RNA–Protein interactions for RNA: ENST00000485110.5

KNDC1-204, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

TSL 2

Gene KNDC1, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-204ENST00000485110 NISCHQ9Y2I1 1504 aa41.56■■■■■ 4.24
KNDC1-204ENST00000485110 CCDC180Q9P1Z9 1646 aa37.26■■■■□ 3.56
KNDC1-204ENST00000485110 ABCC9O60706 1549 aa36.62■■■■□ 3.45
KNDC1-204ENST00000485110 RB1CC1Q8TDY2 1594 aa35.18■■■■□ 3.22
KNDC1-204ENST00000485110 NACADO15069 1562 aa35.04■■■■□ 3.2
KNDC1-204ENST00000485110 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
KNDC1-204ENST00000485110 DCAF8L2P0C7V8 631 aa34.72■■■■□ 3.15
KNDC1-204ENST00000485110 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
KNDC1-204ENST00000485110 DCAF1Q9Y4B6 1507 aa34.43■■■■□ 3.1
KNDC1-204ENST00000485110 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
KNDC1-204ENST00000485110 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
KNDC1-204ENST00000485110 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.04
KNDC1-204ENST00000485110 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
KNDC1-204ENST00000485110 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
KNDC1-204ENST00000485110 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
KNDC1-204ENST00000485110 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
KNDC1-204ENST00000485110 CC2D2AQ9P2K1 1620 aa33.18■■■□□ 2.9
KNDC1-204ENST00000485110 CECR2Q9BXF3 1484 aa32.97■■■□□ 2.87
KNDC1-204ENST00000485110 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
KNDC1-204ENST00000485110 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
KNDC1-204ENST00000485110 NCAPD3P42695 1498 aa32.27■■■□□ 2.76
KNDC1-204ENST00000485110 SMARCA2P51531 1590 aa32.25■■■□□ 2.75
KNDC1-204ENST00000485110 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
KNDC1-204ENST00000485110 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
KNDC1-204ENST00000485110 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
KNDC1-204ENST00000485110 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
KNDC1-204ENST00000485110 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
KNDC1-204ENST00000485110 WIZO95785 1651 aa31.67■■■□□ 2.66
KNDC1-204ENST00000485110 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
KNDC1-204ENST00000485110 NESP48681 1621 aa31.57■■■□□ 2.64
KNDC1-204ENST00000485110 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
KNDC1-204ENST00000485110 CUX2O14529 1486 aa31.47■■■□□ 2.63
KNDC1-204ENST00000485110 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
KNDC1-204ENST00000485110 TOP2AP11388 1531 aaKnown RBP31.35■■■□□ 2.61
KNDC1-204ENST00000485110 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
KNDC1-204ENST00000485110 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
KNDC1-204ENST00000485110 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
KNDC1-204ENST00000485110 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
KNDC1-204ENST00000485110 CFTRP13569 1480 aa31.05■■■□□ 2.56
KNDC1-204ENST00000485110 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.56
KNDC1-204ENST00000485110 CEP164Q9UPV0 1460 aa31■■■□□ 2.55
KNDC1-204ENST00000485110 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
KNDC1-204ENST00000485110 FANCD2Q9BXW9 1451 aa30.96■■■□□ 2.55
KNDC1-204ENST00000485110 WDR62O43379 1518 aa30.95■■■□□ 2.55
KNDC1-204ENST00000485110 CCDC88BA6NC98 1476 aa30.89■■■□□ 2.54
KNDC1-204ENST00000485110 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
KNDC1-204ENST00000485110 URB2Q14146 1524 aaKnown RBP30.66■■■□□ 2.5
KNDC1-204ENST00000485110 ABCC8Q09428 1581 aa30.45■■■□□ 2.47
KNDC1-204ENST00000485110 TOPBP1Q92547 1522 aa30.43■■■□□ 2.46
KNDC1-204ENST00000485110 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
KNDC1-204ENST00000485110 IFT140Q96RY7 1462 aa30.34■■■□□ 2.45
KNDC1-204ENST00000485110 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
KNDC1-204ENST00000485110 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
KNDC1-204ENST00000485110 TARBP1Q13395 1621 aaKnown RBP30.16■■■□□ 2.42
KNDC1-204ENST00000485110 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
KNDC1-204ENST00000485110 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
KNDC1-204ENST00000485110 CUX1P39880 1505 aa30.06■■■□□ 2.4
KNDC1-204ENST00000485110 FGD5Q6ZNL6 1462 aa30.02■■■□□ 2.4
KNDC1-204ENST00000485110 WDR97A6NE52 1622 aa30■■■□□ 2.39
KNDC1-204ENST00000485110 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
KNDC1-204ENST00000485110 SOGA1O94964 1423 aa29.97■■■□□ 2.39
KNDC1-204ENST00000485110 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
KNDC1-204ENST00000485110 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.38
KNDC1-204ENST00000485110 CHD1O14646 1710 aa29.88■■■□□ 2.37
KNDC1-204ENST00000485110 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
KNDC1-204ENST00000485110 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
KNDC1-204ENST00000485110 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
KNDC1-204ENST00000485110 PBRM1Q86U86 1689 aa29.74■■■□□ 2.35
KNDC1-204ENST00000485110 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.35
KNDC1-204ENST00000485110 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
KNDC1-204ENST00000485110 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
KNDC1-204ENST00000485110 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
KNDC1-204ENST00000485110 MAGI1Q96QZ7 1491 aaPredicted RBP29.71■■■□□ 2.35
KNDC1-204ENST00000485110 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
KNDC1-204ENST00000485110 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
KNDC1-204ENST00000485110 RIMBP3CA6NJZ7 1639 aa29.66■■■□□ 2.34
KNDC1-204ENST00000485110 RIMBP3BA6NNM3 1639 aa29.66■■■□□ 2.34
KNDC1-204ENST00000485110 RIMBP3Q9UFD9 1639 aa29.66■■■□□ 2.34
KNDC1-204ENST00000485110 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
KNDC1-204ENST00000485110 FBLN2P98095 1184 aa29.63■■■□□ 2.33
KNDC1-204ENST00000485110 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
KNDC1-204ENST00000485110 ARHGEF11O15085 1522 aa29.59■■■□□ 2.33
KNDC1-204ENST00000485110 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
KNDC1-204ENST00000485110 CHMP7Q8WUX9 453 aaPredicted RBP29.52■■■□□ 2.32
KNDC1-204ENST00000485110 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
KNDC1-204ENST00000485110 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
KNDC1-204ENST00000485110 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
KNDC1-204ENST00000485110 GRIN2AQ12879 1464 aa29.34■■■□□ 2.29
KNDC1-204ENST00000485110 ARAP1Q96P48 1450 aa29.3■■■□□ 2.28
KNDC1-204ENST00000485110 FHAD1B1AJZ9 1412 aa29.3■■■□□ 2.28
KNDC1-204ENST00000485110 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
KNDC1-204ENST00000485110 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
KNDC1-204ENST00000485110 NUP160Q12769 1436 aa29.21■■■□□ 2.27
KNDC1-204ENST00000485110 KIF27Q86VH2 1401 aa29.14■■■□□ 2.26
KNDC1-204ENST00000485110 CUL7Q14999 1698 aa29.12■■■□□ 2.25
KNDC1-204ENST00000485110 SHROOM2Q13796 1616 aa29.1■■■□□ 2.25
KNDC1-204ENST00000485110 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
KNDC1-204ENST00000485110 IGF1RP08069 1367 aa28.99■■■□□ 2.23
KNDC1-204ENST00000485110 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
KNDC1-204ENST00000485110 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms