RNA–Protein interactions for RNA: ENST00000485672.2

ATP1A3-206, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 970 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-206ENST00000485672 NISCHQ9Y2I1 1504 aa47.35■■■■■ 5.17
ATP1A3-206ENST00000485672 CCDC180Q9P1Z9 1646 aa42.46■■■■■ 4.39
ATP1A3-206ENST00000485672 ABCC9O60706 1549 aa42.23■■■■■ 4.35
ATP1A3-206ENST00000485672 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
ATP1A3-206ENST00000485672 NACADO15069 1562 aa40.06■■■■■ 4
ATP1A3-206ENST00000485672 DCAF8L2P0C7V8 631 aa39.85■■■■□ 3.97
ATP1A3-206ENST00000485672 MYO15BQ96JP2 1530 aa39.57■■■■□ 3.93
ATP1A3-206ENST00000485672 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
ATP1A3-206ENST00000485672 DNAJC5BQ9UF47 199 aa39.41■■■■□ 3.9
ATP1A3-206ENST00000485672 PABPN1Q86U42 306 aaKnown RBP eCLIP39.32■■■■□ 3.89
ATP1A3-206ENST00000485672 ZCCHC6Q5VYS8 1495 aaKnown RBP39.28■■■■□ 3.88
ATP1A3-206ENST00000485672 DCAF1Q9Y4B6 1507 aa39.13■■■■□ 3.85
ATP1A3-206ENST00000485672 BICRAQ9NZM4 1560 aa39.11■■■■□ 3.85
ATP1A3-206ENST00000485672 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
ATP1A3-206ENST00000485672 SHROOM4Q9ULL8 1493 aa38.62■■■■□ 3.77
ATP1A3-206ENST00000485672 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
ATP1A3-206ENST00000485672 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
ATP1A3-206ENST00000485672 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
ATP1A3-206ENST00000485672 NCAPD3P42695 1498 aa36.96■■■■□ 3.51
ATP1A3-206ENST00000485672 SMARCA4P51532 1647 aa36.92■■■■□ 3.5
ATP1A3-206ENST00000485672 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.49
ATP1A3-206ENST00000485672 SMARCA2P51531 1590 aa36.81■■■■□ 3.48
ATP1A3-206ENST00000485672 BAZ1AQ9NRL2 1556 aaPredicted RBP36.75■■■■□ 3.47
ATP1A3-206ENST00000485672 HMGXB3Q12766 1538 aa36.74■■■■□ 3.47
ATP1A3-206ENST00000485672 PEG3Q9GZU2 1588 aa36.55■■■■□ 3.44
ATP1A3-206ENST00000485672 BAZ1BQ9UIG0 1483 aaKnown RBP36.55■■■■□ 3.44
ATP1A3-206ENST00000485672 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
ATP1A3-206ENST00000485672 ERCC6Q03468 1493 aa36.46■■■■□ 3.43
ATP1A3-206ENST00000485672 CUX2O14529 1486 aa36.33■■■■□ 3.41
ATP1A3-206ENST00000485672 NESP48681 1621 aa36.33■■■■□ 3.41
ATP1A3-206ENST00000485672 LAMC3Q9Y6N6 1575 aa36.13■■■■□ 3.37
ATP1A3-206ENST00000485672 WIZO95785 1651 aa36.07■■■■□ 3.37
ATP1A3-206ENST00000485672 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
ATP1A3-206ENST00000485672 THOC2Q8NI27 1593 aaKnown RBP35.96■■■■□ 3.35
ATP1A3-206ENST00000485672 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
ATP1A3-206ENST00000485672 PDS5BQ9NTI5 1447 aa35.9■■■■□ 3.34
ATP1A3-206ENST00000485672 CADPSQ9ULU8 1353 aa35.84■■■■□ 3.33
ATP1A3-206ENST00000485672 RSF1Q96T23 1441 aaPredicted RBP35.77■■■■□ 3.32
ATP1A3-206ENST00000485672 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
ATP1A3-206ENST00000485672 MRC2Q9UBG0 1479 aa35.58■■■■□ 3.29
ATP1A3-206ENST00000485672 WDR62O43379 1518 aa35.5■■■■□ 3.27
ATP1A3-206ENST00000485672 CFTRP13569 1480 aa35.48■■■■□ 3.27
ATP1A3-206ENST00000485672 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
ATP1A3-206ENST00000485672 FANCD2Q9BXW9 1451 aa35.45■■■■□ 3.27
ATP1A3-206ENST00000485672 PRDM2Q13029 1718 aa35.22■■■■□ 3.23
ATP1A3-206ENST00000485672 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
ATP1A3-206ENST00000485672 URB2Q14146 1524 aaKnown RBP35.15■■■■□ 3.22
ATP1A3-206ENST00000485672 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
ATP1A3-206ENST00000485672 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
ATP1A3-206ENST00000485672 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
ATP1A3-206ENST00000485672 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.15
ATP1A3-206ENST00000485672 OSCARQ8IYS5 282 aa34.68■■■■□ 3.14
ATP1A3-206ENST00000485672 ZNF608Q9ULD9 1512 aaPredicted RBP34.68■■■■□ 3.14
ATP1A3-206ENST00000485672 TRIM41Q8WV44 630 aa34.57■■■■□ 3.12
ATP1A3-206ENST00000485672 EIF4G3O43432 1585 aaKnown RBP34.53■■■■□ 3.12
ATP1A3-206ENST00000485672 TARBP1Q13395 1621 aaKnown RBP34.49■■■■□ 3.11
ATP1A3-206ENST00000485672 POLA1P09884 1462 aaPredicted RBP34.46■■■■□ 3.11
ATP1A3-206ENST00000485672 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.09
ATP1A3-206ENST00000485672 RAD54L2Q9Y4B4 1467 aa34.32■■■■□ 3.08
ATP1A3-206ENST00000485672 SUPT5HO00267 1087 aaKnown RBP34.31■■■■□ 3.08
ATP1A3-206ENST00000485672 SOGA1O94964 1423 aa34.3■■■■□ 3.08
ATP1A3-206ENST00000485672 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
ATP1A3-206ENST00000485672 CUX1P39880 1505 aa34.27■■■■□ 3.08
ATP1A3-206ENST00000485672 CHD1O14646 1710 aa34.26■■■■□ 3.07
ATP1A3-206ENST00000485672 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
ATP1A3-206ENST00000485672 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
ATP1A3-206ENST00000485672 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
ATP1A3-206ENST00000485672 TDRD9Q8NDG6 1382 aaKnown RBP34.19■■■■□ 3.06
ATP1A3-206ENST00000485672 WDR97A6NE52 1622 aa34.17■■■■□ 3.06
ATP1A3-206ENST00000485672 ARHGEF11O15085 1522 aa34.15■■■■□ 3.06
ATP1A3-206ENST00000485672 FBLN2P98095 1184 aa34.11■■■■□ 3.05
ATP1A3-206ENST00000485672 SNAPC4Q5SXM2 1469 aa34.05■■■■□ 3.04
ATP1A3-206ENST00000485672 GRIN2BQ13224 1484 aa33.99■■■■□ 3.03
ATP1A3-206ENST00000485672 MAGI1Q96QZ7 1491 aaPredicted RBP33.98■■■■□ 3.03
ATP1A3-206ENST00000485672 PBRM1Q86U86 1689 aa33.91■■■■□ 3.02
ATP1A3-206ENST00000485672 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
ATP1A3-206ENST00000485672 GAPVD1Q14C86 1478 aa33.89■■■■□ 3.02
ATP1A3-206ENST00000485672 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
ATP1A3-206ENST00000485672 SYNJ2O15056 1496 aa33.86■■■■□ 3.01
ATP1A3-206ENST00000485672 CYB5RLQ6IPT4 315 aa33.85■■■■□ 3.01
ATP1A3-206ENST00000485672 ABCA5Q8WWZ7 1642 aa33.85■■■■□ 3.01
ATP1A3-206ENST00000485672 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
ATP1A3-206ENST00000485672 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
ATP1A3-206ENST00000485672 ARAP1Q96P48 1450 aa33.82■■■■□ 3
ATP1A3-206ENST00000485672 BIVM-ERCC5R4GMW8 1640 aa33.8■■■■□ 3
ATP1A3-206ENST00000485672 TOP2BQ02880 1626 aa33.79■■■■□ 3
ATP1A3-206ENST00000485672 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
ATP1A3-206ENST00000485672 ADAMTS12P58397 1594 aa33.58■■■□□ 2.97
ATP1A3-206ENST00000485672 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
ATP1A3-206ENST00000485672 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
ATP1A3-206ENST00000485672 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
ATP1A3-206ENST00000485672 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
ATP1A3-206ENST00000485672 TRHP20396 242 aaPredicted RBP33.43■■■□□ 2.94
ATP1A3-206ENST00000485672 NUP160Q12769 1436 aa33.43■■■□□ 2.94
ATP1A3-206ENST00000485672 ERCC6L2Q5T890 1561 aa33.32■■■□□ 2.92
ATP1A3-206ENST00000485672 SHROOM2Q13796 1616 aa33.29■■■□□ 2.92
ATP1A3-206ENST00000485672 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
ATP1A3-206ENST00000485672 RUSC2Q8N2Y8 1516 aa33.1■■■□□ 2.89
ATP1A3-206ENST00000485672 PRG4Q92954 1404 aaPredicted RBP33.09■■■□□ 2.89
ATP1A3-206ENST00000485672 JPH4Q96JJ6 628 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms