RNA–Protein interactions for RNA: ENST00000485262.3

RN7SL843P-201, Transcript of RNA, 7SL, cytoplasmic 843, pseudogene, humanhuman

BASIC

Gene RN7SL843P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL843P-201ENST00000485262 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
RN7SL843P-201ENST00000485262 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
RN7SL843P-201ENST00000485262 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
RN7SL843P-201ENST00000485262 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
RN7SL843P-201ENST00000485262 ABCC9O60706 1549 aa21.23■□□□□ 0.99
RN7SL843P-201ENST00000485262 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
RN7SL843P-201ENST00000485262 NACADO15069 1562 aa20.99■□□□□ 0.95
RN7SL843P-201ENST00000485262 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
RN7SL843P-201ENST00000485262 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
RN7SL843P-201ENST00000485262 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
RN7SL843P-201ENST00000485262 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
RN7SL843P-201ENST00000485262 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
RN7SL843P-201ENST00000485262 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
RN7SL843P-201ENST00000485262 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
RN7SL843P-201ENST00000485262 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
RN7SL843P-201ENST00000485262 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
RN7SL843P-201ENST00000485262 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
RN7SL843P-201ENST00000485262 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
RN7SL843P-201ENST00000485262 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
RN7SL843P-201ENST00000485262 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
RN7SL843P-201ENST00000485262 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
RN7SL843P-201ENST00000485262 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
RN7SL843P-201ENST00000485262 WIZO95785 1651 aa19.39■□□□□ 0.69
RN7SL843P-201ENST00000485262 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
RN7SL843P-201ENST00000485262 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
RN7SL843P-201ENST00000485262 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
RN7SL843P-201ENST00000485262 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
RN7SL843P-201ENST00000485262 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
RN7SL843P-201ENST00000485262 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
RN7SL843P-201ENST00000485262 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
RN7SL843P-201ENST00000485262 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
RN7SL843P-201ENST00000485262 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
RN7SL843P-201ENST00000485262 CFTRP13569 1480 aa18.8■□□□□ 0.6
RN7SL843P-201ENST00000485262 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
RN7SL843P-201ENST00000485262 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
RN7SL843P-201ENST00000485262 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
RN7SL843P-201ENST00000485262 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
RN7SL843P-201ENST00000485262 NESP48681 1621 aa18.53■□□□□ 0.56
RN7SL843P-201ENST00000485262 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
RN7SL843P-201ENST00000485262 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
RN7SL843P-201ENST00000485262 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
RN7SL843P-201ENST00000485262 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
RN7SL843P-201ENST00000485262 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
RN7SL843P-201ENST00000485262 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
RN7SL843P-201ENST00000485262 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
RN7SL843P-201ENST00000485262 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
RN7SL843P-201ENST00000485262 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
RN7SL843P-201ENST00000485262 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
RN7SL843P-201ENST00000485262 CUX1P39880 1505 aa18.35■□□□□ 0.53
RN7SL843P-201ENST00000485262 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
RN7SL843P-201ENST00000485262 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
RN7SL843P-201ENST00000485262 ERCC6Q03468 1493 aa18.32■□□□□ 0.52
RN7SL843P-201ENST00000485262 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
RN7SL843P-201ENST00000485262 WDR62O43379 1518 aa18.28■□□□□ 0.52
RN7SL843P-201ENST00000485262 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
RN7SL843P-201ENST00000485262 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
RN7SL843P-201ENST00000485262 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
RN7SL843P-201ENST00000485262 EEA1Q15075 1411 aa18.19■□□□□ 0.5
RN7SL843P-201ENST00000485262 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
RN7SL843P-201ENST00000485262 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
RN7SL843P-201ENST00000485262 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
RN7SL843P-201ENST00000485262 IFT140Q96RY7 1462 aa18.08■□□□□ 0.49
RN7SL843P-201ENST00000485262 SOGA1O94964 1423 aa18.08■□□□□ 0.49
RN7SL843P-201ENST00000485262 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.48
RN7SL843P-201ENST00000485262 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
RN7SL843P-201ENST00000485262 CUX2O14529 1486 aa18.06■□□□□ 0.48
RN7SL843P-201ENST00000485262 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
RN7SL843P-201ENST00000485262 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
RN7SL843P-201ENST00000485262 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
RN7SL843P-201ENST00000485262 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
RN7SL843P-201ENST00000485262 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
RN7SL843P-201ENST00000485262 KIF21BO75037 1637 aa17.91■□□□□ 0.46
RN7SL843P-201ENST00000485262 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
RN7SL843P-201ENST00000485262 CUL7Q14999 1698 aa17.9■□□□□ 0.46
RN7SL843P-201ENST00000485262 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
RN7SL843P-201ENST00000485262 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
RN7SL843P-201ENST00000485262 IGF1RP08069 1367 aa17.86■□□□□ 0.45
RN7SL843P-201ENST00000485262 GRIN2BQ13224 1484 aa17.86■□□□□ 0.45
RN7SL843P-201ENST00000485262 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
RN7SL843P-201ENST00000485262 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
RN7SL843P-201ENST00000485262 ZNF608Q9ULD9 1512 aaPredicted RBP17.83■□□□□ 0.45
RN7SL843P-201ENST00000485262 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
RN7SL843P-201ENST00000485262 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
RN7SL843P-201ENST00000485262 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
RN7SL843P-201ENST00000485262 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
RN7SL843P-201ENST00000485262 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
RN7SL843P-201ENST00000485262 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
RN7SL843P-201ENST00000485262 ADAMTS12P58397 1594 aa17.77■□□□□ 0.44
RN7SL843P-201ENST00000485262 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
RN7SL843P-201ENST00000485262 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
RN7SL843P-201ENST00000485262 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
RN7SL843P-201ENST00000485262 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
RN7SL843P-201ENST00000485262 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
RN7SL843P-201ENST00000485262 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
RN7SL843P-201ENST00000485262 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
RN7SL843P-201ENST00000485262 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
RN7SL843P-201ENST00000485262 NUP160Q12769 1436 aa17.55■□□□□ 0.4
RN7SL843P-201ENST00000485262 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
RN7SL843P-201ENST00000485262 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
RN7SL843P-201ENST00000485262 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms