RNA–Protein interactions for RNA: ENST00000484989.1

PARP4-203, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

TSL 3

Gene PARP4, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-203ENST00000484989 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
PARP4-203ENST00000484989 ABCC9O60706 1549 aa29.15■■■□□ 2.26
PARP4-203ENST00000484989 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
PARP4-203ENST00000484989 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
PARP4-203ENST00000484989 NACADO15069 1562 aa27.53■■■□□ 2
PARP4-203ENST00000484989 DCAF8L2P0C7V8 631 aa27.51■■□□□ 1.99
PARP4-203ENST00000484989 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
PARP4-203ENST00000484989 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
PARP4-203ENST00000484989 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
PARP4-203ENST00000484989 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
PARP4-203ENST00000484989 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
PARP4-203ENST00000484989 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
PARP4-203ENST00000484989 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
PARP4-203ENST00000484989 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
PARP4-203ENST00000484989 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
PARP4-203ENST00000484989 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
PARP4-203ENST00000484989 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
PARP4-203ENST00000484989 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
PARP4-203ENST00000484989 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
PARP4-203ENST00000484989 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
PARP4-203ENST00000484989 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
PARP4-203ENST00000484989 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
PARP4-203ENST00000484989 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
PARP4-203ENST00000484989 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
PARP4-203ENST00000484989 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
PARP4-203ENST00000484989 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
PARP4-203ENST00000484989 CUX2O14529 1486 aa25.12■■□□□ 1.61
PARP4-203ENST00000484989 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
PARP4-203ENST00000484989 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
PARP4-203ENST00000484989 NESP48681 1621 aa25.01■■□□□ 1.59
PARP4-203ENST00000484989 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
PARP4-203ENST00000484989 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
PARP4-203ENST00000484989 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
PARP4-203ENST00000484989 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
PARP4-203ENST00000484989 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
PARP4-203ENST00000484989 WIZO95785 1651 aa24.63■■□□□ 1.53
PARP4-203ENST00000484989 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
PARP4-203ENST00000484989 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
PARP4-203ENST00000484989 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
PARP4-203ENST00000484989 WDR62O43379 1518 aa24.4■■□□□ 1.5
PARP4-203ENST00000484989 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
PARP4-203ENST00000484989 CFTRP13569 1480 aa24.39■■□□□ 1.5
PARP4-203ENST00000484989 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
PARP4-203ENST00000484989 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
PARP4-203ENST00000484989 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
PARP4-203ENST00000484989 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
PARP4-203ENST00000484989 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
PARP4-203ENST00000484989 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
PARP4-203ENST00000484989 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
PARP4-203ENST00000484989 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
PARP4-203ENST00000484989 TOPBP1Q92547 1522 aa23.91■■□□□ 1.42
PARP4-203ENST00000484989 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
PARP4-203ENST00000484989 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
PARP4-203ENST00000484989 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
PARP4-203ENST00000484989 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
PARP4-203ENST00000484989 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
PARP4-203ENST00000484989 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
PARP4-203ENST00000484989 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
PARP4-203ENST00000484989 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PARP4-203ENST00000484989 FBLN2P98095 1184 aa23.6■■□□□ 1.37
PARP4-203ENST00000484989 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
PARP4-203ENST00000484989 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
PARP4-203ENST00000484989 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
PARP4-203ENST00000484989 RAD54L2Q9Y4B4 1467 aa23.59■■□□□ 1.37
PARP4-203ENST00000484989 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
PARP4-203ENST00000484989 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
PARP4-203ENST00000484989 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
PARP4-203ENST00000484989 CYB5RLQ6IPT4 315 aa23.5■■□□□ 1.35
PARP4-203ENST00000484989 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
PARP4-203ENST00000484989 CUX1P39880 1505 aa23.49■■□□□ 1.35
PARP4-203ENST00000484989 CHD1O14646 1710 aa23.45■■□□□ 1.34
PARP4-203ENST00000484989 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
PARP4-203ENST00000484989 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
PARP4-203ENST00000484989 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
PARP4-203ENST00000484989 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
PARP4-203ENST00000484989 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
PARP4-203ENST00000484989 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
PARP4-203ENST00000484989 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
PARP4-203ENST00000484989 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
PARP4-203ENST00000484989 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
PARP4-203ENST00000484989 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
PARP4-203ENST00000484989 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
PARP4-203ENST00000484989 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
PARP4-203ENST00000484989 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
PARP4-203ENST00000484989 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
PARP4-203ENST00000484989 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
PARP4-203ENST00000484989 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
PARP4-203ENST00000484989 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
PARP4-203ENST00000484989 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
PARP4-203ENST00000484989 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
PARP4-203ENST00000484989 NUP160Q12769 1436 aa22.99■■□□□ 1.27
PARP4-203ENST00000484989 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
PARP4-203ENST00000484989 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
PARP4-203ENST00000484989 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
PARP4-203ENST00000484989 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
PARP4-203ENST00000484989 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
PARP4-203ENST00000484989 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
PARP4-203ENST00000484989 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
PARP4-203ENST00000484989 IGF1RP08069 1367 aa22.74■■□□□ 1.23
PARP4-203ENST00000484989 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms