RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
TPM2-206ENST00000486018 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
TPM2-206ENST00000486018 ABCC9O60706 1549 aa32.94■■■□□ 2.86
TPM2-206ENST00000486018 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
TPM2-206ENST00000486018 RB1CC1Q8TDY2 1594 aa31.2■■■□□ 2.58
TPM2-206ENST00000486018 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
TPM2-206ENST00000486018 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
TPM2-206ENST00000486018 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
TPM2-206ENST00000486018 NACADO15069 1562 aa31.08■■■□□ 2.57
TPM2-206ENST00000486018 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
TPM2-206ENST00000486018 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.518e-7■■■□□ 17.2
TPM2-206ENST00000486018 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
TPM2-206ENST00000486018 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
TPM2-206ENST00000486018 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
TPM2-206ENST00000486018 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
TPM2-206ENST00000486018 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
TPM2-206ENST00000486018 CECR2Q9BXF3 1484 aa29.64■■■□□ 2.34
TPM2-206ENST00000486018 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
TPM2-206ENST00000486018 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
TPM2-206ENST00000486018 SMARCA4P51532 1647 aa29.01■■■□□ 2.23
TPM2-206ENST00000486018 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
TPM2-206ENST00000486018 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
TPM2-206ENST00000486018 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
TPM2-206ENST00000486018 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
TPM2-206ENST00000486018 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
TPM2-206ENST00000486018 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
TPM2-206ENST00000486018 WIZO95785 1651 aa28.6■■■□□ 2.17
TPM2-206ENST00000486018 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
TPM2-206ENST00000486018 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
TPM2-206ENST00000486018 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
TPM2-206ENST00000486018 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
TPM2-206ENST00000486018 CUX2O14529 1486 aa28.36■■■□□ 2.13
TPM2-206ENST00000486018 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
TPM2-206ENST00000486018 NESP48681 1621 aa28.3■■■□□ 2.12
TPM2-206ENST00000486018 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
TPM2-206ENST00000486018 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
TPM2-206ENST00000486018 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.07
TPM2-206ENST00000486018 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
TPM2-206ENST00000486018 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
TPM2-206ENST00000486018 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
TPM2-206ENST00000486018 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
TPM2-206ENST00000486018 CFTRP13569 1480 aa27.82■■■□□ 2.04
TPM2-206ENST00000486018 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
TPM2-206ENST00000486018 PRDM2Q13029 1718 aa27.55■■■□□ 2
TPM2-206ENST00000486018 WDR62O43379 1518 aa27.51■■■□□ 2
TPM2-206ENST00000486018 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
TPM2-206ENST00000486018 CEP164Q9UPV0 1460 aa27.47■■□□□ 1.99
TPM2-206ENST00000486018 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
TPM2-206ENST00000486018 TRIM41Q8WV44 630 aa27.25■■□□□ 1.95
TPM2-206ENST00000486018 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
TPM2-206ENST00000486018 TOPBP1Q92547 1522 aa27.14■■□□□ 1.94
TPM2-206ENST00000486018 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
TPM2-206ENST00000486018 CUX1P39880 1505 aa27.11■■□□□ 1.93
TPM2-206ENST00000486018 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
TPM2-206ENST00000486018 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
TPM2-206ENST00000486018 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
TPM2-206ENST00000486018 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
TPM2-206ENST00000486018 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
TPM2-206ENST00000486018 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
TPM2-206ENST00000486018 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
TPM2-206ENST00000486018 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
TPM2-206ENST00000486018 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
TPM2-206ENST00000486018 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
TPM2-206ENST00000486018 SOGA1O94964 1423 aa26.81■■□□□ 1.88
TPM2-206ENST00000486018 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
TPM2-206ENST00000486018 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.87
TPM2-206ENST00000486018 EIF4G3O43432 1585 aaKnown RBP26.73■■□□□ 1.87
TPM2-206ENST00000486018 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
TPM2-206ENST00000486018 RIMBP3CA6NJZ7 1639 aa26.71■■□□□ 1.87
TPM2-206ENST00000486018 RIMBP3BA6NNM3 1639 aa26.71■■□□□ 1.87
TPM2-206ENST00000486018 RIMBP3Q9UFD9 1639 aa26.71■■□□□ 1.87
TPM2-206ENST00000486018 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
TPM2-206ENST00000486018 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
TPM2-206ENST00000486018 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
TPM2-206ENST00000486018 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
TPM2-206ENST00000486018 FBLN2P98095 1184 aa26.6■■□□□ 1.85
TPM2-206ENST00000486018 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
TPM2-206ENST00000486018 CHD1O14646 1710 aa26.56■■□□□ 1.84
TPM2-206ENST00000486018 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
TPM2-206ENST00000486018 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
TPM2-206ENST00000486018 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
TPM2-206ENST00000486018 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
TPM2-206ENST00000486018 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
TPM2-206ENST00000486018 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
TPM2-206ENST00000486018 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
TPM2-206ENST00000486018 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
TPM2-206ENST00000486018 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
TPM2-206ENST00000486018 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
TPM2-206ENST00000486018 IGF1RP08069 1367 aa26.35■■□□□ 1.81
TPM2-206ENST00000486018 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
TPM2-206ENST00000486018 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
TPM2-206ENST00000486018 CLASP1Q7Z460 1538 aa26.25■■□□□ 1.79
TPM2-206ENST00000486018 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
TPM2-206ENST00000486018 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
TPM2-206ENST00000486018 EEA1Q15075 1411 aa26.23■■□□□ 1.79
TPM2-206ENST00000486018 TRHP20396 242 aaPredicted RBP26.23■■□□□ 1.79
TPM2-206ENST00000486018 CUL7Q14999 1698 aa26.19■■□□□ 1.78
TPM2-206ENST00000486018 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
TPM2-206ENST00000486018 CSRNP3Q8WYN3 585 aa26.14■■□□□ 1.78
TPM2-206ENST00000486018 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms