□ 1.64
PACSIN1-203ENST00000486120 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
PACSIN1-203ENST00000486120 SOGA1O94964 1423 aa25.29■■□□□ 1.64
PACSIN1-203ENST00000486120 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
PACSIN1-203ENST00000486120 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
PACSIN1-203ENST00000486120 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
PACSIN1-203ENST00000486120 CUX1P39880 1505 aa25.16■■□□□ 1.62
PACSIN1-203ENST00000486120 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
PACSIN1-203ENST00000486120 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
PACSIN1-203ENST00000486120 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
PACSIN1-203ENST00000486120 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
PACSIN1-203ENST00000486120 CLASP1Q7Z460 1538 aa24.97■■□□□ 1.59
PACSIN1-203ENST00000486120 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
PACSIN1-203ENST00000486120 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
PACSIN1-203ENST00000486120 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
PACSIN1-203ENST00000486120 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
PACSIN1-203ENST00000486120 SYNJ2O15056 1496 aa24.93■■□□□ 1.58
PACSIN1-203ENST00000486120 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
PACSIN1-203ENST00000486120 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
PACSIN1-203ENST00000486120 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
PACSIN1-203ENST00000486120 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
PACSIN1-203ENST00000486120 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
PACSIN1-203ENST00000486120 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
PACSIN1-203ENST00000486120 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
PACSIN1-203ENST00000486120 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
PACSIN1-203ENST00000486120 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
PACSIN1-203ENST00000486120 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
PACSIN1-203ENST00000486120 NUP160Q12769 1436 aa24.6■■□□□ 1.53
PACSIN1-203ENST00000486120 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
PACSIN1-203ENST00000486120 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
PACSIN1-203ENST00000486120 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
PACSIN1-203ENST00000486120 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
PACSIN1-203ENST00000486120 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
PACSIN1-203ENST00000486120 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
PACSIN1-203ENST00000486120 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms