RNA–Protein interactions for RNA: ENST00000485533.1

VSIG1-205, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 5

Gene VSIG1, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-205ENST00000485533 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
VSIG1-205ENST00000485533 ABCC9O60706 1549 aa12.59□□□□□ -0.39
VSIG1-205ENST00000485533 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
VSIG1-205ENST00000485533 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
VSIG1-205ENST00000485533 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
VSIG1-205ENST00000485533 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
VSIG1-205ENST00000485533 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
VSIG1-205ENST00000485533 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
VSIG1-205ENST00000485533 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
VSIG1-205ENST00000485533 NACADO15069 1562 aa11.48□□□□□ -0.57
VSIG1-205ENST00000485533 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
VSIG1-205ENST00000485533 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
VSIG1-205ENST00000485533 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
VSIG1-205ENST00000485533 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
VSIG1-205ENST00000485533 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
VSIG1-205ENST00000485533 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
VSIG1-205ENST00000485533 MYO15BQ96JP2 1530 aa11.16□□□□□ -0.62
VSIG1-205ENST00000485533 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
VSIG1-205ENST00000485533 CUX2O14529 1486 aa11.06□□□□□ -0.64
VSIG1-205ENST00000485533 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
VSIG1-205ENST00000485533 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
VSIG1-205ENST00000485533 ERCC6Q03468 1493 aa10.86□□□□□ -0.67
VSIG1-205ENST00000485533 DCAF1Q9Y4B6 1507 aa10.81□□□□□ -0.68
VSIG1-205ENST00000485533 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
VSIG1-205ENST00000485533 NESP48681 1621 aa10.68□□□□□ -0.7
VSIG1-205ENST00000485533 NCAPD3P42695 1498 aa10.66□□□□□ -0.7
VSIG1-205ENST00000485533 THOC2Q8NI27 1593 aaKnown RBP10.64□□□□□ -0.71
VSIG1-205ENST00000485533 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
VSIG1-205ENST00000485533 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
VSIG1-205ENST00000485533 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
VSIG1-205ENST00000485533 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
VSIG1-205ENST00000485533 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
VSIG1-205ENST00000485533 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
VSIG1-205ENST00000485533 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
VSIG1-205ENST00000485533 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
VSIG1-205ENST00000485533 RIMBP3CA6NJZ7 1639 aa10.38□□□□□ -0.75
VSIG1-205ENST00000485533 RIMBP3BA6NNM3 1639 aa10.38□□□□□ -0.75
VSIG1-205ENST00000485533 RIMBP3Q9UFD9 1639 aa10.38□□□□□ -0.75
VSIG1-205ENST00000485533 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
VSIG1-205ENST00000485533 WDR62O43379 1518 aa10.37□□□□□ -0.75
VSIG1-205ENST00000485533 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
VSIG1-205ENST00000485533 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
VSIG1-205ENST00000485533 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
VSIG1-205ENST00000485533 ARHGEF11O15085 1522 aa10.31□□□□□ -0.76
VSIG1-205ENST00000485533 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
VSIG1-205ENST00000485533 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
VSIG1-205ENST00000485533 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
VSIG1-205ENST00000485533 ARAP1Q96P48 1450 aa10.2□□□□□ -0.78
VSIG1-205ENST00000485533 CEP164Q9UPV0 1460 aa10.2□□□□□ -0.78
VSIG1-205ENST00000485533 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
VSIG1-205ENST00000485533 URB2Q14146 1524 aaKnown RBP10.14□□□□□ -0.79
VSIG1-205ENST00000485533 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
VSIG1-205ENST00000485533 MROH2BQ7Z745 1585 aa10.14□□□□□ -0.79
VSIG1-205ENST00000485533 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
VSIG1-205ENST00000485533 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
VSIG1-205ENST00000485533 SENP3Q9H4L4 574 aaPredicted RBP10.07□□□□□ -0.8
VSIG1-205ENST00000485533 CFTRP13569 1480 aa10.06□□□□□ -0.8
VSIG1-205ENST00000485533 RSF1Q96T23 1441 aaPredicted RBP10.06□□□□□ -0.8
VSIG1-205ENST00000485533 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
VSIG1-205ENST00000485533 CHD1O14646 1710 aa9.98□□□□□ -0.81
VSIG1-205ENST00000485533 EIF4G3O43432 1585 aaKnown RBP9.97□□□□□ -0.81
VSIG1-205ENST00000485533 FBLN2P98095 1184 aa9.95□□□□□ -0.82
VSIG1-205ENST00000485533 AQRO60306 1485 aaKnown RBP eCLIP9.95□□□□□ -0.82
VSIG1-205ENST00000485533 WIZO95785 1651 aa9.95□□□□□ -0.82
VSIG1-205ENST00000485533 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
VSIG1-205ENST00000485533 TOPBP1Q92547 1522 aa9.92□□□□□ -0.82
VSIG1-205ENST00000485533 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
VSIG1-205ENST00000485533 TARBP1Q13395 1621 aaKnown RBP9.86□□□□□ -0.83
VSIG1-205ENST00000485533 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
VSIG1-205ENST00000485533 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
VSIG1-205ENST00000485533 DNMBPQ6XZF7 1577 aa9.8□□□□□ -0.84
VSIG1-205ENST00000485533 SNAPC4Q5SXM2 1469 aa9.8□□□□□ -0.84
VSIG1-205ENST00000485533 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
VSIG1-205ENST00000485533 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
VSIG1-205ENST00000485533 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
VSIG1-205ENST00000485533 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
VSIG1-205ENST00000485533 POLA1P09884 1462 aaPredicted RBP9.79□□□□□ -0.84
VSIG1-205ENST00000485533 RAD54L2Q9Y4B4 1467 aa9.78□□□□□ -0.84
VSIG1-205ENST00000485533 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
VSIG1-205ENST00000485533 KIF13AQ9H1H9 1805 aa9.75□□□□□ -0.85
VSIG1-205ENST00000485533 ERCC6L2Q5T890 1561 aa9.74□□□□□ -0.85
VSIG1-205ENST00000485533 MAGI1Q96QZ7 1491 aaPredicted RBP9.73□□□□□ -0.85
VSIG1-205ENST00000485533 SOGA1O94964 1423 aa9.73□□□□□ -0.85
VSIG1-205ENST00000485533 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
VSIG1-205ENST00000485533 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
VSIG1-205ENST00000485533 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
VSIG1-205ENST00000485533 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
VSIG1-205ENST00000485533 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
VSIG1-205ENST00000485533 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
VSIG1-205ENST00000485533 ABCC10Q5T3U5 1492 aa9.66□□□□□ -0.86
VSIG1-205ENST00000485533 HECW2Q9P2P5 1572 aa9.64□□□□□ -0.87
VSIG1-205ENST00000485533 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
VSIG1-205ENST00000485533 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
VSIG1-205ENST00000485533 KDM6BO15054 1643 aa9.62□□□□□ -0.87
VSIG1-205ENST00000485533 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
VSIG1-205ENST00000485533 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
VSIG1-205ENST00000485533 NUP160Q12769 1436 aa9.58□□□□□ -0.88
VSIG1-205ENST00000485533 SHROOM2Q13796 1616 aa9.57□□□□□ -0.88
VSIG1-205ENST00000485533 GRIN2AQ12879 1464 aa9.57□□□□□ -0.88
VSIG1-205ENST00000485533 LMTK3Q96Q04 1460 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms