RNA–Protein interactions for RNA: ENST00000486038.1

TFAP2A-214, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-214ENST00000486038 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
TFAP2A-214ENST00000486038 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
TFAP2A-214ENST00000486038 ABCC9O60706 1549 aa34.62■■■■□ 3.13
TFAP2A-214ENST00000486038 RB1CC1Q8TDY2 1594 aa33.27■■■□□ 2.92
TFAP2A-214ENST00000486038 NACADO15069 1562 aa33.14■■■□□ 2.9
TFAP2A-214ENST00000486038 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
TFAP2A-214ENST00000486038 DCAF8L2P0C7V8 631 aa32.75■■■□□ 2.83
TFAP2A-214ENST00000486038 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
TFAP2A-214ENST00000486038 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
TFAP2A-214ENST00000486038 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
TFAP2A-214ENST00000486038 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
TFAP2A-214ENST00000486038 PABPN1Q86U42 306 aaKnown RBP eCLIP32.18■■■□□ 2.74
TFAP2A-214ENST00000486038 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
TFAP2A-214ENST00000486038 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
TFAP2A-214ENST00000486038 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
TFAP2A-214ENST00000486038 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
TFAP2A-214ENST00000486038 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
TFAP2A-214ENST00000486038 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.58
TFAP2A-214ENST00000486038 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
TFAP2A-214ENST00000486038 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
TFAP2A-214ENST00000486038 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
TFAP2A-214ENST00000486038 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
TFAP2A-214ENST00000486038 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
TFAP2A-214ENST00000486038 HMGXB3Q12766 1538 aa30.41■■■□□ 2.46
TFAP2A-214ENST00000486038 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.45
TFAP2A-214ENST00000486038 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
TFAP2A-214ENST00000486038 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
TFAP2A-214ENST00000486038 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
TFAP2A-214ENST00000486038 WIZO95785 1651 aa29.88■■■□□ 2.37
TFAP2A-214ENST00000486038 LAMC3Q9Y6N6 1575 aa29.85■■■□□ 2.37
TFAP2A-214ENST00000486038 NESP48681 1621 aa29.83■■■□□ 2.37
TFAP2A-214ENST00000486038 CUX2O14529 1486 aa29.82■■■□□ 2.36
TFAP2A-214ENST00000486038 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
TFAP2A-214ENST00000486038 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
TFAP2A-214ENST00000486038 PDS5BQ9NTI5 1447 aa29.6■■■□□ 2.33
TFAP2A-214ENST00000486038 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
TFAP2A-214ENST00000486038 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
TFAP2A-214ENST00000486038 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
TFAP2A-214ENST00000486038 CFTRP13569 1480 aa29.35■■■□□ 2.29
TFAP2A-214ENST00000486038 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
TFAP2A-214ENST00000486038 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
TFAP2A-214ENST00000486038 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
TFAP2A-214ENST00000486038 WDR62O43379 1518 aa29.27■■■□□ 2.28
TFAP2A-214ENST00000486038 DNAJC5Q9H3Z4 198 aa29.26■■■□□ 2.27
TFAP2A-214ENST00000486038 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
TFAP2A-214ENST00000486038 CCDC88BA6NC98 1476 aa29.15■■■□□ 2.26
TFAP2A-214ENST00000486038 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
TFAP2A-214ENST00000486038 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
TFAP2A-214ENST00000486038 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
TFAP2A-214ENST00000486038 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
TFAP2A-214ENST00000486038 IFT140Q96RY7 1462 aa28.69■■■□□ 2.18
TFAP2A-214ENST00000486038 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
TFAP2A-214ENST00000486038 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
TFAP2A-214ENST00000486038 TARBP1Q13395 1621 aaKnown RBP28.5■■■□□ 2.15
TFAP2A-214ENST00000486038 EIF4G3O43432 1585 aaKnown RBP28.49■■■□□ 2.15
TFAP2A-214ENST00000486038 POLA1P09884 1462 aaPredicted RBP28.47■■■□□ 2.15
TFAP2A-214ENST00000486038 OSCARQ8IYS5 282 aa28.4■■■□□ 2.14
TFAP2A-214ENST00000486038 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
TFAP2A-214ENST00000486038 CUX1P39880 1505 aa28.36■■■□□ 2.13
TFAP2A-214ENST00000486038 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
TFAP2A-214ENST00000486038 SOGA1O94964 1423 aa28.31■■■□□ 2.12
TFAP2A-214ENST00000486038 AQRO60306 1485 aaKnown RBP eCLIP28.28■■■□□ 2.12
TFAP2A-214ENST00000486038 RAD54L2Q9Y4B4 1467 aa28.28■■■□□ 2.12
TFAP2A-214ENST00000486038 CHD1O14646 1710 aa28.24■■■□□ 2.11
TFAP2A-214ENST00000486038 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
TFAP2A-214ENST00000486038 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
TFAP2A-214ENST00000486038 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
TFAP2A-214ENST00000486038 PBRM1Q86U86 1689 aa28.09■■■□□ 2.09
TFAP2A-214ENST00000486038 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
TFAP2A-214ENST00000486038 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
TFAP2A-214ENST00000486038 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
TFAP2A-214ENST00000486038 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
TFAP2A-214ENST00000486038 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
TFAP2A-214ENST00000486038 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
TFAP2A-214ENST00000486038 SNAPC4Q5SXM2 1469 aa28.07■■■□□ 2.08
TFAP2A-214ENST00000486038 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
TFAP2A-214ENST00000486038 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
TFAP2A-214ENST00000486038 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
TFAP2A-214ENST00000486038 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
TFAP2A-214ENST00000486038 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
TFAP2A-214ENST00000486038 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
TFAP2A-214ENST00000486038 FBLN2P98095 1184 aa27.98■■■□□ 2.07
TFAP2A-214ENST00000486038 SYNJ2O15056 1496 aa27.95■■■□□ 2.07
TFAP2A-214ENST00000486038 CHMP7Q8WUX9 453 aaPredicted RBP27.89■■■□□ 2.06
TFAP2A-214ENST00000486038 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
TFAP2A-214ENST00000486038 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
TFAP2A-214ENST00000486038 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
TFAP2A-214ENST00000486038 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
TFAP2A-214ENST00000486038 GRIN2AQ12879 1464 aa27.72■■■□□ 2.03
TFAP2A-214ENST00000486038 FHAD1B1AJZ9 1412 aa27.68■■■□□ 2.02
TFAP2A-214ENST00000486038 CYB5RLQ6IPT4 315 aa27.65■■■□□ 2.02
TFAP2A-214ENST00000486038 NUP160Q12769 1436 aa27.61■■■□□ 2.01
TFAP2A-214ENST00000486038 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
TFAP2A-214ENST00000486038 SHROOM2Q13796 1616 aa27.52■■■□□ 2
TFAP2A-214ENST00000486038 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
TFAP2A-214ENST00000486038 CUL7Q14999 1698 aa27.49■■□□□ 1.99
TFAP2A-214ENST00000486038 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
TFAP2A-214ENST00000486038 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
TFAP2A-214ENST00000486038 IGF1RP08069 1367 aa27.36■■□□□ 1.97
TFAP2A-214ENST00000486038 PRG4Q92954 1404 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms