RNA–Protein interactions for RNA: ENST00000486010.1

MAGED4B-208, Transcript of MAGE family member D4B, humanhuman

TSL 3

Gene MAGED4B, Length 889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAGED4B-208ENST00000486010 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
MAGED4B-208ENST00000486010 CCDC180Q9P1Z9 1646 aa37.74■■■■□ 3.63
MAGED4B-208ENST00000486010 ABCC9O60706 1549 aa37.68■■■■□ 3.62
MAGED4B-208ENST00000486010 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
MAGED4B-208ENST00000486010 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
MAGED4B-208ENST00000486010 NACADO15069 1562 aa35.63■■■■□ 3.29
MAGED4B-208ENST00000486010 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
MAGED4B-208ENST00000486010 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
MAGED4B-208ENST00000486010 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
MAGED4B-208ENST00000486010 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
MAGED4B-208ENST00000486010 ZCCHC6Q5VYS8 1495 aaKnown RBP34.94■■■■□ 3.18
MAGED4B-208ENST00000486010 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
MAGED4B-208ENST00000486010 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
MAGED4B-208ENST00000486010 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
MAGED4B-208ENST00000486010 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
MAGED4B-208ENST00000486010 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
MAGED4B-208ENST00000486010 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
MAGED4B-208ENST00000486010 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
MAGED4B-208ENST00000486010 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
MAGED4B-208ENST00000486010 SMARCA4P51532 1647 aa32.87■■■□□ 2.85
MAGED4B-208ENST00000486010 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
MAGED4B-208ENST00000486010 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
MAGED4B-208ENST00000486010 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
MAGED4B-208ENST00000486010 HMGXB3Q12766 1538 aa32.65■■■□□ 2.82
MAGED4B-208ENST00000486010 BAZ1BQ9UIG0 1483 aaKnown RBP32.53■■■□□ 2.8
MAGED4B-208ENST00000486010 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
MAGED4B-208ENST00000486010 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
MAGED4B-208ENST00000486010 ERCC6Q03468 1493 aa32.47■■■□□ 2.79
MAGED4B-208ENST00000486010 NESP48681 1621 aa32.44■■■□□ 2.78
MAGED4B-208ENST00000486010 CUX2O14529 1486 aa32.31■■■□□ 2.76
MAGED4B-208ENST00000486010 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
MAGED4B-208ENST00000486010 WIZO95785 1651 aa32.18■■■□□ 2.74
MAGED4B-208ENST00000486010 LAMC3Q9Y6N6 1575 aa32.14■■■□□ 2.74
MAGED4B-208ENST00000486010 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
MAGED4B-208ENST00000486010 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
MAGED4B-208ENST00000486010 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
MAGED4B-208ENST00000486010 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
MAGED4B-208ENST00000486010 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
MAGED4B-208ENST00000486010 TOP2AP11388 1531 aaKnown RBP31.69■■■□□ 2.66
MAGED4B-208ENST00000486010 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
MAGED4B-208ENST00000486010 WDR62O43379 1518 aa31.59■■■□□ 2.65
MAGED4B-208ENST00000486010 CFTRP13569 1480 aa31.58■■■□□ 2.65
MAGED4B-208ENST00000486010 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
MAGED4B-208ENST00000486010 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
MAGED4B-208ENST00000486010 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
MAGED4B-208ENST00000486010 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
MAGED4B-208ENST00000486010 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
MAGED4B-208ENST00000486010 TOPBP1Q92547 1522 aa31■■■□□ 2.55
MAGED4B-208ENST00000486010 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
MAGED4B-208ENST00000486010 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
MAGED4B-208ENST00000486010 IFT140Q96RY7 1462 aa30.91■■■□□ 2.54
MAGED4B-208ENST00000486010 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
MAGED4B-208ENST00000486010 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
MAGED4B-208ENST00000486010 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
MAGED4B-208ENST00000486010 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
MAGED4B-208ENST00000486010 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
MAGED4B-208ENST00000486010 POLA1P09884 1462 aaPredicted RBP30.69■■■□□ 2.5
MAGED4B-208ENST00000486010 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.5
MAGED4B-208ENST00000486010 SUPT5HO00267 1087 aaKnown RBP30.66■■■□□ 2.5
MAGED4B-208ENST00000486010 RAD54L2Q9Y4B4 1467 aa30.63■■■□□ 2.49
MAGED4B-208ENST00000486010 CHD1O14646 1710 aa30.56■■■□□ 2.48
MAGED4B-208ENST00000486010 SOGA1O94964 1423 aa30.56■■■□□ 2.48
MAGED4B-208ENST00000486010 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
MAGED4B-208ENST00000486010 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
MAGED4B-208ENST00000486010 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
MAGED4B-208ENST00000486010 CUX1P39880 1505 aa30.54■■■□□ 2.48
MAGED4B-208ENST00000486010 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
MAGED4B-208ENST00000486010 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
MAGED4B-208ENST00000486010 FBLN2P98095 1184 aa30.47■■■□□ 2.47
MAGED4B-208ENST00000486010 ARHGEF11O15085 1522 aa30.42■■■□□ 2.46
MAGED4B-208ENST00000486010 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
MAGED4B-208ENST00000486010 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
MAGED4B-208ENST00000486010 CYB5RLQ6IPT4 315 aa30.24■■■□□ 2.43
MAGED4B-208ENST00000486010 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
MAGED4B-208ENST00000486010 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
MAGED4B-208ENST00000486010 CHMP7Q8WUX9 453 aaPredicted RBP30.21■■■□□ 2.43
MAGED4B-208ENST00000486010 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
MAGED4B-208ENST00000486010 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
MAGED4B-208ENST00000486010 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
MAGED4B-208ENST00000486010 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
MAGED4B-208ENST00000486010 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
MAGED4B-208ENST00000486010 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
MAGED4B-208ENST00000486010 CLASP1Q7Z460 1538 aa30.12■■■□□ 2.41
MAGED4B-208ENST00000486010 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
MAGED4B-208ENST00000486010 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
MAGED4B-208ENST00000486010 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
MAGED4B-208ENST00000486010 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
MAGED4B-208ENST00000486010 ADAMTS12P58397 1594 aa29.88■■■□□ 2.37
MAGED4B-208ENST00000486010 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
MAGED4B-208ENST00000486010 TRHP20396 242 aaPredicted RBP29.85■■■□□ 2.37
MAGED4B-208ENST00000486010 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
MAGED4B-208ENST00000486010 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
MAGED4B-208ENST00000486010 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.36
MAGED4B-208ENST00000486010 ERCC6L2Q5T890 1561 aa29.75■■■□□ 2.35
MAGED4B-208ENST00000486010 NUP160Q12769 1436 aa29.74■■■□□ 2.35
MAGED4B-208ENST00000486010 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
MAGED4B-208ENST00000486010 PRG4Q92954 1404 aaPredicted RBP29.48■■■□□ 2.31
MAGED4B-208ENST00000486010 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
MAGED4B-208ENST00000486010 IGF1RP08069 1367 aa29.46■■■□□ 2.31
MAGED4B-208ENST00000486010 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms