RNA–Protein interactions for RNA: ENST00000486055.1

KCNIP3-207, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 3

Gene KCNIP3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-207ENST00000486055 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
KCNIP3-207ENST00000486055 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
KCNIP3-207ENST00000486055 ABCC9O60706 1549 aa30.31■■■□□ 2.44
KCNIP3-207ENST00000486055 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
KCNIP3-207ENST00000486055 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
KCNIP3-207ENST00000486055 NACADO15069 1562 aa28.92■■■□□ 2.22
KCNIP3-207ENST00000486055 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
KCNIP3-207ENST00000486055 ZCCHC6Q5VYS8 1495 aaKnown RBP28.66■■■□□ 2.18
KCNIP3-207ENST00000486055 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.15
KCNIP3-207ENST00000486055 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
KCNIP3-207ENST00000486055 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
KCNIP3-207ENST00000486055 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
KCNIP3-207ENST00000486055 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
KCNIP3-207ENST00000486055 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
KCNIP3-207ENST00000486055 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
KCNIP3-207ENST00000486055 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
KCNIP3-207ENST00000486055 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
KCNIP3-207ENST00000486055 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
KCNIP3-207ENST00000486055 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
KCNIP3-207ENST00000486055 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
KCNIP3-207ENST00000486055 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
KCNIP3-207ENST00000486055 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
KCNIP3-207ENST00000486055 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
KCNIP3-207ENST00000486055 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
KCNIP3-207ENST00000486055 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
KCNIP3-207ENST00000486055 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
KCNIP3-207ENST00000486055 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
KCNIP3-207ENST00000486055 WIZO95785 1651 aa26.26■■□□□ 1.79
KCNIP3-207ENST00000486055 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
KCNIP3-207ENST00000486055 NESP48681 1621 aa26.2■■□□□ 1.78
KCNIP3-207ENST00000486055 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
KCNIP3-207ENST00000486055 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
KCNIP3-207ENST00000486055 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
KCNIP3-207ENST00000486055 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
KCNIP3-207ENST00000486055 CUX2O14529 1486 aa25.88■■□□□ 1.73
KCNIP3-207ENST00000486055 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
KCNIP3-207ENST00000486055 CFTRP13569 1480 aa25.77■■□□□ 1.72
KCNIP3-207ENST00000486055 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
KCNIP3-207ENST00000486055 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
KCNIP3-207ENST00000486055 CCDC88BA6NC98 1476 aa25.73■■□□□ 1.71
KCNIP3-207ENST00000486055 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
KCNIP3-207ENST00000486055 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
KCNIP3-207ENST00000486055 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
KCNIP3-207ENST00000486055 DNAJC5Q9H3Z4 198 aa25.54■■□□□ 1.68
KCNIP3-207ENST00000486055 WDR62O43379 1518 aa25.52■■□□□ 1.68
KCNIP3-207ENST00000486055 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
KCNIP3-207ENST00000486055 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
KCNIP3-207ENST00000486055 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
KCNIP3-207ENST00000486055 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
KCNIP3-207ENST00000486055 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
KCNIP3-207ENST00000486055 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
KCNIP3-207ENST00000486055 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
KCNIP3-207ENST00000486055 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
KCNIP3-207ENST00000486055 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
KCNIP3-207ENST00000486055 CUX1P39880 1505 aa24.96■■□□□ 1.59
KCNIP3-207ENST00000486055 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
KCNIP3-207ENST00000486055 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
KCNIP3-207ENST00000486055 SOGA1O94964 1423 aa24.92■■□□□ 1.58
KCNIP3-207ENST00000486055 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
KCNIP3-207ENST00000486055 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
KCNIP3-207ENST00000486055 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
KCNIP3-207ENST00000486055 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
KCNIP3-207ENST00000486055 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
KCNIP3-207ENST00000486055 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
KCNIP3-207ENST00000486055 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
KCNIP3-207ENST00000486055 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
KCNIP3-207ENST00000486055 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
KCNIP3-207ENST00000486055 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
KCNIP3-207ENST00000486055 FBLN2P98095 1184 aa24.6■■□□□ 1.53
KCNIP3-207ENST00000486055 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
KCNIP3-207ENST00000486055 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
KCNIP3-207ENST00000486055 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
KCNIP3-207ENST00000486055 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
KCNIP3-207ENST00000486055 CHD1O14646 1710 aa24.53■■□□□ 1.52
KCNIP3-207ENST00000486055 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
KCNIP3-207ENST00000486055 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
KCNIP3-207ENST00000486055 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
KCNIP3-207ENST00000486055 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
KCNIP3-207ENST00000486055 SYNJ2O15056 1496 aa24.45■■□□□ 1.5
KCNIP3-207ENST00000486055 PBRM1Q86U86 1689 aa24.41■■□□□ 1.5
KCNIP3-207ENST00000486055 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
KCNIP3-207ENST00000486055 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
KCNIP3-207ENST00000486055 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
KCNIP3-207ENST00000486055 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
KCNIP3-207ENST00000486055 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
KCNIP3-207ENST00000486055 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
KCNIP3-207ENST00000486055 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
KCNIP3-207ENST00000486055 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
KCNIP3-207ENST00000486055 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
KCNIP3-207ENST00000486055 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
KCNIP3-207ENST00000486055 IGF1RP08069 1367 aa24.25■■□□□ 1.47
KCNIP3-207ENST00000486055 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
KCNIP3-207ENST00000486055 NUP160Q12769 1436 aa24.21■■□□□ 1.47
KCNIP3-207ENST00000486055 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
KCNIP3-207ENST00000486055 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
KCNIP3-207ENST00000486055 JPH4Q96JJ6 628 aa24.05■■□□□ 1.44
KCNIP3-207ENST00000486055 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
KCNIP3-207ENST00000486055 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
KCNIP3-207ENST00000486055 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
KCNIP3-207ENST00000486055 SHROOM2Q13796 1616 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms