RNA–Protein interactions for RNA: ENST00000486087.3

RN7SL655P-201, Transcript of RNA, 7SL, cytoplasmic 655, pseudogene, humanhuman

BASIC

Gene RN7SL655P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL655P-201ENST00000486087 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
RN7SL655P-201ENST00000486087 ABCC9O60706 1549 aa15.85■□□□□ 0.13
RN7SL655P-201ENST00000486087 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
RN7SL655P-201ENST00000486087 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
RN7SL655P-201ENST00000486087 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
RN7SL655P-201ENST00000486087 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
RN7SL655P-201ENST00000486087 NACADO15069 1562 aa14.84□□□□□ -0.03
RN7SL655P-201ENST00000486087 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
RN7SL655P-201ENST00000486087 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
RN7SL655P-201ENST00000486087 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
RN7SL655P-201ENST00000486087 MYO15BQ96JP2 1530 aa14.59□□□□□ -0.07
RN7SL655P-201ENST00000486087 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
RN7SL655P-201ENST00000486087 DCAF1Q9Y4B6 1507 aa14.39□□□□□ -0.11
RN7SL655P-201ENST00000486087 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
RN7SL655P-201ENST00000486087 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
RN7SL655P-201ENST00000486087 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
RN7SL655P-201ENST00000486087 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
RN7SL655P-201ENST00000486087 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
RN7SL655P-201ENST00000486087 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
RN7SL655P-201ENST00000486087 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
RN7SL655P-201ENST00000486087 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
RN7SL655P-201ENST00000486087 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
RN7SL655P-201ENST00000486087 NESP48681 1621 aa13.63□□□□□ -0.23
RN7SL655P-201ENST00000486087 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
RN7SL655P-201ENST00000486087 CUX2O14529 1486 aa13.6□□□□□ -0.23
RN7SL655P-201ENST00000486087 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
RN7SL655P-201ENST00000486087 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
RN7SL655P-201ENST00000486087 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
RN7SL655P-201ENST00000486087 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
RN7SL655P-201ENST00000486087 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
RN7SL655P-201ENST00000486087 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
RN7SL655P-201ENST00000486087 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
RN7SL655P-201ENST00000486087 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
RN7SL655P-201ENST00000486087 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
RN7SL655P-201ENST00000486087 WIZO95785 1651 aa13.35□□□□□ -0.27
RN7SL655P-201ENST00000486087 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
RN7SL655P-201ENST00000486087 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
RN7SL655P-201ENST00000486087 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
RN7SL655P-201ENST00000486087 WDR62O43379 1518 aa13.22□□□□□ -0.29
RN7SL655P-201ENST00000486087 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
RN7SL655P-201ENST00000486087 CFTRP13569 1480 aa13.16□□□□□ -0.3
RN7SL655P-201ENST00000486087 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
RN7SL655P-201ENST00000486087 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
RN7SL655P-201ENST00000486087 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
RN7SL655P-201ENST00000486087 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
RN7SL655P-201ENST00000486087 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
RN7SL655P-201ENST00000486087 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
RN7SL655P-201ENST00000486087 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
RN7SL655P-201ENST00000486087 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
RN7SL655P-201ENST00000486087 PRDM2Q13029 1718 aa12.95□□□□□ -0.34
RN7SL655P-201ENST00000486087 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
RN7SL655P-201ENST00000486087 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
RN7SL655P-201ENST00000486087 RIMBP3CA6NJZ7 1639 aa12.86□□□□□ -0.35
RN7SL655P-201ENST00000486087 RIMBP3BA6NNM3 1639 aa12.86□□□□□ -0.35
RN7SL655P-201ENST00000486087 RIMBP3Q9UFD9 1639 aa12.86□□□□□ -0.35
RN7SL655P-201ENST00000486087 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
RN7SL655P-201ENST00000486087 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
RN7SL655P-201ENST00000486087 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
RN7SL655P-201ENST00000486087 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
RN7SL655P-201ENST00000486087 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
RN7SL655P-201ENST00000486087 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
RN7SL655P-201ENST00000486087 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
RN7SL655P-201ENST00000486087 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
RN7SL655P-201ENST00000486087 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
RN7SL655P-201ENST00000486087 CHD1O14646 1710 aa12.76□□□□□ -0.37
RN7SL655P-201ENST00000486087 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
RN7SL655P-201ENST00000486087 FBLN2P98095 1184 aa12.74□□□□□ -0.37
RN7SL655P-201ENST00000486087 SOGA1O94964 1423 aa12.72□□□□□ -0.37
RN7SL655P-201ENST00000486087 CUX1P39880 1505 aa12.7□□□□□ -0.38
RN7SL655P-201ENST00000486087 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
RN7SL655P-201ENST00000486087 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
RN7SL655P-201ENST00000486087 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
RN7SL655P-201ENST00000486087 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
RN7SL655P-201ENST00000486087 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
RN7SL655P-201ENST00000486087 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
RN7SL655P-201ENST00000486087 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
RN7SL655P-201ENST00000486087 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
RN7SL655P-201ENST00000486087 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
RN7SL655P-201ENST00000486087 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
RN7SL655P-201ENST00000486087 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
RN7SL655P-201ENST00000486087 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
RN7SL655P-201ENST00000486087 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
RN7SL655P-201ENST00000486087 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
RN7SL655P-201ENST00000486087 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.4
RN7SL655P-201ENST00000486087 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
RN7SL655P-201ENST00000486087 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
RN7SL655P-201ENST00000486087 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
RN7SL655P-201ENST00000486087 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
RN7SL655P-201ENST00000486087 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
RN7SL655P-201ENST00000486087 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
RN7SL655P-201ENST00000486087 BIVM-ERCC5R4GMW8 1640 aa12.42□□□□□ -0.42
RN7SL655P-201ENST00000486087 NUP160Q12769 1436 aa12.42□□□□□ -0.42
RN7SL655P-201ENST00000486087 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
RN7SL655P-201ENST00000486087 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
RN7SL655P-201ENST00000486087 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
RN7SL655P-201ENST00000486087 ERICH3Q5RHP9 1530 aa12.34□□□□□ -0.43
RN7SL655P-201ENST00000486087 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
RN7SL655P-201ENST00000486087 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
RN7SL655P-201ENST00000486087 KIF13AQ9H1H9 1805 aa12.26□□□□□ -0.45
RN7SL655P-201ENST00000486087 IGF1RP08069 1367 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms