RNA–Protein interactions for RNA: ENST00000485606.1

EXOSC10-209, Transcript of exosome component 10, humanhuman

TSL 3

Gene EXOSC10, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-209ENST00000485606 NISCHQ9Y2I1 1504 aa45.43■■■■■ 4.86
EXOSC10-209ENST00000485606 CCDC180Q9P1Z9 1646 aa40.68■■■■■ 4.1
EXOSC10-209ENST00000485606 ABCC9O60706 1549 aa40.16■■■■■ 4.02
EXOSC10-209ENST00000485606 RB1CC1Q8TDY2 1594 aa38.48■■■■□ 3.75
EXOSC10-209ENST00000485606 NACADO15069 1562 aa38.32■■■■□ 3.73
EXOSC10-209ENST00000485606 DCAF8L2P0C7V8 631 aa38.01■■■■□ 3.68
EXOSC10-209ENST00000485606 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
EXOSC10-209ENST00000485606 ZCCHC6Q5VYS8 1495 aaKnown RBP37.76■■■■□ 3.63
EXOSC10-209ENST00000485606 UNC13AQ9UPW8 1703 aa37.66■■■■□ 3.62
EXOSC10-209ENST00000485606 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
EXOSC10-209ENST00000485606 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
EXOSC10-209ENST00000485606 BICRAQ9NZM4 1560 aa37.34■■■■□ 3.57
EXOSC10-209ENST00000485606 DNAJC5BQ9UF47 199 aa37.28■■■■□ 3.56
EXOSC10-209ENST00000485606 SCRIBQ14160 1630 aa37.01■■■■□ 3.52
EXOSC10-209ENST00000485606 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
EXOSC10-209ENST00000485606 EIF4G1Q04637 1599 aaKnown RBP36.39■■■■□ 3.42
EXOSC10-209ENST00000485606 CC2D2AQ9P2K1 1620 aa36.36■■■■□ 3.41
EXOSC10-209ENST00000485606 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
EXOSC10-209ENST00000485606 SMARCA4P51532 1647 aa35.38■■■■□ 3.25
EXOSC10-209ENST00000485606 NCAPD3P42695 1498 aa35.34■■■■□ 3.25
EXOSC10-209ENST00000485606 ATAD2BQ9ULI0 1458 aa35.28■■■■□ 3.24
EXOSC10-209ENST00000485606 BAZ1AQ9NRL2 1556 aaPredicted RBP35.26■■■■□ 3.24
EXOSC10-209ENST00000485606 SMARCA2P51531 1590 aa35.25■■■■□ 3.23
EXOSC10-209ENST00000485606 HMGXB3Q12766 1538 aa35.16■■■■□ 3.22
EXOSC10-209ENST00000485606 PEG3Q9GZU2 1588 aa35.06■■■■□ 3.2
EXOSC10-209ENST00000485606 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
EXOSC10-209ENST00000485606 BAZ1BQ9UIG0 1483 aaKnown RBP34.97■■■■□ 3.19
EXOSC10-209ENST00000485606 ERCC6Q03468 1493 aa34.68■■■■□ 3.14
EXOSC10-209ENST00000485606 NESP48681 1621 aa34.63■■■■□ 3.13
EXOSC10-209ENST00000485606 WIZO95785 1651 aa34.6■■■■□ 3.13
EXOSC10-209ENST00000485606 CUX2O14529 1486 aa34.53■■■■□ 3.12
EXOSC10-209ENST00000485606 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
EXOSC10-209ENST00000485606 RSF1Q96T23 1441 aaPredicted RBP34.39■■■■□ 3.1
EXOSC10-209ENST00000485606 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
EXOSC10-209ENST00000485606 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
EXOSC10-209ENST00000485606 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
EXOSC10-209ENST00000485606 KIF21AQ7Z4S6 1674 aa34.26■■■■□ 3.08
EXOSC10-209ENST00000485606 TOP2AP11388 1531 aaKnown RBP34.22■■■■□ 3.07
EXOSC10-209ENST00000485606 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
EXOSC10-209ENST00000485606 CFTRP13569 1480 aa33.98■■■■□ 3.03
EXOSC10-209ENST00000485606 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
EXOSC10-209ENST00000485606 CEP164Q9UPV0 1460 aa33.9■■■■□ 3.02
EXOSC10-209ENST00000485606 WDR62O43379 1518 aa33.89■■■■□ 3.02
EXOSC10-209ENST00000485606 FANCD2Q9BXW9 1451 aa33.88■■■■□ 3.01
EXOSC10-209ENST00000485606 PRDM2Q13029 1718 aa33.78■■■■□ 3
EXOSC10-209ENST00000485606 CCDC88BA6NC98 1476 aa33.77■■■■□ 3
EXOSC10-209ENST00000485606 URB2Q14146 1524 aaKnown RBP33.58■■■□□ 2.97
EXOSC10-209ENST00000485606 TOPBP1Q92547 1522 aa33.29■■■□□ 2.92
EXOSC10-209ENST00000485606 ABCC8Q09428 1581 aa33.28■■■□□ 2.92
EXOSC10-209ENST00000485606 DNMBPQ6XZF7 1577 aa33.24■■■□□ 2.91
EXOSC10-209ENST00000485606 IFT140Q96RY7 1462 aa33.21■■■□□ 2.91
EXOSC10-209ENST00000485606 ZNF608Q9ULD9 1512 aaPredicted RBP33.09■■■□□ 2.89
EXOSC10-209ENST00000485606 SUPT5HO00267 1087 aaKnown RBP33.06■■■□□ 2.88
EXOSC10-209ENST00000485606 TARBP1Q13395 1621 aaKnown RBP33■■■□□ 2.87
EXOSC10-209ENST00000485606 EIF4G3O43432 1585 aaKnown RBP32.99■■■□□ 2.87
EXOSC10-209ENST00000485606 POLA1P09884 1462 aaPredicted RBP32.99■■■□□ 2.87
EXOSC10-209ENST00000485606 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
EXOSC10-209ENST00000485606 CUX1P39880 1505 aa32.87■■■□□ 2.85
EXOSC10-209ENST00000485606 FGD5Q6ZNL6 1462 aa32.82■■■□□ 2.84
EXOSC10-209ENST00000485606 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.843e-11■■■■□ 23.3
EXOSC10-209ENST00000485606 RAD54L2Q9Y4B4 1467 aa32.8■■■□□ 2.84
EXOSC10-209ENST00000485606 SOGA1O94964 1423 aa32.8■■■□□ 2.84
EXOSC10-209ENST00000485606 WDR97A6NE52 1622 aa32.75■■■□□ 2.83
EXOSC10-209ENST00000485606 CHD1O14646 1710 aa32.68■■■□□ 2.82
EXOSC10-209ENST00000485606 TDRD9Q8NDG6 1382 aaKnown RBP32.66■■■□□ 2.82
EXOSC10-209ENST00000485606 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
EXOSC10-209ENST00000485606 RIMBP3CA6NJZ7 1639 aa32.54■■■□□ 2.8
EXOSC10-209ENST00000485606 RIMBP3BA6NNM3 1639 aa32.54■■■□□ 2.8
EXOSC10-209ENST00000485606 RIMBP3Q9UFD9 1639 aa32.54■■■□□ 2.8
EXOSC10-209ENST00000485606 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
EXOSC10-209ENST00000485606 GRIN2BQ13224 1484 aa32.51■■■□□ 2.79
EXOSC10-209ENST00000485606 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
EXOSC10-209ENST00000485606 BIVM-ERCC5R4GMW8 1640 aa32.5■■■□□ 2.79
EXOSC10-209ENST00000485606 ABCA10Q8WWZ4 1543 aa32.5■■■□□ 2.79
EXOSC10-209ENST00000485606 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
EXOSC10-209ENST00000485606 FBLN2P98095 1184 aa32.47■■■□□ 2.79
EXOSC10-209ENST00000485606 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
EXOSC10-209ENST00000485606 ARHGEF11O15085 1522 aa32.46■■■□□ 2.79
EXOSC10-209ENST00000485606 ABCA5Q8WWZ7 1642 aa32.44■■■□□ 2.78
EXOSC10-209ENST00000485606 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
EXOSC10-209ENST00000485606 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
EXOSC10-209ENST00000485606 SYNJ1O43426 1573 aa32.42■■■□□ 2.78
EXOSC10-209ENST00000485606 SYNJ2O15056 1496 aa32.36■■■□□ 2.77
EXOSC10-209ENST00000485606 CHMP7Q8WUX9 453 aaPredicted RBP32.33■■■□□ 2.77
EXOSC10-209ENST00000485606 CLASP1Q7Z460 1538 aa32.3■■■□□ 2.76
EXOSC10-209ENST00000485606 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
EXOSC10-209ENST00000485606 ADAMTS12P58397 1594 aa32.16■■■□□ 2.74
EXOSC10-209ENST00000485606 ERICH3Q5RHP9 1530 aa32.11■■■□□ 2.73
EXOSC10-209ENST00000485606 CYB5RLQ6IPT4 315 aa32.11■■■□□ 2.73
EXOSC10-209ENST00000485606 GRIN2AQ12879 1464 aa32.1■■■□□ 2.73
EXOSC10-209ENST00000485606 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
EXOSC10-209ENST00000485606 NUP160Q12769 1436 aa31.98■■■□□ 2.71
EXOSC10-209ENST00000485606 CEP170Q5SW79 1584 aa31.97■■■□□ 2.71
EXOSC10-209ENST00000485606 SHROOM2Q13796 1616 aa31.84■■■□□ 2.69
EXOSC10-209ENST00000485606 KIF27Q86VH2 1401 aa31.81■■■□□ 2.68
EXOSC10-209ENST00000485606 ERCC6L2Q5T890 1561 aa31.78■■■□□ 2.68
EXOSC10-209ENST00000485606 CUL7Q14999 1698 aa31.75■■■□□ 2.67
EXOSC10-209ENST00000485606 IGF1RP08069 1367 aa31.71■■■□□ 2.67
EXOSC10-209ENST00000485606 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
EXOSC10-209ENST00000485606 TRHP20396 242 aaPredicted RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms