RNA–Protein interactions for RNA: ENST00000485404.1

LINC00870-203, long intergenic non-protein coding RNA 870, humanhuman

TSL 4

Gene LINC00870, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00870-203ENST00000485404 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
LINC00870-203ENST00000485404 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
LINC00870-203ENST00000485404 ABCC9O60706 1549 aa27.06■■□□□ 1.92
LINC00870-203ENST00000485404 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
LINC00870-203ENST00000485404 NACADO15069 1562 aa25.67■■□□□ 1.7
LINC00870-203ENST00000485404 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
LINC00870-203ENST00000485404 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
LINC00870-203ENST00000485404 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
LINC00870-203ENST00000485404 UNC13AQ9UPW8 1703 aa25.23■■□□□ 1.63
LINC00870-203ENST00000485404 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
LINC00870-203ENST00000485404 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
LINC00870-203ENST00000485404 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
LINC00870-203ENST00000485404 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
LINC00870-203ENST00000485404 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
LINC00870-203ENST00000485404 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
LINC00870-203ENST00000485404 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
LINC00870-203ENST00000485404 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
LINC00870-203ENST00000485404 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
LINC00870-203ENST00000485404 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
LINC00870-203ENST00000485404 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
LINC00870-203ENST00000485404 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
LINC00870-203ENST00000485404 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
LINC00870-203ENST00000485404 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
LINC00870-203ENST00000485404 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
LINC00870-203ENST00000485404 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
LINC00870-203ENST00000485404 CUX2O14529 1486 aa23.38■■□□□ 1.33
LINC00870-203ENST00000485404 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
LINC00870-203ENST00000485404 ERCC6Q03468 1493 aa23.35■■□□□ 1.33
LINC00870-203ENST00000485404 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
LINC00870-203ENST00000485404 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
LINC00870-203ENST00000485404 NESP48681 1621 aa23.26■■□□□ 1.31
LINC00870-203ENST00000485404 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
LINC00870-203ENST00000485404 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
LINC00870-203ENST00000485404 WIZO95785 1651 aa23■■□□□ 1.27
LINC00870-203ENST00000485404 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
LINC00870-203ENST00000485404 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
LINC00870-203ENST00000485404 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
LINC00870-203ENST00000485404 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
LINC00870-203ENST00000485404 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
LINC00870-203ENST00000485404 WDR62O43379 1518 aa22.77■■□□□ 1.24
LINC00870-203ENST00000485404 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
LINC00870-203ENST00000485404 CFTRP13569 1480 aa22.73■■□□□ 1.23
LINC00870-203ENST00000485404 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
LINC00870-203ENST00000485404 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
LINC00870-203ENST00000485404 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.19
LINC00870-203ENST00000485404 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
LINC00870-203ENST00000485404 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
LINC00870-203ENST00000485404 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
LINC00870-203ENST00000485404 TOPBP1Q92547 1522 aa22.27■■□□□ 1.16
LINC00870-203ENST00000485404 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
LINC00870-203ENST00000485404 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
LINC00870-203ENST00000485404 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
LINC00870-203ENST00000485404 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
LINC00870-203ENST00000485404 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
LINC00870-203ENST00000485404 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
LINC00870-203ENST00000485404 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
LINC00870-203ENST00000485404 POLA1P09884 1462 aaPredicted RBP22.05■■□□□ 1.12
LINC00870-203ENST00000485404 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
LINC00870-203ENST00000485404 RIMBP3CA6NJZ7 1639 aa21.99■■□□□ 1.11
LINC00870-203ENST00000485404 RIMBP3BA6NNM3 1639 aa21.99■■□□□ 1.11
LINC00870-203ENST00000485404 RIMBP3Q9UFD9 1639 aa21.99■■□□□ 1.11
LINC00870-203ENST00000485404 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
LINC00870-203ENST00000485404 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
LINC00870-203ENST00000485404 SOGA1O94964 1423 aa21.91■■□□□ 1.1
LINC00870-203ENST00000485404 CHD1O14646 1710 aa21.91■■□□□ 1.1
LINC00870-203ENST00000485404 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
LINC00870-203ENST00000485404 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
LINC00870-203ENST00000485404 CUX1P39880 1505 aa21.89■■□□□ 1.09
LINC00870-203ENST00000485404 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
LINC00870-203ENST00000485404 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
LINC00870-203ENST00000485404 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
LINC00870-203ENST00000485404 FBLN2P98095 1184 aa21.76■■□□□ 1.07
LINC00870-203ENST00000485404 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
LINC00870-203ENST00000485404 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
LINC00870-203ENST00000485404 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
LINC00870-203ENST00000485404 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
LINC00870-203ENST00000485404 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
LINC00870-203ENST00000485404 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
LINC00870-203ENST00000485404 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
LINC00870-203ENST00000485404 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
LINC00870-203ENST00000485404 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
LINC00870-203ENST00000485404 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
LINC00870-203ENST00000485404 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
LINC00870-203ENST00000485404 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
LINC00870-203ENST00000485404 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
LINC00870-203ENST00000485404 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
LINC00870-203ENST00000485404 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
LINC00870-203ENST00000485404 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
LINC00870-203ENST00000485404 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
LINC00870-203ENST00000485404 NUP160Q12769 1436 aa21.43■■□□□ 1.02
LINC00870-203ENST00000485404 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
LINC00870-203ENST00000485404 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
LINC00870-203ENST00000485404 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
LINC00870-203ENST00000485404 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
LINC00870-203ENST00000485404 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
LINC00870-203ENST00000485404 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
LINC00870-203ENST00000485404 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
LINC00870-203ENST00000485404 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
LINC00870-203ENST00000485404 JPH4Q96JJ6 628 aa21.14■□□□□ 0.97
LINC00870-203ENST00000485404 IGF1RP08069 1367 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms