RNA–Protein interactions for RNA: ENST00000485436.1

PHLDA3-203, Transcript of pleckstrin homology like domain family A member 3, humanhuman

TSL 3

Gene PHLDA3, Length 661 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-203ENST00000485436 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
PHLDA3-203ENST00000485436 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
PHLDA3-203ENST00000485436 ABCC9O60706 1549 aa30.91■■■□□ 2.54
PHLDA3-203ENST00000485436 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
PHLDA3-203ENST00000485436 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
PHLDA3-203ENST00000485436 NACADO15069 1562 aa29.47■■■□□ 2.31
PHLDA3-203ENST00000485436 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
PHLDA3-203ENST00000485436 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
PHLDA3-203ENST00000485436 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
PHLDA3-203ENST00000485436 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
PHLDA3-203ENST00000485436 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
PHLDA3-203ENST00000485436 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
PHLDA3-203ENST00000485436 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
PHLDA3-203ENST00000485436 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
PHLDA3-203ENST00000485436 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
PHLDA3-203ENST00000485436 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
PHLDA3-203ENST00000485436 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
PHLDA3-203ENST00000485436 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
PHLDA3-203ENST00000485436 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
PHLDA3-203ENST00000485436 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
PHLDA3-203ENST00000485436 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
PHLDA3-203ENST00000485436 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
PHLDA3-203ENST00000485436 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
PHLDA3-203ENST00000485436 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
PHLDA3-203ENST00000485436 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
PHLDA3-203ENST00000485436 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
PHLDA3-203ENST00000485436 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
PHLDA3-203ENST00000485436 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
PHLDA3-203ENST00000485436 WIZO95785 1651 aa26.78■■□□□ 1.88
PHLDA3-203ENST00000485436 NESP48681 1621 aa26.72■■□□□ 1.87
PHLDA3-203ENST00000485436 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
PHLDA3-203ENST00000485436 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
PHLDA3-203ENST00000485436 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
PHLDA3-203ENST00000485436 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
PHLDA3-203ENST00000485436 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
PHLDA3-203ENST00000485436 CUX2O14529 1486 aa26.37■■□□□ 1.81
PHLDA3-203ENST00000485436 CFTRP13569 1480 aa26.28■■□□□ 1.8
PHLDA3-203ENST00000485436 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
PHLDA3-203ENST00000485436 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PHLDA3-203ENST00000485436 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PHLDA3-203ENST00000485436 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
PHLDA3-203ENST00000485436 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
PHLDA3-203ENST00000485436 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
PHLDA3-203ENST00000485436 WDR62O43379 1518 aa26.01■■□□□ 1.75
PHLDA3-203ENST00000485436 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
PHLDA3-203ENST00000485436 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
PHLDA3-203ENST00000485436 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
PHLDA3-203ENST00000485436 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
PHLDA3-203ENST00000485436 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
PHLDA3-203ENST00000485436 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
PHLDA3-203ENST00000485436 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
PHLDA3-203ENST00000485436 IFT140Q96RY7 1462 aa25.57■■□□□ 1.68
PHLDA3-203ENST00000485436 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
PHLDA3-203ENST00000485436 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
PHLDA3-203ENST00000485436 CUX1P39880 1505 aa25.45■■□□□ 1.66
PHLDA3-203ENST00000485436 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
PHLDA3-203ENST00000485436 TARBP1Q13395 1621 aaKnown RBP25.42■■□□□ 1.66
PHLDA3-203ENST00000485436 SOGA1O94964 1423 aa25.4■■□□□ 1.66
PHLDA3-203ENST00000485436 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.661e-6■■■■□ 26.1
PHLDA3-203ENST00000485436 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
PHLDA3-203ENST00000485436 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
PHLDA3-203ENST00000485436 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
PHLDA3-203ENST00000485436 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
PHLDA3-203ENST00000485436 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
PHLDA3-203ENST00000485436 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
PHLDA3-203ENST00000485436 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PHLDA3-203ENST00000485436 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
PHLDA3-203ENST00000485436 FBLN2P98095 1184 aa25.1■■□□□ 1.61
PHLDA3-203ENST00000485436 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
PHLDA3-203ENST00000485436 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
PHLDA3-203ENST00000485436 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
PHLDA3-203ENST00000485436 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
PHLDA3-203ENST00000485436 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
PHLDA3-203ENST00000485436 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
PHLDA3-203ENST00000485436 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
PHLDA3-203ENST00000485436 CHD1O14646 1710 aa25■■□□□ 1.59
PHLDA3-203ENST00000485436 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
PHLDA3-203ENST00000485436 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
PHLDA3-203ENST00000485436 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
PHLDA3-203ENST00000485436 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
PHLDA3-203ENST00000485436 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
PHLDA3-203ENST00000485436 RIMBP3CA6NJZ7 1639 aa24.87■■□□□ 1.57
PHLDA3-203ENST00000485436 RIMBP3BA6NNM3 1639 aa24.87■■□□□ 1.57
PHLDA3-203ENST00000485436 RIMBP3Q9UFD9 1639 aa24.87■■□□□ 1.57
PHLDA3-203ENST00000485436 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
PHLDA3-203ENST00000485436 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
PHLDA3-203ENST00000485436 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
PHLDA3-203ENST00000485436 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
PHLDA3-203ENST00000485436 GRIN2AQ12879 1464 aa24.75■■□□□ 1.55
PHLDA3-203ENST00000485436 ADAMTS12P58397 1594 aa24.74■■□□□ 1.55
PHLDA3-203ENST00000485436 IGF1RP08069 1367 aa24.72■■□□□ 1.55
PHLDA3-203ENST00000485436 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
PHLDA3-203ENST00000485436 NUP160Q12769 1436 aa24.69■■□□□ 1.54
PHLDA3-203ENST00000485436 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
PHLDA3-203ENST00000485436 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
PHLDA3-203ENST00000485436 ERCC6L2Q5T890 1561 aa24.53■■□□□ 1.52
PHLDA3-203ENST00000485436 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
PHLDA3-203ENST00000485436 CARMIL1Q5VZK9 1371 aa24.51■■□□□ 1.51
PHLDA3-203ENST00000485436 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
PHLDA3-203ENST00000485436 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms