RNA–Protein interactions for RNA: ENST00000485555.1

TNS3-212, Transcript of tensin 3, humanhuman

TSL 3

Gene TNS3, Length 357 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-212ENST00000485555 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
TNS3-212ENST00000485555 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
TNS3-212ENST00000485555 ABCC9O60706 1549 aa19.25■□□□□ 0.67
TNS3-212ENST00000485555 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
TNS3-212ENST00000485555 NACADO15069 1562 aa18.32■□□□□ 0.52
TNS3-212ENST00000485555 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
TNS3-212ENST00000485555 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
TNS3-212ENST00000485555 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
TNS3-212ENST00000485555 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
TNS3-212ENST00000485555 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
TNS3-212ENST00000485555 UNC13AQ9UPW8 1703 aa17.93■□□□□ 0.46
TNS3-212ENST00000485555 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
TNS3-212ENST00000485555 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
TNS3-212ENST00000485555 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
TNS3-212ENST00000485555 SCRIBQ14160 1630 aa17.58■□□□□ 0.41
TNS3-212ENST00000485555 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
TNS3-212ENST00000485555 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
TNS3-212ENST00000485555 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
TNS3-212ENST00000485555 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
TNS3-212ENST00000485555 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
TNS3-212ENST00000485555 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
TNS3-212ENST00000485555 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
TNS3-212ENST00000485555 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
TNS3-212ENST00000485555 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
TNS3-212ENST00000485555 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
TNS3-212ENST00000485555 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
TNS3-212ENST00000485555 CUX2O14529 1486 aa16.65■□□□□ 0.26
TNS3-212ENST00000485555 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
TNS3-212ENST00000485555 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
TNS3-212ENST00000485555 NESP48681 1621 aa16.57■□□□□ 0.24
TNS3-212ENST00000485555 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
TNS3-212ENST00000485555 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
TNS3-212ENST00000485555 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
TNS3-212ENST00000485555 WIZO95785 1651 aa16.4■□□□□ 0.22
TNS3-212ENST00000485555 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
TNS3-212ENST00000485555 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
TNS3-212ENST00000485555 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
TNS3-212ENST00000485555 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
TNS3-212ENST00000485555 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
TNS3-212ENST00000485555 CFTRP13569 1480 aa16.25■□□□□ 0.19
TNS3-212ENST00000485555 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
TNS3-212ENST00000485555 WDR62O43379 1518 aa16.24■□□□□ 0.19
TNS3-212ENST00000485555 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
TNS3-212ENST00000485555 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
TNS3-212ENST00000485555 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
TNS3-212ENST00000485555 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
TNS3-212ENST00000485555 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
TNS3-212ENST00000485555 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
TNS3-212ENST00000485555 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
TNS3-212ENST00000485555 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
TNS3-212ENST00000485555 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
TNS3-212ENST00000485555 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
TNS3-212ENST00000485555 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
TNS3-212ENST00000485555 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
TNS3-212ENST00000485555 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
TNS3-212ENST00000485555 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
TNS3-212ENST00000485555 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
TNS3-212ENST00000485555 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
TNS3-212ENST00000485555 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
TNS3-212ENST00000485555 CUX1P39880 1505 aa15.64■□□□□ 0.09
TNS3-212ENST00000485555 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
TNS3-212ENST00000485555 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
TNS3-212ENST00000485555 SOGA1O94964 1423 aa15.62■□□□□ 0.09
TNS3-212ENST00000485555 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
TNS3-212ENST00000485555 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
TNS3-212ENST00000485555 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
TNS3-212ENST00000485555 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
TNS3-212ENST00000485555 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
TNS3-212ENST00000485555 CHD1O14646 1710 aa15.56■□□□□ 0.08
TNS3-212ENST00000485555 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
TNS3-212ENST00000485555 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
TNS3-212ENST00000485555 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
TNS3-212ENST00000485555 ABCA10Q8WWZ4 1543 aa15.5■□□□□ 0.07
TNS3-212ENST00000485555 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
TNS3-212ENST00000485555 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
TNS3-212ENST00000485555 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
TNS3-212ENST00000485555 ARAP1Q96P48 1450 aa15.47■□□□□ 0.07
TNS3-212ENST00000485555 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
TNS3-212ENST00000485555 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
TNS3-212ENST00000485555 FBLN2P98095 1184 aa15.45■□□□□ 0.06
TNS3-212ENST00000485555 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
TNS3-212ENST00000485555 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
TNS3-212ENST00000485555 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
TNS3-212ENST00000485555 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
TNS3-212ENST00000485555 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
TNS3-212ENST00000485555 CYB5RLQ6IPT4 315 aa15.4■□□□□ 0.06
TNS3-212ENST00000485555 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
TNS3-212ENST00000485555 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
TNS3-212ENST00000485555 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
TNS3-212ENST00000485555 NUP160Q12769 1436 aa15.32■□□□□ 0.04
TNS3-212ENST00000485555 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
TNS3-212ENST00000485555 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
TNS3-212ENST00000485555 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
TNS3-212ENST00000485555 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
TNS3-212ENST00000485555 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
TNS3-212ENST00000485555 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
TNS3-212ENST00000485555 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
TNS3-212ENST00000485555 IGF1RP08069 1367 aa15.11■□□□□ 0.01
TNS3-212ENST00000485555 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
TNS3-212ENST00000485555 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms