RNA–Protein interactions for RNA: ENST00000486110.1

HHLA3-205, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 473 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-205ENST00000486110 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
HHLA3-205ENST00000486110 ABCC9O60706 1549 aa23.67■■□□□ 1.38
HHLA3-205ENST00000486110 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
HHLA3-205ENST00000486110 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
HHLA3-205ENST00000486110 NACADO15069 1562 aa22.35■■□□□ 1.17
HHLA3-205ENST00000486110 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
HHLA3-205ENST00000486110 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
HHLA3-205ENST00000486110 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
HHLA3-205ENST00000486110 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
HHLA3-205ENST00000486110 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
HHLA3-205ENST00000486110 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
HHLA3-205ENST00000486110 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
HHLA3-205ENST00000486110 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
HHLA3-205ENST00000486110 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
HHLA3-205ENST00000486110 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
HHLA3-205ENST00000486110 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
HHLA3-205ENST00000486110 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
HHLA3-205ENST00000486110 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
HHLA3-205ENST00000486110 NCAPD3P42695 1498 aa20.58■□□□□ 0.89
HHLA3-205ENST00000486110 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
HHLA3-205ENST00000486110 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
HHLA3-205ENST00000486110 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
HHLA3-205ENST00000486110 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
HHLA3-205ENST00000486110 CUX2O14529 1486 aa20.49■□□□□ 0.87
HHLA3-205ENST00000486110 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
HHLA3-205ENST00000486110 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
HHLA3-205ENST00000486110 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
HHLA3-205ENST00000486110 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
HHLA3-205ENST00000486110 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
HHLA3-205ENST00000486110 NESP48681 1621 aa20.26■□□□□ 0.83
HHLA3-205ENST00000486110 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
HHLA3-205ENST00000486110 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
HHLA3-205ENST00000486110 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
HHLA3-205ENST00000486110 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
HHLA3-205ENST00000486110 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
HHLA3-205ENST00000486110 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
HHLA3-205ENST00000486110 WIZO95785 1651 aa19.94■□□□□ 0.78
HHLA3-205ENST00000486110 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
HHLA3-205ENST00000486110 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
HHLA3-205ENST00000486110 WDR62O43379 1518 aa19.84■□□□□ 0.77
HHLA3-205ENST00000486110 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
HHLA3-205ENST00000486110 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
HHLA3-205ENST00000486110 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
HHLA3-205ENST00000486110 CFTRP13569 1480 aa19.72■□□□□ 0.75
HHLA3-205ENST00000486110 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
HHLA3-205ENST00000486110 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
HHLA3-205ENST00000486110 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
HHLA3-205ENST00000486110 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
HHLA3-205ENST00000486110 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
HHLA3-205ENST00000486110 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
HHLA3-205ENST00000486110 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
HHLA3-205ENST00000486110 TOPBP1Q92547 1522 aa19.37■□□□□ 0.69
HHLA3-205ENST00000486110 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
HHLA3-205ENST00000486110 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
HHLA3-205ENST00000486110 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
HHLA3-205ENST00000486110 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
HHLA3-205ENST00000486110 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
HHLA3-205ENST00000486110 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
HHLA3-205ENST00000486110 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
HHLA3-205ENST00000486110 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
HHLA3-205ENST00000486110 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
HHLA3-205ENST00000486110 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
HHLA3-205ENST00000486110 FBLN2P98095 1184 aa19.15■□□□□ 0.66
HHLA3-205ENST00000486110 CHD1O14646 1710 aa19.14■□□□□ 0.65
HHLA3-205ENST00000486110 SOGA1O94964 1423 aa19.09■□□□□ 0.65
HHLA3-205ENST00000486110 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
HHLA3-205ENST00000486110 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
HHLA3-205ENST00000486110 CYB5RLQ6IPT4 315 aa19.05■□□□□ 0.64
HHLA3-205ENST00000486110 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
HHLA3-205ENST00000486110 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
HHLA3-205ENST00000486110 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
HHLA3-205ENST00000486110 MAGI1Q96QZ7 1491 aaPredicted RBP18.98■□□□□ 0.63
HHLA3-205ENST00000486110 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
HHLA3-205ENST00000486110 CUX1P39880 1505 aa18.98■□□□□ 0.63
HHLA3-205ENST00000486110 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
HHLA3-205ENST00000486110 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
HHLA3-205ENST00000486110 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
HHLA3-205ENST00000486110 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
HHLA3-205ENST00000486110 SYNJ2O15056 1496 aa18.91■□□□□ 0.62
HHLA3-205ENST00000486110 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
HHLA3-205ENST00000486110 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
HHLA3-205ENST00000486110 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
HHLA3-205ENST00000486110 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
HHLA3-205ENST00000486110 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
HHLA3-205ENST00000486110 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
HHLA3-205ENST00000486110 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
HHLA3-205ENST00000486110 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
HHLA3-205ENST00000486110 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
HHLA3-205ENST00000486110 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
HHLA3-205ENST00000486110 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
HHLA3-205ENST00000486110 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
HHLA3-205ENST00000486110 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
HHLA3-205ENST00000486110 NUP160Q12769 1436 aa18.61■□□□□ 0.57
HHLA3-205ENST00000486110 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
HHLA3-205ENST00000486110 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
HHLA3-205ENST00000486110 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
HHLA3-205ENST00000486110 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
HHLA3-205ENST00000486110 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
HHLA3-205ENST00000486110 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
HHLA3-205ENST00000486110 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms