RNA–Protein interactions for RNA: ENST00000485692.1

GTF3C5-209, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-209ENST00000485692 NISCHQ9Y2I1 1504 aa52.08■■■■■ 5.93
GTF3C5-209ENST00000485692 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
GTF3C5-209ENST00000485692 ABCC9O60706 1549 aa46.33■■■■■ 5.01
GTF3C5-209ENST00000485692 RB1CC1Q8TDY2 1594 aa44.28■■■■■ 4.68
GTF3C5-209ENST00000485692 NACADO15069 1562 aa44.05■■■■■ 4.64
GTF3C5-209ENST00000485692 DCAF8L2P0C7V8 631 aa43.8■■■■■ 4.6
GTF3C5-209ENST00000485692 MYO15BQ96JP2 1530 aa43.55■■■■■ 4.56
GTF3C5-209ENST00000485692 UNC13AQ9UPW8 1703 aa43.22■■■■■ 4.51
GTF3C5-209ENST00000485692 ZCCHC6Q5VYS8 1495 aaKnown RBP43.22■■■■■ 4.51
GTF3C5-209ENST00000485692 DNAJC5BQ9UF47 199 aa43.18■■■■■ 4.5
GTF3C5-209ENST00000485692 PABPN1Q86U42 306 aaKnown RBP eCLIP43.16■■■■■ 4.5
GTF3C5-209ENST00000485692 DCAF1Q9Y4B6 1507 aa43.07■■■■■ 4.49
GTF3C5-209ENST00000485692 BICRAQ9NZM4 1560 aa42.93■■■■■ 4.46
GTF3C5-209ENST00000485692 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
GTF3C5-209ENST00000485692 SCRIBQ14160 1630 aa42.48■■■■■ 4.39
GTF3C5-209ENST00000485692 CC2D2AQ9P2K1 1620 aa41.89■■■■■ 4.3
GTF3C5-209ENST00000485692 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.29
GTF3C5-209ENST00000485692 CECR2Q9BXF3 1484 aa41.73■■■■■ 4.27
GTF3C5-209ENST00000485692 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
GTF3C5-209ENST00000485692 SMARCA4P51532 1647 aa40.57■■■■■ 4.09
GTF3C5-209ENST00000485692 ATAD2BQ9ULI0 1458 aa40.54■■■■■ 4.08
GTF3C5-209ENST00000485692 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
GTF3C5-209ENST00000485692 BAZ1AQ9NRL2 1556 aaPredicted RBP40.44■■■■■ 4.06
GTF3C5-209ENST00000485692 HMGXB3Q12766 1538 aa40.38■■■■■ 4.06
GTF3C5-209ENST00000485692 PEG3Q9GZU2 1588 aa40.2■■■■■ 4.03
GTF3C5-209ENST00000485692 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.02
GTF3C5-209ENST00000485692 MROH2BQ7Z745 1585 aa40.1■■■■■ 4.01
GTF3C5-209ENST00000485692 ERCC6Q03468 1493 aa40.03■■■■■ 4
GTF3C5-209ENST00000485692 CUX2O14529 1486 aa39.89■■■■□ 3.98
GTF3C5-209ENST00000485692 NESP48681 1621 aa39.87■■■■□ 3.97
GTF3C5-209ENST00000485692 LAMC3Q9Y6N6 1575 aa39.7■■■■□ 3.95
GTF3C5-209ENST00000485692 WIZO95785 1651 aa39.64■■■■□ 3.94
GTF3C5-209ENST00000485692 DNAJC5Q9H3Z4 198 aa39.52■■■■□ 3.92
GTF3C5-209ENST00000485692 PDS5BQ9NTI5 1447 aa39.47■■■■□ 3.91
GTF3C5-209ENST00000485692 THOC2Q8NI27 1593 aaKnown RBP39.44■■■■□ 3.9
GTF3C5-209ENST00000485692 CADPSQ9ULU8 1353 aa39.42■■■■□ 3.9
GTF3C5-209ENST00000485692 RSF1Q96T23 1441 aaPredicted RBP39.39■■■■□ 3.9
GTF3C5-209ENST00000485692 KIF21AQ7Z4S6 1674 aa39.38■■■■□ 3.89
GTF3C5-209ENST00000485692 TOP2AP11388 1531 aaKnown RBP39.19■■■■□ 3.86
GTF3C5-209ENST00000485692 MRC2Q9UBG0 1479 aa39.09■■■■□ 3.85
GTF3C5-209ENST00000485692 CFTRP13569 1480 aa39.03■■■■□ 3.84
GTF3C5-209ENST00000485692 CEP164Q9UPV0 1460 aa38.99■■■■□ 3.83
GTF3C5-209ENST00000485692 WDR62O43379 1518 aa38.99■■■■□ 3.83
GTF3C5-209ENST00000485692 FANCD2Q9BXW9 1451 aa38.97■■■■□ 3.83
GTF3C5-209ENST00000485692 CCDC88BA6NC98 1476 aa38.72■■■■□ 3.79
GTF3C5-209ENST00000485692 PRDM2Q13029 1718 aa38.66■■■■□ 3.78
GTF3C5-209ENST00000485692 URB2Q14146 1524 aaKnown RBP38.6■■■■□ 3.77
GTF3C5-209ENST00000485692 TOPBP1Q92547 1522 aa38.25■■■■□ 3.71
GTF3C5-209ENST00000485692 ABCC8Q09428 1581 aa38.24■■■■□ 3.71
GTF3C5-209ENST00000485692 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
GTF3C5-209ENST00000485692 DNMBPQ6XZF7 1577 aa38.15■■■■□ 3.7
GTF3C5-209ENST00000485692 OSCARQ8IYS5 282 aa38.09■■■■□ 3.69
GTF3C5-209ENST00000485692 ZNF608Q9ULD9 1512 aaPredicted RBP38.07■■■■□ 3.69
GTF3C5-209ENST00000485692 EIF4G3O43432 1585 aaKnown RBP37.91■■■■□ 3.66
GTF3C5-209ENST00000485692 TARBP1Q13395 1621 aaKnown RBP37.89■■■■□ 3.66
GTF3C5-209ENST00000485692 POLA1P09884 1462 aaPredicted RBP37.88■■■■□ 3.65
GTF3C5-209ENST00000485692 TRIM41Q8WV44 630 aa37.87■■■■□ 3.65
GTF3C5-209ENST00000485692 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
GTF3C5-209ENST00000485692 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.64
GTF3C5-209ENST00000485692 SOGA1O94964 1423 aa37.71■■■■□ 3.63
GTF3C5-209ENST00000485692 RAD54L2Q9Y4B4 1467 aa37.7■■■■□ 3.63
GTF3C5-209ENST00000485692 CUX1P39880 1505 aa37.67■■■■□ 3.62
GTF3C5-209ENST00000485692 FGD5Q6ZNL6 1462 aa37.67■■■■□ 3.62
GTF3C5-209ENST00000485692 WDR97A6NE52 1622 aa37.59■■■■□ 3.61
GTF3C5-209ENST00000485692 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
GTF3C5-209ENST00000485692 CHD1O14646 1710 aa37.56■■■■□ 3.6
GTF3C5-209ENST00000485692 RIMBP3CA6NJZ7 1639 aa37.54■■■■□ 3.6
GTF3C5-209ENST00000485692 RIMBP3BA6NNM3 1639 aa37.54■■■■□ 3.6
GTF3C5-209ENST00000485692 RIMBP3Q9UFD9 1639 aa37.54■■■■□ 3.6
GTF3C5-209ENST00000485692 FBLN2P98095 1184 aa37.47■■■■□ 3.59
GTF3C5-209ENST00000485692 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
GTF3C5-209ENST00000485692 SNAPC4Q5SXM2 1469 aa37.41■■■■□ 3.58
GTF3C5-209ENST00000485692 GRIN2BQ13224 1484 aa37.37■■■■□ 3.57
GTF3C5-209ENST00000485692 MAGI1Q96QZ7 1491 aaPredicted RBP37.36■■■■□ 3.57
GTF3C5-209ENST00000485692 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
GTF3C5-209ENST00000485692 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
GTF3C5-209ENST00000485692 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.56
GTF3C5-209ENST00000485692 PBRM1Q86U86 1689 aa37.22■■■■□ 3.55
GTF3C5-209ENST00000485692 SYNJ2O15056 1496 aa37.22■■■■□ 3.55
GTF3C5-209ENST00000485692 ABCA5Q8WWZ7 1642 aa37.2■■■■□ 3.55
GTF3C5-209ENST00000485692 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
GTF3C5-209ENST00000485692 SYNJ1O43426 1573 aa37.18■■■■□ 3.54
GTF3C5-209ENST00000485692 TOP2BQ02880 1626 aa37.17■■■■□ 3.54
GTF3C5-209ENST00000485692 BIVM-ERCC5R4GMW8 1640 aa37.17■■■■□ 3.54
GTF3C5-209ENST00000485692 CLASP1Q7Z460 1538 aa37.15■■■■□ 3.54
GTF3C5-209ENST00000485692 CYB5RLQ6IPT4 315 aa37.15■■■■□ 3.54
GTF3C5-209ENST00000485692 ARAP1Q96P48 1450 aa37.1■■■■□ 3.53
GTF3C5-209ENST00000485692 ADAMTS12P58397 1594 aa36.9■■■■□ 3.5
GTF3C5-209ENST00000485692 GRIN2AQ12879 1464 aa36.88■■■■□ 3.5
GTF3C5-209ENST00000485692 ERICH3Q5RHP9 1530 aa36.84■■■■□ 3.49
GTF3C5-209ENST00000485692 FHAD1B1AJZ9 1412 aa36.82■■■■□ 3.48
GTF3C5-209ENST00000485692 NUP160Q12769 1436 aa36.75■■■■□ 3.47
GTF3C5-209ENST00000485692 CEP170Q5SW79 1584 aa36.72■■■■□ 3.47
GTF3C5-209ENST00000485692 TRHP20396 242 aaPredicted RBP36.66■■■■□ 3.46
GTF3C5-209ENST00000485692 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
GTF3C5-209ENST00000485692 ERCC6L2Q5T890 1561 aa36.55■■■■□ 3.44
GTF3C5-209ENST00000485692 KIF27Q86VH2 1401 aa36.46■■■■□ 3.43
GTF3C5-209ENST00000485692 IGF1RP08069 1367 aa36.39■■■■□ 3.42
GTF3C5-209ENST00000485692 RUSC2Q8N2Y8 1516 aa36.37■■■■□ 3.41
GTF3C5-209ENST00000485692 PRG4Q92954 1404 aaPredicted RBP36.36■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms