RNA–Protein interactions for RNA: ENST00000485743.1

HBB-204, Transcript of hemoglobin subunit beta, humanhuman

TSL 1 (best)

Gene HBB, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-204ENST00000485743 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
HBB-204ENST00000485743 ABCC9O60706 1549 aa32.53■■■□□ 2.8
HBB-204ENST00000485743 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
HBB-204ENST00000485743 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
HBB-204ENST00000485743 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
HBB-204ENST00000485743 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
HBB-204ENST00000485743 NACADO15069 1562 aa30.07■■■□□ 2.4
HBB-204ENST00000485743 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
HBB-204ENST00000485743 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
HBB-204ENST00000485743 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
HBB-204ENST00000485743 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
HBB-204ENST00000485743 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
HBB-204ENST00000485743 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
HBB-204ENST00000485743 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
HBB-204ENST00000485743 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
HBB-204ENST00000485743 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
HBB-204ENST00000485743 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
HBB-204ENST00000485743 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
HBB-204ENST00000485743 ZCCHC6Q5VYS8 1495 aaKnown RBP28.55■■■□□ 2.16
HBB-204ENST00000485743 CUX2O14529 1486 aa28.42■■■□□ 2.14
HBB-204ENST00000485743 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
HBB-204ENST00000485743 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
HBB-204ENST00000485743 NCAPD3P42695 1498 aa27.78■■■□□ 2.04
HBB-204ENST00000485743 NESP48681 1621 aa27.69■■■□□ 2.02
HBB-204ENST00000485743 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
HBB-204ENST00000485743 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
HBB-204ENST00000485743 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
HBB-204ENST00000485743 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
HBB-204ENST00000485743 KIF21AQ7Z4S6 1674 aa27.32■■□□□ 1.96
HBB-204ENST00000485743 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
HBB-204ENST00000485743 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
HBB-204ENST00000485743 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
HBB-204ENST00000485743 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
HBB-204ENST00000485743 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
HBB-204ENST00000485743 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
HBB-204ENST00000485743 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
HBB-204ENST00000485743 WDR62O43379 1518 aa26.99■■□□□ 1.91
HBB-204ENST00000485743 OSCARQ8IYS5 282 aa26.95■■□□□ 1.9
HBB-204ENST00000485743 CADPSQ9ULU8 1353 aa26.87■■□□□ 1.89
HBB-204ENST00000485743 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
HBB-204ENST00000485743 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
HBB-204ENST00000485743 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
HBB-204ENST00000485743 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
HBB-204ENST00000485743 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
HBB-204ENST00000485743 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
HBB-204ENST00000485743 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
HBB-204ENST00000485743 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.83
HBB-204ENST00000485743 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
HBB-204ENST00000485743 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
HBB-204ENST00000485743 WIZO95785 1651 aa26.4■■□□□ 1.82
HBB-204ENST00000485743 CFTRP13569 1480 aa26.38■■□□□ 1.81
HBB-204ENST00000485743 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
HBB-204ENST00000485743 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
HBB-204ENST00000485743 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
HBB-204ENST00000485743 IFT140Q96RY7 1462 aa26.19■■□□□ 1.78
HBB-204ENST00000485743 CHD1O14646 1710 aa26.11■■□□□ 1.77
HBB-204ENST00000485743 EIF4G3O43432 1585 aaKnown RBP26.09■■□□□ 1.77
HBB-204ENST00000485743 PRDM2Q13029 1718 aa26.08■■□□□ 1.76
HBB-204ENST00000485743 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
HBB-204ENST00000485743 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
HBB-204ENST00000485743 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
HBB-204ENST00000485743 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.74
HBB-204ENST00000485743 FBLN2P98095 1184 aa25.9■■□□□ 1.74
HBB-204ENST00000485743 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
HBB-204ENST00000485743 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
HBB-204ENST00000485743 DNMBPQ6XZF7 1577 aa25.79■■□□□ 1.72
HBB-204ENST00000485743 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
HBB-204ENST00000485743 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
HBB-204ENST00000485743 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
HBB-204ENST00000485743 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
HBB-204ENST00000485743 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
HBB-204ENST00000485743 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
HBB-204ENST00000485743 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
HBB-204ENST00000485743 CHMP7Q8WUX9 453 aaPredicted RBP25.55■■□□□ 1.68
HBB-204ENST00000485743 GAPVD1Q14C86 1478 aa25.54■■□□□ 1.68
HBB-204ENST00000485743 SOGA1O94964 1423 aa25.5■■□□□ 1.67
HBB-204ENST00000485743 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
HBB-204ENST00000485743 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
HBB-204ENST00000485743 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
HBB-204ENST00000485743 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
HBB-204ENST00000485743 GRIN2BQ13224 1484 aa25.39■■□□□ 1.65
HBB-204ENST00000485743 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
HBB-204ENST00000485743 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
HBB-204ENST00000485743 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
HBB-204ENST00000485743 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
HBB-204ENST00000485743 CUX1P39880 1505 aa25.18■■□□□ 1.62
HBB-204ENST00000485743 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
HBB-204ENST00000485743 KDM4FA0A1W2PPD8 638 aa25.15■■□□□ 1.62
HBB-204ENST00000485743 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
HBB-204ENST00000485743 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
HBB-204ENST00000485743 SHROOM2Q13796 1616 aa25.06■■□□□ 1.6
HBB-204ENST00000485743 NUP160Q12769 1436 aa25.03■■□□□ 1.6
HBB-204ENST00000485743 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
HBB-204ENST00000485743 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
HBB-204ENST00000485743 ABCC10Q5T3U5 1492 aa24.98■■□□□ 1.59
HBB-204ENST00000485743 KDM6BO15054 1643 aa24.94■■□□□ 1.58
HBB-204ENST00000485743 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
HBB-204ENST00000485743 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
HBB-204ENST00000485743 MAPKBP1O60336 1514 aa24.88■■□□□ 1.57
HBB-204ENST00000485743 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms