RNA–Protein interactions for RNA: ENST00000485429.3

RN7SL647P-201, Transcript of RNA, 7SL, cytoplasmic 647, pseudogene, humanhuman

BASIC

Gene RN7SL647P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL647P-201ENST00000485429 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
RN7SL647P-201ENST00000485429 ABCC9O60706 1549 aa17.39■□□□□ 0.37
RN7SL647P-201ENST00000485429 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
RN7SL647P-201ENST00000485429 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
RN7SL647P-201ENST00000485429 NACADO15069 1562 aa16.34■□□□□ 0.21
RN7SL647P-201ENST00000485429 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
RN7SL647P-201ENST00000485429 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
RN7SL647P-201ENST00000485429 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
RN7SL647P-201ENST00000485429 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
RN7SL647P-201ENST00000485429 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
RN7SL647P-201ENST00000485429 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
RN7SL647P-201ENST00000485429 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
RN7SL647P-201ENST00000485429 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
RN7SL647P-201ENST00000485429 SCRIBQ14160 1630 aa15.78■□□□□ 0.12
RN7SL647P-201ENST00000485429 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
RN7SL647P-201ENST00000485429 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
RN7SL647P-201ENST00000485429 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
RN7SL647P-201ENST00000485429 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
RN7SL647P-201ENST00000485429 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
RN7SL647P-201ENST00000485429 ERCC6Q03468 1493 aa15.07■□□□□ 0
RN7SL647P-201ENST00000485429 NCAPD3P42695 1498 aa15.04■□□□□ -0
RN7SL647P-201ENST00000485429 CUX2O14529 1486 aa15.02■□□□□ -0
RN7SL647P-201ENST00000485429 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SL647P-201ENST00000485429 SMARCA4P51532 1647 aa15□□□□□ -0.01
RN7SL647P-201ENST00000485429 SMARCA2P51531 1590 aa15□□□□□ -0.01
RN7SL647P-201ENST00000485429 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
RN7SL647P-201ENST00000485429 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
RN7SL647P-201ENST00000485429 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
RN7SL647P-201ENST00000485429 NESP48681 1621 aa14.88□□□□□ -0.03
RN7SL647P-201ENST00000485429 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
RN7SL647P-201ENST00000485429 THOC2Q8NI27 1593 aaKnown RBP14.79□□□□□ -0.04
RN7SL647P-201ENST00000485429 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
RN7SL647P-201ENST00000485429 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
RN7SL647P-201ENST00000485429 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
RN7SL647P-201ENST00000485429 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
RN7SL647P-201ENST00000485429 WIZO95785 1651 aa14.61□□□□□ -0.07
RN7SL647P-201ENST00000485429 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
RN7SL647P-201ENST00000485429 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
RN7SL647P-201ENST00000485429 WDR62O43379 1518 aa14.54□□□□□ -0.08
RN7SL647P-201ENST00000485429 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
RN7SL647P-201ENST00000485429 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
RN7SL647P-201ENST00000485429 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
RN7SL647P-201ENST00000485429 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
RN7SL647P-201ENST00000485429 CFTRP13569 1480 aa14.4□□□□□ -0.1
RN7SL647P-201ENST00000485429 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
RN7SL647P-201ENST00000485429 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
RN7SL647P-201ENST00000485429 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
RN7SL647P-201ENST00000485429 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
RN7SL647P-201ENST00000485429 CCDC88BA6NC98 1476 aa14.21□□□□□ -0.13
RN7SL647P-201ENST00000485429 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
RN7SL647P-201ENST00000485429 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
RN7SL647P-201ENST00000485429 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
RN7SL647P-201ENST00000485429 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
RN7SL647P-201ENST00000485429 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
RN7SL647P-201ENST00000485429 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
RN7SL647P-201ENST00000485429 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
RN7SL647P-201ENST00000485429 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
RN7SL647P-201ENST00000485429 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
RN7SL647P-201ENST00000485429 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
RN7SL647P-201ENST00000485429 CHD1O14646 1710 aa14.09□□□□□ -0.15
RN7SL647P-201ENST00000485429 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
RN7SL647P-201ENST00000485429 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.16
RN7SL647P-201ENST00000485429 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
RN7SL647P-201ENST00000485429 FBLN2P98095 1184 aa14.01□□□□□ -0.17
RN7SL647P-201ENST00000485429 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
RN7SL647P-201ENST00000485429 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
RN7SL647P-201ENST00000485429 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
RN7SL647P-201ENST00000485429 SOGA1O94964 1423 aa13.94□□□□□ -0.18
RN7SL647P-201ENST00000485429 SNAPC4Q5SXM2 1469 aa13.93□□□□□ -0.18
RN7SL647P-201ENST00000485429 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
RN7SL647P-201ENST00000485429 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
RN7SL647P-201ENST00000485429 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
RN7SL647P-201ENST00000485429 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
RN7SL647P-201ENST00000485429 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
RN7SL647P-201ENST00000485429 CUX1P39880 1505 aa13.89□□□□□ -0.19
RN7SL647P-201ENST00000485429 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
RN7SL647P-201ENST00000485429 CLASP1Q7Z460 1538 aa13.86□□□□□ -0.19
RN7SL647P-201ENST00000485429 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
RN7SL647P-201ENST00000485429 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
RN7SL647P-201ENST00000485429 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
RN7SL647P-201ENST00000485429 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
RN7SL647P-201ENST00000485429 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
RN7SL647P-201ENST00000485429 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
RN7SL647P-201ENST00000485429 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
RN7SL647P-201ENST00000485429 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
RN7SL647P-201ENST00000485429 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
RN7SL647P-201ENST00000485429 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
RN7SL647P-201ENST00000485429 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
RN7SL647P-201ENST00000485429 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
RN7SL647P-201ENST00000485429 CEP170Q5SW79 1584 aa13.65□□□□□ -0.22
RN7SL647P-201ENST00000485429 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
RN7SL647P-201ENST00000485429 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
RN7SL647P-201ENST00000485429 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
RN7SL647P-201ENST00000485429 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
RN7SL647P-201ENST00000485429 NUP160Q12769 1436 aa13.61□□□□□ -0.23
RN7SL647P-201ENST00000485429 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
RN7SL647P-201ENST00000485429 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
RN7SL647P-201ENST00000485429 PRG4Q92954 1404 aaPredicted RBP13.51□□□□□ -0.25
RN7SL647P-201ENST00000485429 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
RN7SL647P-201ENST00000485429 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms