RNA–Protein interactions for RNA: ENST00000485957.1

MECOM-213, Transcript of MDS1 and EVI1 complex locus, humanhuman

TSL 1 (best)

Gene MECOM, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECOM-213ENST00000485957 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
MECOM-213ENST00000485957 ABCC9O60706 1549 aa39.58■■■■□ 3.93
MECOM-213ENST00000485957 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
MECOM-213ENST00000485957 RB1CC1Q8TDY2 1594 aa37.61■■■■□ 3.61
MECOM-213ENST00000485957 DCAF8L2P0C7V8 631 aa37.41■■■■□ 3.58
MECOM-213ENST00000485957 NACADO15069 1562 aa37.36■■■■□ 3.57
MECOM-213ENST00000485957 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
MECOM-213ENST00000485957 PABPN1Q86U42 306 aaKnown RBP eCLIP36.91■■■■□ 3.5
MECOM-213ENST00000485957 MYO15BQ96JP2 1530 aa36.83■■■■□ 3.49
MECOM-213ENST00000485957 UNC13AQ9UPW8 1703 aa36.78■■■■□ 3.48
MECOM-213ENST00000485957 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
MECOM-213ENST00000485957 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
MECOM-213ENST00000485957 DCAF1Q9Y4B6 1507 aa36.44■■■■□ 3.42
MECOM-213ENST00000485957 SCRIBQ14160 1630 aa36.2■■■■□ 3.39
MECOM-213ENST00000485957 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
MECOM-213ENST00000485957 CC2D2AQ9P2K1 1620 aa35.69■■■■□ 3.3
MECOM-213ENST00000485957 EIF4G1Q04637 1599 aaKnown RBP35.64■■■■□ 3.3
MECOM-213ENST00000485957 CECR2Q9BXF3 1484 aa35.58■■■■□ 3.29
MECOM-213ENST00000485957 NCAPD3P42695 1498 aa34.51■■■■□ 3.11
MECOM-213ENST00000485957 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
MECOM-213ENST00000485957 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
MECOM-213ENST00000485957 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
MECOM-213ENST00000485957 BAZ1AQ9NRL2 1556 aaPredicted RBP34.29■■■■□ 3.08
MECOM-213ENST00000485957 HMGXB3Q12766 1538 aa34.26■■■■□ 3.08
MECOM-213ENST00000485957 BAZ1BQ9UIG0 1483 aaKnown RBP34.16■■■■□ 3.06
MECOM-213ENST00000485957 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
MECOM-213ENST00000485957 ERCC6Q03468 1493 aa34.12■■■■□ 3.05
MECOM-213ENST00000485957 PEG3Q9GZU2 1588 aa34.06■■■■□ 3.04
MECOM-213ENST00000485957 NESP48681 1621 aa34.05■■■■□ 3.04
MECOM-213ENST00000485957 CUX2O14529 1486 aa33.92■■■■□ 3.02
MECOM-213ENST00000485957 DNAJC5Q9H3Z4 198 aa33.77■■■■□ 3
MECOM-213ENST00000485957 WIZO95785 1651 aa33.74■■■□□ 2.99
MECOM-213ENST00000485957 LAMC3Q9Y6N6 1575 aa33.69■■■□□ 2.98
MECOM-213ENST00000485957 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
MECOM-213ENST00000485957 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
MECOM-213ENST00000485957 PDS5BQ9NTI5 1447 aa33.52■■■□□ 2.96
MECOM-213ENST00000485957 CADPSQ9ULU8 1353 aa33.5■■■□□ 2.95
MECOM-213ENST00000485957 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
MECOM-213ENST00000485957 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
MECOM-213ENST00000485957 MRC2Q9UBG0 1479 aa33.26■■■□□ 2.92
MECOM-213ENST00000485957 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
MECOM-213ENST00000485957 FANCD2Q9BXW9 1451 aa33.16■■■□□ 2.9
MECOM-213ENST00000485957 WDR62O43379 1518 aa33.15■■■□□ 2.9
MECOM-213ENST00000485957 CFTRP13569 1480 aa33.14■■■□□ 2.9
MECOM-213ENST00000485957 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
MECOM-213ENST00000485957 URB2Q14146 1524 aaKnown RBP32.89■■■□□ 2.86
MECOM-213ENST00000485957 PRDM2Q13029 1718 aa32.76■■■□□ 2.83
MECOM-213ENST00000485957 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
MECOM-213ENST00000485957 ZNF608Q9ULD9 1512 aaPredicted RBP32.5■■■□□ 2.79
MECOM-213ENST00000485957 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
MECOM-213ENST00000485957 IFT140Q96RY7 1462 aa32.47■■■□□ 2.79
MECOM-213ENST00000485957 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
MECOM-213ENST00000485957 DNMBPQ6XZF7 1577 aa32.41■■■□□ 2.78
MECOM-213ENST00000485957 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
MECOM-213ENST00000485957 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
MECOM-213ENST00000485957 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
MECOM-213ENST00000485957 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
MECOM-213ENST00000485957 AQRO60306 1485 aaKnown RBP eCLIP32.22■■■□□ 2.75
MECOM-213ENST00000485957 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
MECOM-213ENST00000485957 RAD54L2Q9Y4B4 1467 aa32.16■■■□□ 2.74
MECOM-213ENST00000485957 SOGA1O94964 1423 aa32.08■■■□□ 2.73
MECOM-213ENST00000485957 CUX1P39880 1505 aa32.06■■■□□ 2.72
MECOM-213ENST00000485957 FGD5Q6ZNL6 1462 aa32.06■■■□□ 2.72
MECOM-213ENST00000485957 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
MECOM-213ENST00000485957 RIMBP3CA6NJZ7 1639 aa32.03■■■□□ 2.72
MECOM-213ENST00000485957 RIMBP3BA6NNM3 1639 aa32.03■■■□□ 2.72
MECOM-213ENST00000485957 RIMBP3Q9UFD9 1639 aa32.03■■■□□ 2.72
MECOM-213ENST00000485957 FBLN2P98095 1184 aa32.01■■■□□ 2.71
MECOM-213ENST00000485957 CHD1O14646 1710 aa32■■■□□ 2.71
MECOM-213ENST00000485957 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
MECOM-213ENST00000485957 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
MECOM-213ENST00000485957 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
MECOM-213ENST00000485957 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
MECOM-213ENST00000485957 CYB5RLQ6IPT4 315 aa31.74■■■□□ 2.67
MECOM-213ENST00000485957 CHMP7Q8WUX9 453 aaPredicted RBP31.73■■■□□ 2.67
MECOM-213ENST00000485957 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
MECOM-213ENST00000485957 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
MECOM-213ENST00000485957 ARAP1Q96P48 1450 aa31.66■■■□□ 2.66
MECOM-213ENST00000485957 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
MECOM-213ENST00000485957 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
MECOM-213ENST00000485957 SYNJ2O15056 1496 aa31.63■■■□□ 2.65
MECOM-213ENST00000485957 CLASP1Q7Z460 1538 aa31.62■■■□□ 2.65
MECOM-213ENST00000485957 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
MECOM-213ENST00000485957 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
MECOM-213ENST00000485957 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.64
MECOM-213ENST00000485957 TOP2BQ02880 1626 aa31.53■■■□□ 2.64
MECOM-213ENST00000485957 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
MECOM-213ENST00000485957 ADAMTS12P58397 1594 aa31.38■■■□□ 2.61
MECOM-213ENST00000485957 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
MECOM-213ENST00000485957 TRHP20396 242 aaPredicted RBP31.35■■■□□ 2.61
MECOM-213ENST00000485957 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
MECOM-213ENST00000485957 FHAD1B1AJZ9 1412 aa31.27■■■□□ 2.6
MECOM-213ENST00000485957 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
MECOM-213ENST00000485957 NUP160Q12769 1436 aa31.24■■■□□ 2.59
MECOM-213ENST00000485957 ERCC6L2Q5T890 1561 aa31.23■■■□□ 2.59
MECOM-213ENST00000485957 SHROOM2Q13796 1616 aa31.06■■■□□ 2.56
MECOM-213ENST00000485957 PRG4Q92954 1404 aaPredicted RBP30.97■■■□□ 2.55
MECOM-213ENST00000485957 JPH4Q96JJ6 628 aa30.94■■■□□ 2.54
MECOM-213ENST00000485957 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
MECOM-213ENST00000485957 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms