RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
NPDC1-204ENST00000485589 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
NPDC1-204ENST00000485589 ABCC9O60706 1549 aa39.65■■■■□ 3.94
NPDC1-204ENST00000485589 RB1CC1Q8TDY2 1594 aa37.78■■■■□ 3.64
NPDC1-204ENST00000485589 NACADO15069 1562 aa37.55■■■■□ 3.6
NPDC1-204ENST00000485589 UNC13AQ9UPW8 1703 aa37.3■■■■□ 3.56
NPDC1-204ENST00000485589 DCAF8L2P0C7V8 631 aa37.19■■■■□ 3.54
NPDC1-204ENST00000485589 DNAJC5BQ9UF47 199 aa37.1■■■■□ 3.53
NPDC1-204ENST00000485589 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
NPDC1-204ENST00000485589 PABPN1Q86U42 306 aaKnown RBP eCLIP36.86■■■■□ 3.49
NPDC1-204ENST00000485589 ZCCHC6Q5VYS8 1495 aaKnown RBP36.86■■■■□ 3.49
NPDC1-204ENST00000485589 BICRAQ9NZM4 1560 aa36.85■■■■□ 3.49
NPDC1-204ENST00000485589 DCAF1Q9Y4B6 1507 aa36.65■■■■□ 3.46
NPDC1-204ENST00000485589 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
NPDC1-204ENST00000485589 SHROOM4Q9ULL8 1493 aa36.12■■■■□ 3.37
NPDC1-204ENST00000485589 CC2D2AQ9P2K1 1620 aa35.91■■■■□ 3.34
NPDC1-204ENST00000485589 EIF4G1Q04637 1599 aaKnown RBP35.84■■■■□ 3.33
NPDC1-204ENST00000485589 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
NPDC1-204ENST00000485589 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
NPDC1-204ENST00000485589 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
NPDC1-204ENST00000485589 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
NPDC1-204ENST00000485589 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
NPDC1-204ENST00000485589 HMGXB3Q12766 1538 aa34.45■■■■□ 3.11
NPDC1-204ENST00000485589 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
NPDC1-204ENST00000485589 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.08
NPDC1-204ENST00000485589 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
NPDC1-204ENST00000485589 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
NPDC1-204ENST00000485589 NESP48681 1621 aa34.18■■■■□ 3.06
NPDC1-204ENST00000485589 ERCC6Q03468 1493 aa34.11■■■■□ 3.05
NPDC1-204ENST00000485589 CUX2O14529 1486 aa34.04■■■■□ 3.04
NPDC1-204ENST00000485589 WIZO95785 1651 aa33.96■■■■□ 3.03
NPDC1-204ENST00000485589 LAMC3Q9Y6N6 1575 aa33.89■■■■□ 3.02
NPDC1-204ENST00000485589 KIF21AQ7Z4S6 1674 aa33.87■■■■□ 3.01
NPDC1-204ENST00000485589 THOC2Q8NI27 1593 aaKnown RBP33.87■■■■□ 3.01
NPDC1-204ENST00000485589 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
NPDC1-204ENST00000485589 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
NPDC1-204ENST00000485589 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
NPDC1-204ENST00000485589 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
NPDC1-204ENST00000485589 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
NPDC1-204ENST00000485589 MRC2Q9UBG0 1479 aa33.34■■■□□ 2.93
NPDC1-204ENST00000485589 WDR62O43379 1518 aa33.33■■■□□ 2.93
NPDC1-204ENST00000485589 CFTRP13569 1480 aa33.25■■■□□ 2.91
NPDC1-204ENST00000485589 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
NPDC1-204ENST00000485589 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
NPDC1-204ENST00000485589 PRDM2Q13029 1718 aa33.21■■■□□ 2.91
NPDC1-204ENST00000485589 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
NPDC1-204ENST00000485589 CCDC88BA6NC98 1476 aa33■■■□□ 2.87
NPDC1-204ENST00000485589 TOPBP1Q92547 1522 aa32.66■■■□□ 2.82
NPDC1-204ENST00000485589 ZNF608Q9ULD9 1512 aaPredicted RBP32.59■■■□□ 2.81
NPDC1-204ENST00000485589 DNMBPQ6XZF7 1577 aa32.56■■■□□ 2.8
NPDC1-204ENST00000485589 IFT140Q96RY7 1462 aa32.53■■■□□ 2.8
NPDC1-204ENST00000485589 EIF4G3O43432 1585 aaKnown RBP32.47■■■□□ 2.79
NPDC1-204ENST00000485589 TARBP1Q13395 1621 aaKnown RBP32.45■■■□□ 2.79
NPDC1-204ENST00000485589 ABCC8Q09428 1581 aa32.45■■■□□ 2.78
NPDC1-204ENST00000485589 OSCARQ8IYS5 282 aa32.38■■■□□ 2.77
NPDC1-204ENST00000485589 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
NPDC1-204ENST00000485589 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
NPDC1-204ENST00000485589 CHD1O14646 1710 aa32.31■■■□□ 2.76
NPDC1-204ENST00000485589 RIMBP3CA6NJZ7 1639 aa32.25■■■□□ 2.75
NPDC1-204ENST00000485589 RIMBP3BA6NNM3 1639 aa32.25■■■□□ 2.75
NPDC1-204ENST00000485589 RIMBP3Q9UFD9 1639 aa32.25■■■□□ 2.75
NPDC1-204ENST00000485589 AQRO60306 1485 aaKnown RBP eCLIP32.24■■■□□ 2.751e-7■■■■□ 26.4
NPDC1-204ENST00000485589 RAD54L2Q9Y4B4 1467 aa32.22■■■□□ 2.75
NPDC1-204ENST00000485589 CUX1P39880 1505 aa32.19■■■□□ 2.74
NPDC1-204ENST00000485589 FGD5Q6ZNL6 1462 aa32.14■■■□□ 2.74
NPDC1-204ENST00000485589 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
NPDC1-204ENST00000485589 SOGA1O94964 1423 aa32.08■■■□□ 2.73
NPDC1-204ENST00000485589 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
NPDC1-204ENST00000485589 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
NPDC1-204ENST00000485589 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
NPDC1-204ENST00000485589 PBRM1Q86U86 1689 aa31.95■■■□□ 2.7
NPDC1-204ENST00000485589 SNAPC4Q5SXM2 1469 aa31.94■■■□□ 2.7
NPDC1-204ENST00000485589 FBLN2P98095 1184 aa31.84■■■□□ 2.69
NPDC1-204ENST00000485589 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.69
NPDC1-204ENST00000485589 CLASP1Q7Z460 1538 aa31.82■■■□□ 2.68
NPDC1-204ENST00000485589 GRIN2BQ13224 1484 aa31.8■■■□□ 2.68
NPDC1-204ENST00000485589 MAGI1Q96QZ7 1491 aaPredicted RBP31.8■■■□□ 2.68
NPDC1-204ENST00000485589 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
NPDC1-204ENST00000485589 BIVM-ERCC5R4GMW8 1640 aa31.77■■■□□ 2.68
NPDC1-204ENST00000485589 ABCA10Q8WWZ4 1543 aa31.75■■■□□ 2.67
NPDC1-204ENST00000485589 GAPVD1Q14C86 1478 aa31.73■■■□□ 2.67
NPDC1-204ENST00000485589 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
NPDC1-204ENST00000485589 TOP2BQ02880 1626 aa31.7■■■□□ 2.66
NPDC1-204ENST00000485589 SYNJ2O15056 1496 aa31.7■■■□□ 2.66
NPDC1-204ENST00000485589 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
NPDC1-204ENST00000485589 CHMP7Q8WUX9 453 aaPredicted RBP31.61■■■□□ 2.65
NPDC1-204ENST00000485589 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
NPDC1-204ENST00000485589 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
NPDC1-204ENST00000485589 GRIN2AQ12879 1464 aa31.45■■■□□ 2.62
NPDC1-204ENST00000485589 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
NPDC1-204ENST00000485589 ERCC6L2Q5T890 1561 aa31.4■■■□□ 2.62
NPDC1-204ENST00000485589 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
NPDC1-204ENST00000485589 NUP160Q12769 1436 aa31.34■■■□□ 2.61
NPDC1-204ENST00000485589 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
NPDC1-204ENST00000485589 FHAD1B1AJZ9 1412 aa31.29■■■□□ 2.6
NPDC1-204ENST00000485589 TRHP20396 242 aaPredicted RBP31.21■■■□□ 2.59
NPDC1-204ENST00000485589 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
NPDC1-204ENST00000485589 CUL7Q14999 1698 aa30.99■■■□□ 2.55
NPDC1-204ENST00000485589 PRG4Q92954 1404 aaPredicted RBP30.97■■■□□ 2.55
NPDC1-204ENST00000485589 IGF1RP08069 1367 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms